Detailed information NTG1006030

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: ABKP32_RS09650
• Genome accession: NZ_CP157342
• Coordinates: 2058397..2059098 (-)
• Length: 233 a.a.
• NCBI ID: WP_000594589.1
• Uniprot ID: A0A9P3CZ31
• Organism: Acinetobacter baumannii strain 2024CK-00538
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2053397..2064098

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABKP32_RS09620 (ABKP32_09620)	-	2053703..2054146 (-)	444	WP_001246675.1	SRPBCC family protein	-
ABKP32_RS09625 (ABKP32_09625)	tadA	2054216..2054719 (-)	504	WP_000033178.1	tRNA adenosine(34) deaminase TadA	-
ABKP32_RS09630 (ABKP32_09630)	-	2054726..2055850 (-)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
ABKP32_RS09635 (ABKP32_09635)	ung	2055847..2056560 (-)	714	WP_001177528.1	uracil-DNA glycosylase	-
ABKP32_RS09640 (ABKP32_09640)	-	2056611..2057207 (-)	597	WP_000908452.1	6-carboxytetrahydropterin synthase	-
ABKP32_RS09645 (ABKP32_09645)	gspK	2057438..2058397 (-)	960	WP_000301476.1	type II secretion system minor pseudopilin GspK	-
ABKP32_RS09650 (ABKP32_09650)	xcpW	2058397..2059098 (-)	702	WP_000594589.1	type II secretion system minor pseudopilin GspJ	Machinery gene
ABKP32_RS09655 (ABKP32_09655)	xcpV	2059098..2059478 (-)	381	WP_000836911.1	type II secretion system minor pseudopilin GspI	Machinery gene
ABKP32_RS09660 (ABKP32_09660)	-	2059468..2060022 (-)	555	WP_000841373.1	type II secretion system protein	-
ABKP32_RS09665 (ABKP32_09665)	-	2060032..2060640 (-)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
ABKP32_RS09670 (ABKP32_09670)	-	2060678..2061451 (-)	774	WP_000497298.1	TatD family hydrolase	-
ABKP32_RS09675 (ABKP32_09675)	-	2061469..2061810 (-)	342	WP_001183024.1	PilZ domain-containing protein	-
ABKP32_RS09680 (ABKP32_09680)	-	2061822..2062802 (-)	981	WP_001075411.1	DNA polymerase III subunit delta'	-
ABKP32_RS09685 (ABKP32_09685)	kdsB	2062814..2063575 (-)	762	WP_000680697.1	3-deoxy-manno-octulosonate cytidylyltransferase	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26639.58 Da
• Isoelectric Point: 9.3468

>NTDB_id=1006030 ABKP32_RS09650 WP_000594589.1 2058397..2059098(-) (xcpW) [Acinetobacter baumannii strain 2024CK-00538]
MIKNKYIHIRSIDSRLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=1006030 ABKP32_RS09650 WP_000594589.1 2058397..2059098(-) (xcpW) [Acinetobacter baumannii strain 2024CK-00538]
ATGATAAAAAATAAATATATTCACATCCGAAGCATTGATTCTCGCCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCAAACCAAGGTGGTCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTTTACGTTTTAGCAAAGCAGGCGTAACGGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGACCAAAAAAAATTATATCGTCTTAAATATACAAATTTGAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAGTGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCGCAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	99.571	100	0.996