Detailed information NTG0477871

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: H9L41_RS26000
• Genome accession: NZ_CP060704
• Coordinates: 809773..809955 (+)
• Length: 60 a.a.
• NCBI ID: WP_028445662.1
• Uniprot ID: -
• Organism: Chitinimonas koreensis strain R2A43-10
• Function: type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake

Genomic Context

Location: 804773..814955

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
H9L41_RS03390 (H9L41_03390)	-	805144..806241 (-)	1098	WP_028445659.1	DegT/DnrJ/EryC1/StrS aminotransferase family protein	-
H9L41_RS03395 (H9L41_03395)	-	806238..806816 (-)	579	WP_051318881.1	acyltransferase	-
H9L41_RS03400 (H9L41_03400)	-	806813..807847 (-)	1035	WP_308417303.1	Gfo/Idh/MocA family oxidoreductase	-
H9L41_RS03405 (H9L41_03405)	-	807859..809163 (-)	1305	WP_028445660.1	nucleotide sugar dehydrogenase	-
H9L41_RS03410 (H9L41_03410)	-	809339..809686 (+)	348	WP_028445661.1	hypothetical protein	-
H9L41_RS26000 (H9L41_03415)	pilA	809773..809955 (+)	183	WP_028445662.1	prepilin-type N-terminal cleavage/methylation domain-containing protein	Machinery gene
H9L41_RS03420 (H9L41_03420)	-	810042..810395 (+)	354	WP_028445663.1	hypothetical protein	-
H9L41_RS03425 (H9L41_03425)	-	810567..811379 (+)	813	WP_028445664.1	ABC transporter permease	-
H9L41_RS03430 (H9L41_03430)	-	811410..814916 (+)	3507	WP_084300064.1	tetratricopeptide repeat protein	-

Sequence

Protein

• Length: 60 a.a.
• Molecular weight: 6450.56 Da
• Isoelectric Point: 9.9318

>NTDB_id=477871 H9L41_RS26000 WP_028445662.1 809773..809955(+) (pilA) [Chitinimonas koreensis strain R2A43-10]
MKQLQKGFTLIELMIVVAIIGILAAIAIPQFSEYQKKSQDKAAQADARNFLTQAVANSGG

Nucleotide

• Length: 183 bp

>NTDB_id=477871 H9L41_RS26000 WP_028445662.1 809773..809955(+) (pilA) [Chitinimonas koreensis strain R2A43-10]
ATGAAGCAACTGCAAAAGGGCTTTACCCTGATCGAGCTGATGATCGTCGTCGCGATCATCGGTATCCTGGCCGCGATTGC
GATCCCGCAATTCAGCGAATACCAGAAGAAGAGCCAGGACAAGGCCGCCCAGGCCGATGCCCGCAACTTCCTGACCCAGG
CCGTGGCGAACTCGGGCGGCTAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (5-28)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Pseudomonas aeruginosa PAK	64.583	80	0.517
pilA	Ralstonia pseudosolanacearum GMI1000	60.784	85	0.517
pilA/pilAI	Pseudomonas stutzeri DSM 10701	68.182	73.333	0.5
pilA	Acinetobacter baumannii strain A118	85.714	58.333	0.5
comP	Acinetobacter baylyi ADP1	50	96.667	0.483
pilA	Acinetobacter nosocomialis M2	82.857	58.333	0.483
pilA	Vibrio cholerae O1 biovar El Tor strain E7946	82.353	56.667	0.467
pilA	Vibrio cholerae strain A1552	82.353	56.667	0.467
pilA	Vibrio cholerae C6706	82.353	56.667	0.467
pilV	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	53.846	86.667	0.467
pilE	Neisseria elongata subsp. glycolytica ATCC 29315	69.231	65	0.45
pilA	Vibrio parahaemolyticus RIMD 2210633	54	83.333	0.45
pilA	Vibrio campbellii strain DS40M4	76.471	56.667	0.433
pilA/pilA1	Eikenella corrodens VA1	66.667	65	0.433
pilA/pilAII	Pseudomonas stutzeri DSM 10701	56.522	76.667	0.433
pilE	Neisseria gonorrhoeae strain FA1090	64.103	65	0.417
pilE	Neisseria gonorrhoeae MS11	64.103	65	0.417
pilA	Haemophilus influenzae 86-028NP	71.429	58.333	0.417
comE	Acinetobacter baylyi ADP1	54.348	76.667	0.417
pilE	Acinetobacter baumannii D1279779	54.348	76.667	0.417
pilA	Haemophilus influenzae Rd KW20	65.789	63.333	0.417
comF	Acinetobacter baylyi ADP1	54.545	73.333	0.4
pilA	Glaesserella parasuis strain SC1401	60.526	63.333	0.383
pilX	Neisseria meningitidis 8013	66.667	55	0.367
pilL	Neisseria gonorrhoeae MS11	66.667	55	0.367
pilE	Legionella pneumophila strain ERS1305867	44.898	81.667	0.367
pilE	Legionella pneumophila str. Paris	44.898	81.667	0.367