Detailed information NTG0585721

Bioinformatically predicted

Overview

• Name: comE
• Type: Machinery gene
• Locus tag: KTR69_RS15840
• Genome accession: NZ_CP077960
• Coordinates: 1453512..1453670 (+)
• Length: 52 a.a.
• NCBI ID: WP_256934149.1
• Uniprot ID: -
• Organism: Mammaliicoccus sciuri strain WHA07
• Function: DNA binding (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1448512..1458670

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KTR69_RS07295	yqeH	1448545..1449645 (+)	1101	WP_049318740.1	ribosome biogenesis GTPase YqeH	-
KTR69_RS07300	aroE	1449658..1450476 (+)	819	WP_070373294.1	shikimate dehydrogenase	-
KTR69_RS07305	yhbY	1450470..1450760 (+)	291	WP_049318742.1	ribosome assembly RNA-binding protein YhbY	-
KTR69_RS07310	nadD	1450765..1451337 (+)	573	WP_058611648.1	nicotinate (nicotinamide) nucleotide adenylyltransferase	-
KTR69_RS07315	yqeK	1451327..1451899 (+)	573	WP_070373295.1	bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK	-
KTR69_RS07320	rsfS	1451912..1452265 (+)	354	WP_048539678.1	ribosome silencing factor	-
KTR69_RS07325	-	1452262..1452981 (+)	720	WP_370688586.1	class I SAM-dependent methyltransferase	-
KTR69_RS07330	-	1453024..1453479 (+)	456	WP_256934145.1	hypothetical protein	-
KTR69_RS15840	comE	1453512..1453670 (+)	159	WP_256934149.1	helix-hairpin-helix domain-containing protein	Machinery gene
KTR69_RS07335	-	1453731..1454186 (+)	456	WP_037588364.1	ComE operon protein 2	-
KTR69_RS07340	-	1454202..1456514 (+)	2313	WP_218697431.1	DNA internalization-related competence protein ComEC/Rec2	-
KTR69_RS07345	-	1456550..1456687 (-)	138	WP_075577996.1	YqzM family protein	-
KTR69_RS07350	holA	1456779..1457753 (+)	975	WP_058611643.1	DNA polymerase III subunit delta	-
KTR69_RS07355	rpsT	1457827..1458078 (-)	252	WP_025904213.1	30S ribosomal protein S20	-

Sequence

Protein

• Length: 52 a.a.
• Molecular weight: 5784.67 Da
• Isoelectric Point: 6.2456

>NTDB_id=585721 KTR69_RS15840 WP_256934149.1 1453512..1453670(+) (comE) [Mammaliicoccus sciuri strain WHA07]
MEKLPGIGPSKADAILQYRETNGEFKTVDDLKKVKGFGDKTVESLKDFIVLN

Nucleotide

• Length: 159 bp

>NTDB_id=585721 KTR69_RS15840 WP_256934149.1 1453512..1453670(+) (comE) [Mammaliicoccus sciuri strain WHA07]
ATTGAAAAGTTACCCGGTATCGGTCCGAGTAAAGCAGATGCCATTCTTCAATATAGAGAAACAAACGGAGAATTTAAAAC
TGTGGATGATTTGAAGAAAGTTAAAGGATTTGGAGATAAAACAGTCGAAAGTTTAAAAGACTTTATCGTTTTAAATTGA

Domains

Predicted by InterproScan.

• Helix-hairpin-helix motif (HHH_3) (2-49)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comE	Neisseria gonorrhoeae MS11	61.702	90.385	0.558
comE	Neisseria gonorrhoeae MS11	61.702	90.385	0.558
comE	Neisseria gonorrhoeae MS11	61.702	90.385	0.558
comE	Neisseria gonorrhoeae MS11	61.702	90.385	0.558
comEA	Lactococcus lactis subsp. cremoris KW2	53.846	100	0.538
comEA	Latilactobacillus sakei subsp. sakei 23K	48.077	100	0.481
comEA/comE1	Glaesserella parasuis strain SC1401	50	96.154	0.481
comEA	Vibrio cholerae strain A1552	52.083	92.308	0.481
comEA	Vibrio campbellii strain DS40M4	52.083	92.308	0.481
comEA	Staphylococcus aureus MW2	52.083	92.308	0.481
comEA	Staphylococcus aureus N315	52.083	92.308	0.481
comEA	Vibrio cholerae C6706	52.083	92.308	0.481
Cj0011c	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	53.191	90.385	0.481
comEA	Bacillus subtilis subsp. subtilis str. 168	47.059	98.077	0.462
comEA/celA/cilE	Streptococcus mitis SK321	46.154	100	0.462
comEA/celA/cilE	Streptococcus pneumoniae TIGR4	46.154	100	0.462
comEA/celA/cilE	Streptococcus mitis NCTC 12261	46.154	100	0.462
comEA/celA/cilE	Streptococcus pneumoniae D39	46.154	100	0.462
comEA/celA/cilE	Streptococcus pneumoniae Rx1	46.154	100	0.462
comEA/celA/cilE	Streptococcus pneumoniae R6	46.154	100	0.462
comEA	Vibrio parahaemolyticus RIMD 2210633	47.917	92.308	0.442
comEA	Acinetobacter baumannii D1279779	46	96.154	0.442
comEA	Legionella pneumophila strain ERS1305867	45.098	98.077	0.442
comEA	Acinetobacter baylyi ADP1	45.098	98.077	0.442
comEA	Legionella pneumophila str. Paris	45.098	98.077	0.442
comEA	Acinetobacter baumannii strain A118	44	96.154	0.423
comE1/comEA	Haemophilus influenzae Rd KW20	45.833	92.308	0.423
comA	Synechocystis sp. PCC 6803	45.652	88.462	0.404
comEA	Streptococcus thermophilus LMD-9	42.553	90.385	0.385
comEA	Thermus thermophilus HB27	43.478	88.462	0.385