Detailed information    

insolico Bioinformatically predicted

Overview


Name   cinA   Type   Machinery gene
Locus tag   ELZ60_RS08265 Genome accession   NZ_LR134090
Coordinates   1649556..1650707 (-) Length   383 a.a.
NCBI ID   WP_000020352.1    Uniprot ID   -
Organism   Staphylococcus aureus strain NCTC9555     
Function   unknown (predicted from homology)   
Unclear

Genomic Context


Location: 1644556..1655707
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ELZ60_RS08245 (NCTC9555_01554) - 1644952..1645749 (-) 798 WP_001222105.1 TIGR00282 family metallophosphoesterase -
  ELZ60_RS08250 (NCTC9555_01555) - 1645923..1646138 (+) 216 WP_000026308.1 hypothetical protein -
  ELZ60_RS08255 (NCTC9555_01556) rny 1646435..1647994 (-) 1560 WP_001050913.1 ribonuclease Y -
  ELZ60_RS08260 (NCTC9555_01557) recA 1648348..1649391 (-) 1044 WP_000368166.1 recombinase RecA Machinery gene
  ELZ60_RS08265 (NCTC9555_01558) cinA 1649556..1650707 (-) 1152 WP_000020352.1 CinA family nicotinamide mononucleotide deamidase-related protein Machinery gene
  ELZ60_RS08270 (NCTC9555_01559) pgsA 1650934..1651512 (-) 579 WP_126509048.1 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase -
  ELZ60_RS08275 (NCTC9555_01560) - 1651546..1651938 (-) 393 WP_000859443.1 helix-turn-helix domain-containing protein -
  ELZ60_RS08280 (NCTC9555_01561) - 1651957..1652784 (-) 828 WP_000214889.1 YmfK family protein -
  ELZ60_RS08285 (NCTC9555_01562) ymfI 1652889..1653593 (-) 705 WP_000646222.1 elongation factor P 5-aminopentanone reductase -
  ELZ60_RS08290 (NCTC9555_01563) yfmH 1653593..1654879 (-) 1287 WP_000664769.1 EF-P 5-aminopentanol modification-associated protein YfmH -

Sequence


Protein


Download         Length: 383 a.a.        Molecular weight: 43203.55 Da        Isoelectric Point: 6.3213

>NTDB_id=997403 ELZ60_RS08265 WP_000020352.1 1649556..1650707(-) (cinA) [Staphylococcus aureus strain NCTC9555]
MSIAIIAVGSELLLGQIANTNGQFLSKVFNEIGQNVLEHKVIGDNKKRLESSVRHALEKYDTVILTGGLGPTKDDLTKHT
VAQIVGKDLVIDEPSLKYIESYFEEQGQEMTPNNKQQALVIEGSTVLANHHGMAPGMMVNFENKQIILLPGPPKEMQPMV
KNELLSHFINHNRIIHSELLRFAGIGESKVETVLIDLIDKQTNPTIAPLAGSHEVYIRLTANADSKEQAQSLIQPVKQEI
LDRIGEYYYGSDDTLIEQAVIKKIHEPFVIYDGITNGALYHRLKEVDLNDVLKGMINHNEKFVDINKPIEQQLKDAVQFV
NKLFNVSSAIILLEYDGVVHIGYDNNLEFKTEQFKMSKSRNLLKNRSQNYALIRLLNWLRTTN

Nucleotide


Download         Length: 1152 bp        

>NTDB_id=997403 ELZ60_RS08265 WP_000020352.1 1649556..1650707(-) (cinA) [Staphylococcus aureus strain NCTC9555]
ATGTCAATTGCCATTATTGCTGTAGGCTCAGAACTATTGCTAGGTCAAATCGCTAATACCAATGGACAATTTCTATCTAA
AGTATTTAATGAAATTGGACAAAATGTATTAGAACATAAAGTTATTGGAGATAATAAAAAACGTTTAGAATCAAGTGTAC
GTCATGCGTTAGAAAAATATGATACTGTTATTTTAACAGGTGGCTTAGGTCCTACGAAAGATGACTTAACGAAGCATACA
GTGGCCCAGATTGTTGGTAAAGATTTAGTTATTGATGAGCCTTCTTTAAAATATATTGAAAGCTATTTTGAGGAACAAGG
ACAAGAAATGACACCTAATAATAAACAACAGGCTTTAGTAATTGAAGGTTCAACTGTATTAGCAAATCATCATGGCATGG
CTCCAGGAATGATGGTGAATTTTGAAAACAAACAAATTATTTTATTACCAGGTCCACCGAAAGAAATGCAACCAATGGTA
AAAAATGAATTGTTGTCACATTTTATAAACCATAATCGAATTATACACTCTGAACTATTAAGATTTGCGGGAATAGGTGA
ATCTAAAGTAGAAACAGTATTAATAGATCTTATCGATAAACAGACTAATCCTACGATTGCGCCTTTGGCAGGAAGTCATG
AAGTATATATTAGATTGACTGCAAATGCCGACTCAAAAGAACAAGCACAATCATTGATTCAACCTGTTAAGCAAGAAATT
CTTGATCGTATTGGAGAATATTATTATGGTTCAGATGACACATTAATTGAGCAAGCTGTAATAAAGAAAATTCATGAACC
TTTTGTAATATATGATGGTATTACTAATGGTGCGTTATATCATCGATTGAAAGAAGTGGATTTAAACGATGTTCTAAAGG
GTATGATTAATCACAATGAAAAATTTGTTGATATTAATAAACCTATTGAGCAGCAATTAAAAGATGCAGTGCAATTTGTT
AATAAATTATTTAATGTGTCATCAGCAATTATTCTATTAGAGTATGATGGTGTAGTCCATATAGGCTATGATAATAACTT
AGAATTTAAAACTGAGCAATTTAAAATGTCTAAATCTAGAAATTTATTAAAGAACAGAAGTCAAAATTATGCGCTTATAA
GATTATTAAATTGGCTTAGAACAACAAATTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  cinA Bacillus subtilis subsp. subtilis str. 168

40.389

100

0.433