Detailed information    

insolico Bioinformatically predicted

Overview


Name   pilG   Type   Regulator
Locus tag   GZH91_RS15775 Genome accession   NZ_AP021884
Coordinates   3070532..3070897 (+) Length   121 a.a.
NCBI ID   WP_371860378.1    Uniprot ID   -
Organism   Sulfuriferula plumbiphila strain Gro7     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context


Location: 3065532..3075897
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GZH91_RS18465 (SFPGR_31230) - 3065570..3065878 (-) 309 WP_408646874.1 chaperone modulator CbpM -
  GZH91_RS15745 (SFPGR_31240) - 3065875..3066807 (-) 933 WP_147074226.1 DnaJ C-terminal domain-containing protein -
  GZH91_RS15750 (SFPGR_31250) grxD 3067016..3067321 (+) 306 WP_147074224.1 Grx4 family monothiol glutaredoxin -
  GZH91_RS15755 (SFPGR_31260) hemL 3067380..3068663 (-) 1284 WP_147074222.1 glutamate-1-semialdehyde 2,1-aminomutase -
  GZH91_RS15760 (SFPGR_31270) thiE 3068669..3069295 (-) 627 WP_147074220.1 thiamine phosphate synthase -
  GZH91_RS15765 (SFPGR_31280) thiD 3069292..3070116 (-) 825 WP_147074218.1 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase -
  GZH91_RS15770 (SFPGR_31290) - 3070194..3070370 (+) 177 WP_147074216.1 rubredoxin -
  GZH91_RS15775 (SFPGR_31300) pilG 3070532..3070897 (+) 366 WP_371860378.1 PleD family two-component system response regulator Regulator
  GZH91_RS15780 (SFPGR_31310) - 3070919..3071281 (+) 363 WP_147074213.1 PleD family two-component system response regulator -
  GZH91_RS15785 (SFPGR_31320) - 3071313..3071825 (+) 513 WP_147074211.1 chemotaxis protein CheW -
  GZH91_RS15790 (SFPGR_31330) - 3071882..3074023 (+) 2142 WP_147074209.1 methyl-accepting chemotaxis protein -

Sequence


Protein


Download         Length: 121 a.a.        Molecular weight: 13431.50 Da        Isoelectric Point: 7.2435

>NTDB_id=75277 GZH91_RS15775 WP_371860378.1 3070532..3070897(+) (pilG) [Sulfuriferula plumbiphila strain Gro7]
MVIDDSNTIRRSAEIFLNQAGCQVILAEDGFDALAKITEHLPDVVFVDIMMPRLDGYQTCSLIKKNARFSATPVVMLSSK
DGLFDKARGRMVGSNEYLTKPFTKDTLLTAVQRHTTQHLAA

Nucleotide


Download         Length: 366 bp        

>NTDB_id=75277 GZH91_RS15775 WP_371860378.1 3070532..3070897(+) (pilG) [Sulfuriferula plumbiphila strain Gro7]
ATGGTGATTGATGACAGCAACACAATCCGCCGTAGCGCAGAAATTTTTCTCAATCAGGCCGGCTGTCAGGTCATTCTCGC
CGAAGATGGCTTTGACGCGTTGGCCAAAATCACCGAGCATCTGCCCGATGTGGTTTTCGTGGACATCATGATGCCGCGCC
TGGATGGCTACCAGACCTGCTCGCTGATCAAGAAAAACGCCCGTTTCAGCGCCACGCCGGTGGTCATGCTGTCAAGCAAG
GACGGCCTGTTCGACAAGGCGCGCGGGCGCATGGTCGGCTCCAACGAATACCTGACCAAACCATTTACCAAAGATACCCT
GTTGACTGCAGTACAACGCCACACCACCCAGCACTTAGCTGCCTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

67.241

95.868

0.645

  vicR Streptococcus mutans UA159

38.596

94.215

0.364


Multiple sequence alignment