Detailed information NTG1120338

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: EL191_RS24645
• Genome accession: NZ_LR134290
• Coordinates: 995356..995541 (+)
• Length: 61 a.a.
• NCBI ID: WP_041976804.1
• Uniprot ID: -
• Organism: Ectopseudomonas mendocina strain NCTC10897
• Function: type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake

Genomic Context

Location: 990356..1000541

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EL191_RS04505 (NCTC10897_00905)	coaE	990409..991017 (-)	609	WP_041976792.1	dephospho-CoA kinase	-
EL191_RS04510 (NCTC10897_00906)	pilD	991287..992153 (-)	867	WP_162184340.1	A24 family peptidase	Machinery gene
EL191_RS04515 (NCTC10897_00907)	pilC	992157..993377 (-)	1221	WP_041976797.1	type II secretion system F family protein	Machinery gene
EL191_RS04520 (NCTC10897_00908)	pilB	993381..995081 (-)	1701	WP_041976801.1	type IV-A pilus assembly ATPase PilB	Machinery gene
EL191_RS24645 (NCTC10897_00909)	pilA	995356..995541 (+)	186	WP_041976804.1	prepilin-type N-terminal cleavage/methylation domain-containing protein	Machinery gene
EL191_RS04530	-	995559..996011 (+)	453	WP_126403455.1	hypothetical protein	-
EL191_RS04535 (NCTC10897_00910)	-	996094..996903 (+)	810	WP_041976806.1	hypothetical protein	-
EL191_RS04540 (NCTC10897_00911)	-	996866..997744 (+)	879	WP_230926001.1	hypothetical protein	-
EL191_RS04545 (NCTC10897_00912)	-	997741..998652 (+)	912	WP_041976812.1	ABC transporter ATP-binding protein	-
EL191_RS04550 (NCTC10897_00913)	nadC	998761..999609 (-)	849	WP_041976814.1	carboxylating nicotinate-nucleotide diphosphorylase	-

Sequence

Protein

• Length: 61 a.a.
• Molecular weight: 6618.89 Da
• Isoelectric Point: 10.5719

>NTDB_id=1120338 EL191_RS24645 WP_041976804.1 995356..995541(+) (pilA) [Ectopseudomonas mendocina strain NCTC10897]
MKSLKKQKGFTLIELMIVIAIIGILAAIAIPQFNDYRQKANDTSAVADVKNGVTSIISSLR

Nucleotide

• Length: 186 bp

>NTDB_id=1120338 EL191_RS24645 WP_041976804.1 995356..995541(+) (pilA) [Ectopseudomonas mendocina strain NCTC10897]
ATGAAGTCTCTTAAGAAGCAAAAGGGTTTTACCCTGATCGAGCTGATGATCGTGATCGCGATCATCGGTATTCTGGCTGC
TATCGCCATTCCTCAGTTTAATGATTATCGTCAAAAAGCGAACGATACTTCGGCGGTTGCTGATGTGAAGAACGGTGTTA
CATCTATTATTTCTTCTCTGCGCTAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (5-30)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Pseudomonas aeruginosa PAK	57.895	93.443	0.541
pilA/pilA1	Eikenella corrodens VA1	75.61	67.213	0.508
pilA	Ralstonia pseudosolanacearum GMI1000	62.5	78.689	0.492
pilA	Vibrio parahaemolyticus RIMD 2210633	63.043	75.41	0.475
pilA/pilAI	Pseudomonas stutzeri DSM 10701	63.043	75.41	0.475
pilA2	Legionella pneumophila strain ERS1305867	68.293	67.213	0.459
pilA2	Legionella pneumophila str. Paris	68.293	67.213	0.459
comP	Acinetobacter baylyi ADP1	75.676	60.656	0.459
pilA	Vibrio campbellii strain DS40M4	77.778	59.016	0.459
pilE	Neisseria elongata subsp. glycolytica ATCC 29315	77.778	59.016	0.459
pilA	Acinetobacter baumannii strain A118	58.333	78.689	0.459
pilA	Acinetobacter nosocomialis M2	59.574	77.049	0.459
pilA/pilAII	Pseudomonas stutzeri DSM 10701	54	81.967	0.443
pilA/pilA4	Thermus thermophilus HB27	54	81.967	0.443
pilV	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	55.102	80.328	0.443
pilE	Neisseria gonorrhoeae strain FA1090	65	65.574	0.426
pilE	Neisseria gonorrhoeae MS11	65	65.574	0.426
pilA	Vibrio cholerae C6706	72.222	59.016	0.426
pilA	Vibrio cholerae strain A1552	72.222	59.016	0.426
pilA	Vibrio cholerae O1 biovar El Tor strain E7946	72.222	59.016	0.426
pilA	Glaesserella parasuis strain SC1401	75.758	54.098	0.41
pilA	Haemophilus influenzae Rd KW20	73.529	55.738	0.41
pilA	Haemophilus influenzae 86-028NP	73.529	55.738	0.41
pilE	Acinetobacter baumannii D1279779	51.111	73.77	0.377
comF	Acinetobacter baylyi ADP1	60.526	62.295	0.377