Detailed information NTG0037803

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: HPF30_RS05910
• Genome accession: NC_017365
• Coordinates: 1212740..1213783 (-)
• Length: 347 a.a.
• NCBI ID: WP_000963126.1
• Uniprot ID: -
• Organism: Helicobacter pylori F30
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1207740..1218783

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HPF30_RS05880 (HPF30_1136)	-	1207982..1209100 (+)	1119	WP_000028818.1	glycosyltransferase family 8 protein	-
HPF30_RS05885 (HPF30_1137)	-	1209097..1210053 (-)	957	WP_000952288.1	PDC sensor domain-containing protein	-
HPF30_RS05890 (HPF30_1138)	-	1210075..1210563 (-)	489	WP_001216271.1	shikimate kinase	-
HPF30_RS05895 (HPF30_1139)	-	1210568..1211164 (-)	597	WP_001868216.1	AMIN domain-containing protein	-
HPF30_RS05900 (HPF30_1140)	-	1211180..1211455 (-)	276	WP_000146214.1	hypothetical protein	-
HPF30_RS05905 (HPF30_1141)	eno	1211448..1212728 (-)	1281	WP_000955615.1	phosphopyruvate hydratase	-
HPF30_RS05910 (HPF30_1142)	recA	1212740..1213783 (-)	1044	WP_000963126.1	recombinase RecA	Machinery gene
HPF30_RS05915 (HPF30_1143)	-	1213882..1214745 (+)	864	WP_000626228.1	menaquinone biosynthesis family protein	-
HPF30_RS05920 (HPF30_1144)	-	1214742..1215509 (-)	768	WP_000506349.1	hypothetical protein	-
HPF30_RS05925 (HPF30_1145)	-	1215597..1216178 (-)	582	WP_000660351.1	hypothetical protein	-
HPF30_RS05930 (HPF30_1146)	-	1216190..1216774 (-)	585	WP_001222003.1	hypothetical protein	-
HPF30_RS05935 (HPF30_1147)	-	1216875..1217081 (-)	207	WP_000670518.1	DUF4006 family protein	-
HPF30_RS05940 (HPF30_1148)	ccoP	1217092..1217970 (-)	879	WP_000346809.1	cytochrome-c oxidase, cbb3-type subunit III	-
HPF30_RS05945 (HPF30_1149)	-	1217972..1218190 (-)	219	WP_001868213.1	cytochrome c oxidase, cbb3-type, CcoQ subunit	-

Sequence

Protein

• Length: 347 a.a.
• Molecular weight: 37669.40 Da
• Isoelectric Point: 5.7176

>NTDB_id=37803 HPF30_RS05910 WP_000963126.1 1212740..1213783(-) (recA) [Helicobacter pylori F30]
MAIDEDKQKAISLAIKQIDKVFGKGALVRLGDKQVEKIDSISTGSLGLDLALGIGGVPKGRIIEIYGPESSGKTTLSLHI
IAECQKNGGVCAFIDAEHALDVHYAKRLGVDTENLLVSQPDTGEQALEILETITRSGGIDLVVVDSVAALTPKAEIDGDM
GDQHVGLQARLMSHALRKITGVLHKMNTTLIFINQIRMKIGMMGYGSPETTTGGNALKFYASVRIDIRRIAALKQNEQHI
GNRAKAKVVKNKVAPPFREAEFDIMFGEGISKEGEIIDYGVKLDIVDKSGAWLSYQDKKLGQGRENAKALLKEDKALANE
ITLKIKESIGSNEEIMPLPDEPLEEME

Nucleotide

• Length: 1044 bp

>NTDB_id=37803 HPF30_RS05910 WP_000963126.1 1212740..1213783(-) (recA) [Helicobacter pylori F30]
ATGGCAATAGATGAAGACAAACAAAAAGCGATTTCTTTAGCGATCAAACAAATTGATAAGGTTTTTGGTAAGGGGGCGTT
GGTGCGCCTTGGGGATAAGCAAGTAGAAAAGATTGACTCTATTTCTACAGGCTCGTTAGGGTTGGATCTGGCTTTAGGGA
TTGGGGGCGTTCCAAAAGGCAGGATCATTGAAATTTATGGGCCAGAGTCAAGCGGGAAGACCACTTTAAGCTTGCATATT
ATTGCAGAATGCCAAAAAAATGGCGGCGTGTGTGCGTTTATTGACGCTGAGCATGCCTTAGATGTGCATTATGCTAAGAG
GTTGGGCGTGGATACGGAAAATCTACTCGTTTCCCAACCTGATACAGGCGAGCAAGCTTTAGAGATTTTAGAAACGATCA
CCAGAAGCGGAGGGATTGATTTAGTGGTGGTGGATTCCGTAGCGGCTCTTACGCCTAAAGCGGAGATTGATGGGGATATG
GGCGATCAGCATGTGGGCTTGCAAGCAAGGCTTATGAGCCATGCGTTAAGAAAAATCACCGGTGTTTTACACAAGATGAA
CACCACTTTAATCTTTATCAATCAAATCAGGATGAAGATTGGCATGATGGGTTATGGGAGTCCAGAGACCACAACCGGAG
GTAATGCCTTAAAATTCTATGCGAGCGTTAGGATTGATATTAGAAGGATTGCGGCTTTAAAACAAAACGAACAGCATATT
GGAAATAGGGCTAAAGCCAAAGTGGTTAAAAATAAAGTCGCTCCGCCCTTTAGAGAAGCGGAATTTGACATCATGTTTGG
GGAGGGGATTTCTAAAGAGGGCGAAATCATTGATTATGGCGTGAAATTAGACATTGTGGATAAGAGTGGGGCATGGCTTA
GCTACCAGGATAAAAAGCTAGGGCAAGGCCGAGAAAACGCTAAAGCCTTACTGAAAGAAGACAAAGCCCTAGCGAATGAA
ATCACTCTTAAGATTAAAGAGAGTATTGGTTCTAATGAAGAGATCATGCCCTTACCAGATGAGCCTTTAGAAGAAATGGA
ATAG

Domains

Predicted by InterProScan.

• recA bacterial DNA recombination protein (RecA_N) (9-271)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Helicobacter pylori strain NCTC11637	99.424	100	0.994
recA	Helicobacter pylori 26695	99.424	100	0.994
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	78.963	94.524	0.746
recA	Staphylococcus aureus strain ATCC 12600	63.636	98.271	0.625
recA	Neisseria gonorrhoeae MS11	66.462	93.66	0.622
recA	Neisseria gonorrhoeae strain FA1090	66.462	93.66	0.622
recA	Acinetobacter nosocomialis M2	62.865	98.559	0.62
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	64.458	95.677	0.617
recA	Bacillus subtilis subsp. subtilis str. 168	65.231	93.66	0.611
recA	Acinetobacter baumannii D1279779	63.914	94.236	0.602
recA	Acinetobacter baylyi ADP1	63.609	94.236	0.599
recA	Ralstonia pseudosolanacearum GMI1000	61.905	96.83	0.599
recA	Pseudomonas stutzeri DSM 10701	60.526	98.559	0.597
recA	Vibrio cholerae strain A1552	61.31	96.83	0.594
recA	Vibrio cholerae O1 biovar El Tor strain E7946	61.31	96.83	0.594
recA	Glaesserella parasuis strain SC1401	60.671	94.524	0.573
recA	Streptococcus pneumoniae R6	55.84	100	0.565
recA	Streptococcus pneumoniae R36A	55.84	100	0.565
recA	Streptococcus pneumoniae Rx1	55.84	100	0.565
recA	Streptococcus pneumoniae D39	55.84	100	0.565
recA	Streptococcus pneumoniae TIGR4	55.84	100	0.565
recA	Latilactobacillus sakei subsp. sakei 23K	54.622	100	0.562
recA	Streptococcus pyogenes NZ131	57.576	95.101	0.548
recA	Lactococcus lactis subsp. cremoris KW2	57.751	94.813	0.548
recA	Streptococcus mitis NCTC 12261	57.447	94.813	0.545
recA	Streptococcus mitis SK321	57.447	94.813	0.545
recA	Streptococcus thermophilus LMD-9	56.667	95.101	0.539
recA	Streptococcus thermophilus LMG 18311	56.667	95.101	0.539
recA	Streptococcus mutans UA159	55.988	96.254	0.539
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	56.442	93.948	0.53