NT genes of 'Neisseria perflava strain LPB0400'


In this species, transformation by exogenous DNA is regulated by the presence of a specific DNA Uptake Sequence (DUS) (PMID: 23637627).
Evidence:

Gene name Gene type Function Related MGE Organism Genome accession Locus tag Protein ID
insolico comP Machinery gene DNA binding and uptake IS/Tn Neisseria perflava strain LPB0400 NZ_CP079818 LPB400_RS00410 WP_107769082.1
insolico comE Machinery gene DNA binding and uptake IS/Tn Neisseria perflava strain LPB0400 NZ_CP079818 LPB400_RS00415 WP_036472233.1
insolico dsbA2 Machinery gene DNA binding and uptake - Neisseria perflava strain LPB0400 NZ_CP079818 LPB400_RS00455 WP_219089054.1
insolico dprA Machinery gene DNA processing - Neisseria perflava strain LPB0400 NZ_CP079818 LPB400_RS01440 WP_219089156.1
insolico comE Machinery gene DNA binding and uptake - Neisseria perflava strain LPB0400 NZ_CP079818 LPB400_RS01525 WP_036472233.1
insolico pilT Machinery gene DNA binding and uptake - Neisseria perflava strain LPB0400 NZ_CP079818 LPB400_RS01580 WP_004519239.1
insolico pilA Machinery gene DNA binding and uptake - Neisseria perflava strain LPB0400 NZ_CP079818 LPB400_RS01875 WP_219089201.1
insolico pilD Machinery gene DNA binding and uptake - Neisseria perflava strain LPB0400 NZ_CP079818 LPB400_RS03180 WP_225905497.1
insolico pilG Machinery gene DNA binding and uptake - Neisseria perflava strain LPB0400 NZ_CP079818 LPB400_RS03185 WP_219089370.1
insolico pilF Machinery gene DNA binding and uptake - Neisseria perflava strain LPB0400 NZ_CP079818 LPB400_RS03190 WP_070824176.1
insolico comE Machinery gene DNA binding and uptake - Neisseria perflava strain LPB0400 NZ_CP079818 LPB400_RS03775 WP_036472233.1
insolico comP Machinery gene DNA binding and uptake - Neisseria perflava strain LPB0400 NZ_CP079818 LPB400_RS03780 WP_219089457.1
insolico dsbA1 Machinery gene DNA binding and uptake - Neisseria perflava strain LPB0400 NZ_CP079818 LPB400_RS03790 WP_107768929.1
insolico comM Machinery gene DNA processing - Neisseria perflava strain LPB0400 NZ_CP079818 LPB400_RS03800 WP_107768914.1
insolico recC Machinery gene Homologous recombination - Neisseria perflava strain LPB0400 NZ_CP079818 LPB400_RS03825 WP_219089461.1
insolico recX Regulator Competence regulation - Neisseria perflava strain LPB0400 NZ_CP079818 LPB400_RS04555 WP_219089564.1
insolico recG Machinery gene Homologous recombination - Neisseria perflava strain LPB0400 NZ_CP079818 LPB400_RS04605 WP_219089699.1
insolico ssb Machinery gene DNA processing IScluster/Tn Neisseria perflava strain LPB0400 NZ_CP079818 LPB400_RS05650 WP_107792518.1
insolico comL Machinery gene DNA binding and uptake - Neisseria perflava strain LPB0400 NZ_CP079818 LPB400_RS06340 WP_004519923.1
insolico recA Machinery gene Homologous recombination - Neisseria perflava strain LPB0400 NZ_CP079818 LPB400_RS06375 WP_003680794.1
insolico recD Machinery gene Homologous recombination ICE Neisseria perflava strain LPB0400 NZ_CP079818 LPB400_RS07630 WP_107792034.1
insolico pilH Machinery gene DNA binding and uptake - Neisseria perflava strain LPB0400 NZ_CP079818 LPB400_RS07925 WP_219088641.1
insolico pilJ Machinery gene DNA binding and uptake - Neisseria perflava strain LPB0400 NZ_CP079818 LPB400_RS07935 WP_070460863.1
insolico pilK Machinery gene DNA binding and uptake - Neisseria perflava strain LPB0400 NZ_CP079818 LPB400_RS07940 WP_070460864.1
insolico pilL Machinery gene DNA binding and uptake - Neisseria perflava strain LPB0400 NZ_CP079818 LPB400_RS07945 WP_070460866.1
insolico recB Machinery gene Homologous recombination - Neisseria perflava strain LPB0400 NZ_CP079818 LPB400_RS08395 WP_219088710.1
insolico tpc Machinery gene DNA processing DNA binding and uptake - Neisseria perflava strain LPB0400 NZ_CP079818 LPB400_RS08490 WP_219088728.1
insolico pilU Machinery gene DNA binding and uptake Genomic island Neisseria perflava strain LPB0400 NZ_CP079818 LPB400_RS08555 WP_049328597.1
insolico radA Machinery gene Homologous recombination - Neisseria perflava strain LPB0400 NZ_CP079818 LPB400_RS08790 WP_070843275.1
insolico comA Machinery gene DNA processing DNA binding and uptake - Neisseria perflava strain LPB0400 NZ_CP079818 LPB400_RS08920 WP_219088778.1
insolico comE Machinery gene DNA binding and uptake - Neisseria perflava strain LPB0400 NZ_CP079818 LPB400_RS09465 WP_036472233.1
insolico pilA2 Machinery gene DNA binding and uptake - Neisseria perflava strain LPB0400 NZ_CP079818 LPB400_RS10120 WP_219088883.1
insolico pilQ Machinery gene DNA processing - Neisseria perflava strain LPB0400 NZ_CP079818 LPB400_RS10605 WP_219088963.1
insolico pilP Machinery gene DNA binding and uptake - Neisseria perflava strain LPB0400 NZ_CP079818 LPB400_RS10610 WP_070460442.1
insolico pilN Machinery gene DNA binding and uptake - Neisseria perflava strain LPB0400 NZ_CP079818 LPB400_RS10620 WP_070460446.1

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    experimental Experimentally validated     insolico Bioinformatically predicted