Detailed information NTG0021286

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: PA3617
• Genome accession: NC_002516
• Coordinates: 4051564..4052604 (-)
• Length: 346 a.a.
• NCBI ID: NP_252307.1
• Uniprot ID: P08280
• Organism: Pseudomonas aeruginosa PAO1
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 4046564..4057604

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PA3614	-	4048519..4049922 (+)	1404	NP_252304.1	hypothetical protein	-
PA3615	-	4050005..4051075 (+)	1071	NP_252305.1	hypothetical protein	-
PA3616	-	4051097..4051558 (-)	462	NP_252306.1	recombination regulator RecX	-
PA3617	recA	4051564..4052604 (-)	1041	NP_252307.1	recombinase A	Machinery gene
PA3618	-	4052738..4053244 (-)	507	NP_252308.1	hypothetical protein	-
PA3619	-	4053392..4054399 (+)	1008	NP_252309.1	hypothetical protein	-
PA3620	mutS	4054525..4057092 (+)	2568	NP_252310.1	DNA mismatch repair protein MutS	-
PA3621	fdxA	4057159..4057482 (+)	324	NP_252311.1	ferredoxin I	-

Sequence

Protein

• Length: 346 a.a.
• Molecular weight: 36879.15 Da
• Isoelectric Point: 5.1581

>NTDB_id=21286 PA3617 NP_252307.1 4051564..4052604(-) (recA) [Pseudomonas aeruginosa PAO1]
MDENKKRALAAALGQIERQFGKGAVMRMGDHERQAIPAISTGSLGLDIALGIGGLPKGRIVEIYGPESSGKTTLTLSVIA
EAQKQGATCAFVDAEHALDPDYAGKLGVNVDDLLVSQPDTGEQALEITDMLVRSNAVDVIIVDSVAALVPKAEIEGEMGD
AHVGLQARLMSQALRKITGNIKNANCLVIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRTGAVKEGDEVVGSE
TRVKVVKNKVSPPFRQAEFQILYGKGIYRTGEIIDLGVQLGLVEKSGAWYSYQGSKIGQGKANAAKYLEDNPEIGSVLEK
TIRDQLLAKSGPVKADAEEVADAEAD

Nucleotide

• Length: 1041 bp

>NTDB_id=21286 PA3617 NP_252307.1 4051564..4052604(-) (recA) [Pseudomonas aeruginosa PAO1]
ATGGACGAGAACAAGAAGCGCGCCCTGGCCGCGGCCCTGGGACAGATCGAACGCCAATTCGGCAAAGGCGCGGTCATGCG
CATGGGCGACCATGAGCGCCAGGCGATCCCGGCCATCTCCACCGGCTCCCTGGGTCTGGACATCGCCCTCGGCATCGGCG
GCCTGCCCAAGGGCCGGATCGTCGAGATCTACGGTCCGGAATCCTCGGGCAAGACCACCCTGACCCTCTCGGTGATCGCC
GAGGCCCAGAAACAGGGCGCCACCTGTGCCTTCGTCGACGCCGAGCACGCGCTCGATCCCGACTATGCCGGCAAGCTGGG
CGTCAACGTCGACGACCTGCTGGTCTCCCAGCCGGACACCGGCGAGCAGGCCCTGGAAATCACCGACATGCTGGTGCGCT
CCAACGCGGTCGACGTGATCATCGTCGACTCCGTGGCCGCGCTGGTACCCAAGGCCGAGATCGAAGGCGAGATGGGCGAC
GCCCACGTCGGCCTGCAGGCACGCCTGATGTCCCAGGCGCTGCGCAAGATCACCGGCAATATCAAGAACGCCAACTGCCT
GGTCATCTTCATCAACCAGATCCGCATGAAGATCGGCGTCATGTTCGGCAACCCGGAAACCACCACCGGCGGTAACGCAC
TGAAGTTCTACGCCTCGGTCCGCCTGGACATCCGTCGTACCGGCGCGGTGAAGGAAGGCGACGAGGTGGTGGGTAGCGAA
ACCCGCGTCAAGGTGGTGAAGAACAAGGTTTCCCCGCCGTTCCGCCAGGCCGAGTTCCAGATCCTCTACGGTAAGGGCAT
CTACCGTACCGGCGAGATCATCGATCTGGGCGTGCAATTGGGCCTGGTCGAGAAGTCCGGCGCCTGGTACAGCTACCAGG
GCAGCAAGATCGGCCAGGGCAAGGCGAACGCCGCCAAGTACCTGGAAGACAATCCGGAAATCGGTTCGGTACTGGAGAAG
ACCATTCGCGACCAGTTGCTGGCCAAGAGCGGCCCGGTGAAGGCCGACGCCGAAGAAGTGGCTGACGCCGAAGCCGATTG
A

Domains

Predicted by InterProScan.

• recA bacterial DNA recombination protein (RecA_N) (7-267)

3D structure

• PDB: 8S70
• PDB: 8S7G

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Pseudomonas stutzeri DSM 10701	90.751	100	0.908
recA	Acinetobacter baumannii D1279779	73.256	99.422	0.728
recA	Acinetobacter baylyi ADP1	73.684	98.844	0.728
recA	Acinetobacter nosocomialis M2	73.607	98.555	0.725
recA	Vibrio cholerae strain A1552	75.535	94.509	0.714
recA	Vibrio cholerae O1 biovar El Tor strain E7946	75.535	94.509	0.714
recA	Glaesserella parasuis strain SC1401	71.594	99.711	0.714
recA	Ralstonia pseudosolanacearum GMI1000	73.633	89.884	0.662
recA	Neisseria gonorrhoeae MS11	70.37	93.642	0.659
recA	Neisseria gonorrhoeae strain FA1090	70.37	93.642	0.659
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	64.526	94.509	0.61
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	61.721	97.399	0.601
recA	Staphylococcus aureus strain ATCC 12600	60.35	99.133	0.598
recA	Helicobacter pylori strain NCTC11637	62.385	94.509	0.59
recA	Helicobacter pylori 26695	61.774	94.509	0.584
recA	Bacillus subtilis subsp. subtilis str. 168	62.422	93.064	0.581
recA	Streptococcus mitis NCTC 12261	57.514	100	0.575
recA	Streptococcus pneumoniae Rx1	57.225	100	0.572
recA	Streptococcus pneumoniae R36A	57.225	100	0.572
recA	Streptococcus pneumoniae D39	57.225	100	0.572
recA	Streptococcus pneumoniae TIGR4	57.225	100	0.572
recA	Streptococcus pneumoniae R6	57.225	100	0.572
recA	Streptococcus mitis SK321	57.225	100	0.572
recA	Streptococcus pyogenes NZ131	56.322	100	0.566
recA	Streptococcus mutans UA159	59.939	94.509	0.566
recA	Latilactobacillus sakei subsp. sakei 23K	61.859	90.173	0.558
recA	Streptococcus thermophilus LMG 18311	58.769	93.931	0.552
recA	Streptococcus thermophilus LMD-9	58.769	93.931	0.552
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	55.963	94.509	0.529
recA	Lactococcus lactis subsp. cremoris KW2	56.037	93.353	0.523