MGE detailed information
MGE type: Prophage MGE length: 51729 bp
Accession: NZ_CP020543 Location: 2249542..2301270 Organism: Escherichia coli C Replicon: chromosome
Accession: NZ_CP020543 Location: 2249542..2301270 Organism: Escherichia coli C Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| B6N50_RS11430 (B6N50_11430) | 2245441..2246661 | + | 1221 | WP_000225262.1 | DNA-binding transcriptional repressor Mlc | - |
| B6N50_RS11435 (B6N50_11435) | 2246786..2247481 | + | 696 | WP_000919231.1 | dethiobiotin synthase | - |
| B6N50_RS11440 (B6N50_11440) | 2247434..2248726 | - | 1293 | WP_001315626.1 | voltage-gated ClC-type chloride channel ClcB | - |
| B6N50_RS11445 (B6N50_11445) | 2248885..2249499 | - | 615 | WP_000148710.1 | Tat proofreading chaperone DmsD | - |
| B6N50_RS11450 (B6N50_11450) | 2249542..2250396 | - | 855 | WP_000526503.1 | dimethyl sulfoxide reductase anchor subunit | - |
| B6N50_RS11455 (B6N50_11455) | 2250398..2251015 | - | 618 | WP_000213028.1 | dimethylsulfoxide reductase subunit B | - |
| B6N50_RS11460 (B6N50_11460) | 2251026..2253449 | - | 2424 | WP_001340362.1 | dimethyl sulfoxide reductase subunit A | - |
| B6N50_RS11465 (B6N50_11465) | 2253510..2255936 | - | 2427 | WP_000041675.1 | dimethyl sulfoxide reductase subunit A | - |
| B6N50_RS11470 (B6N50_11470) | 2256135..2256440 | - | 306 | WP_001300836.1 | DUF1161 domain-containing protein | - |
| B6N50_RS11475 (B6N50_11475) | 2256548..2257258 | + | 711 | WP_001321287.1 | YnfC family lipoprotein | - |
| B6N50_RS11480 (B6N50_11480) | 2257261..2257821 | - | 561 | WP_001138581.1 | spermidine N1-acetyltransferase | - |
| B6N50_RS11485 (B6N50_11485) | 2257856..2258197 | - | 342 | WP_000705211.1 | DUF1283 family protein | - |
| B6N50_RS11490 (B6N50_11490) | 2258332..2258658 | + | 327 | WP_000598292.1 | YnfA family protein | - |
| B6N50_RS11500 (B6N50_11500) | 2258864..2260078 | + | 1215 | WP_001295394.1 | starvation-sensing protein RspA | - |
| B6N50_RS11505 (B6N50_11505) | 2260090..2261109 | + | 1020 | WP_000836066.1 | Zn-dependent oxidoreductase | - |
| B6N50_RS11510 (B6N50_11510) | 2261167..2261295 | + | 129 | WP_001389342.1 | hypothetical protein | - |
| B6N50_RS11515 (B6N50_11515) | 2261297..2262577 | - | 1281 | WP_000876986.1 | Putative defective protein IntQ ; Integrase | Integrase |
| B6N50_RS11520 (B6N50_11520) | 2262612..2262863 | - | 252 | WP_000005552.1 | excisionase family protein | - |
| B6N50_RS11525 (B6N50_11525) | 2262936..2265407 | - | 2472 | WP_081508834.1 | exonuclease | - |
| B6N50_RS11530 (B6N50_11530) | 2265500..2265691 | - | 192 | WP_001083297.1 | lysis protein YdfD | - |
| B6N50_RS11535 (B6N50_11535) | 2265688..2265876 | - | 189 | WP_000854559.1 | cell division inhibition protein DicB | - |
| B6N50_RS11545 (B6N50_11545) | 2266444..2266662 | - | 219 | WP_001171942.1 | hypothetical protein | - |
| B6N50_RS11555 (B6N50_11555) | 2266822..2266977 | - | 156 | WP_000379575.1 | DUF1391 family protein | - |
| B6N50_RS11560 (B6N50_11560) | 2267144..2267551 | - | 408 | WP_000448564.1 | DNA-binding transcriptional dual regulator DicA | - |
| B6N50_RS11565 (B6N50_11565) | 2267635..2267865 | + | 231 | WP_000920568.1 | dicB transcriptional regulator DicC | - |
| B6N50_RS11570 (B6N50_11570) | 2267849..2268271 | + | 423 | Protein_2114 | hypothetical protein | - |
| B6N50_RS23910 | 2268489..2268776 | + | 288 | Protein_2115 | hypothetical protein | - |
| B6N50_RS11600 (B6N50_11600) | 2270770..2272083 | + | 1314 | WP_000589005.1 | ISNCY family transposase ISCARN112 | Transposase |
| B6N50_RS11605 (B6N50_11605) | 2272520..2272852 | - | 333 | WP_001301033.1 | protein FlxA | - |
| B6N50_RS11610 (B6N50_11610) | 2273055..2273360 | - | 306 | WP_001326990.1 | hypothetical protein | - |
| B6N50_RS11615 (B6N50_11615) | 2273385..2273624 | + | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| B6N50_RS11620 (B6N50_11620) | 2273624..2273911 | + | 288 | WP_047402633.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| B6N50_RS11625 (B6N50_11625) | 2273983..2274138 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| B6N50_RS11630 (B6N50_11630) | 2274355..2274606 | + | 252 | WP_000980994.1 | hypothetical protein | - |
| B6N50_RS11635 (B6N50_11635) | 2274673..2274951 | + | 279 | WP_012304870.1 | hypothetical protein | - |
| B6N50_RS11640 (B6N50_11640) | 2274953..2276002 | + | 1050 | WP_001265199.1 | DUF968 domain-containing protein | - |
| B6N50_RS11645 (B6N50_11645) | 2276016..2276768 | + | 753 | WP_001047135.1 | antitermination protein | - |
| B6N50_RS23655 | 2277046..2277135 | - | 90 | WP_120795389.1 | hypothetical protein | - |
| B6N50_RS11650 (B6N50_11650) | 2277190..2277402 | - | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| B6N50_RS11655 (B6N50_11655) | 2277703..2277918 | + | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| B6N50_RS24020 | 2278282..2278452 | - | 171 | WP_211180497.1 | putative zinc-binding protein YnfU | - |
| B6N50_RS11660 (B6N50_11660) | 2278672..2278887 | + | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| B6N50_RS11665 (B6N50_11665) | 2278892..2279203 | + | 312 | WP_000189916.1 | YdfR family protein | - |
| B6N50_RS11670 (B6N50_11670) | 2279200..2279733 | + | 534 | WP_047402632.1 | lysozyme | - |
| B6N50_RS11675 (B6N50_11675) | 2279730..2280227 | + | 498 | WP_001071769.1 | DUF2514 domain-containing protein | - |
| B6N50_RS11680 (B6N50_11680) | 2280590..2280802 | + | 213 | WP_000066495.1 | cold shock protein CspI | - |
| B6N50_RS11685 (B6N50_11685) | 2280813..2281001 | + | 189 | WP_071524604.1 | cold-shock protein | - |
| B6N50_RS23660 | 2281004..2281069 | + | 66 | WP_120795388.1 | hypothetical protein | - |
| B6N50_RS11690 (B6N50_11690) | 2281149..2281304 | + | 156 | WP_001309517.1 | hypothetical protein | - |
| B6N50_RS11695 (B6N50_11695) | 2281476..2281649 | + | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| B6N50_RS11700 (B6N50_11700) | 2281801..2282211 | - | 411 | WP_000373090.1 | DUF1398 domain-containing protein | - |
| B6N50_RS11705 (B6N50_11705) | 2282269..2282442 | - | 174 | WP_001301001.1 | YlcI/YnfO family protein | - |
| B6N50_RS11710 (B6N50_11710) | 2282441..2283403 | + | 963 | WP_081508886.1 | phage tail protein | - |
| B6N50_RS11715 (B6N50_11715) | 2283403..2283978 | + | 576 | WP_000885611.1 | tail fiber assembly protein | - |
| B6N50_RS11720 (B6N50_11720) | 2284076..2284666 | - | 591 | WP_000078177.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| B6N50_RS11725 (B6N50_11725) | 2284983..2285216 | - | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| B6N50_RS23665 | 2285285..2285398 | - | 114 | WP_120795384.1 | hypothetical protein | - |
| B6N50_RS11730 (B6N50_11730) | 2285919..2287286 | + | 1368 | Protein_2147 | MHS family MFS transporter | - |
| B6N50_RS11735 (B6N50_11735) | 2287375..2288835 | + | 1461 | WP_000527809.1 | mannitol dehydrogenase family protein | - |
| B6N50_RS11740 (B6N50_11740) | 2288870..2289073 | - | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| B6N50_RS11745 (B6N50_11745) | 2289250..2289936 | - | 687 | WP_000215549.1 | DNA-binding transcriptional regulator YdfH | - |
| B6N50_RS11750 (B6N50_11750) | 2290025..2290771 | - | 747 | WP_000636571.1 | NADP-dependent 3-hydroxy acid dehydrogenase YdfG | VF |
| B6N50_RS11760 (B6N50_11760) | 2290908..2292953 | + | 2046 | WP_000210373.1 | peptidyl-dipeptidase Dcp | - |
| B6N50_RS11765 (B6N50_11765) | 2292997..2293515 | - | 519 | WP_001024746.1 | 2-oxo-tetronate isomerase | - |
| B6N50_RS11775 (B6N50_11775) | 2293826..2294946 | + | 1121 | WP_085950818.1 | IS3 family transposase ISSen4 | Transposase |
| B6N50_RS11780 (B6N50_11780) | 2295016..2295408 | + | 393 | WP_000671737.1 | YdeI family stress tolerance OB fold protein | - |
| B6N50_RS11785 (B6N50_11785) | 2295663..2296553 | + | 891 | WP_000592814.1 | diguanylate cyclase DgcZ | - |
| B6N50_RS24025 | 2296668..2296772 | - | 105 | WP_211180496.1 | protein MgtT | - |
| B6N50_RS11790 (B6N50_11790) | 2296772..2296867 | - | 96 | WP_000901367.1 | protein MgtS | - |
| B6N50_RS11795 (B6N50_11795) | 2296994..2298181 | - | 1188 | Protein_2159 | hypothetical protein | VF |
| B6N50_RS11800 (B6N50_11800) | 2298376..2299275 | + | 900 | WP_000087214.1 | O-acetylserine/cysteine exporter | - |
| B6N50_RS11805 (B6N50_11805) | 2299306..2299524 | - | 219 | WP_000803657.1 | multiple antibiotic resistance protein MarB | - |
| B6N50_RS11810 (B6N50_11810) | 2299556..2299939 | - | 384 | WP_000091199.1 | Multiple antibiotic resistance protein MarA | VF |
| B6N50_RS11815 (B6N50_11815) | 2299959..2300393 | - | 435 | WP_000843414.1 | multiple antibiotic resistance transcriptional regulator MarR | - |
| B6N50_RS11820 (B6N50_11820) | 2300605..2301270 | + | 666 | WP_000885033.1 | NAAT family transporter MarC | - |
| B6N50_RS11825 (B6N50_11825) | 2301295..2302485 | - | 1191 | WP_000210799.1 | L-arabinose MFS transporter | - |
| B6N50_RS11830 (B6N50_11830) | 2302635..2303750 | - | 1116 | WP_000258600.1 | putative protein YneK | - |
| B6N50_RS11835 (B6N50_11835) | 2303828..2304709 | - | 882 | WP_000366501.1 | LysR family transcriptional regulator | - |
| B6N50_RS11840 (B6N50_11840) | 2304810..2306198 | + | 1389 | WP_047402628.1 | succinate-semialdehyde dehydrogenase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli str. K-12 substr. MG1655 strain K-12 | Prophage | TA49444 | NZ_CP009685 | 2025689..2080477 | 0.009 | |
| Escherichia coli K-12 strain K-12 MG1655 | Prophage | TA52631 | NZ_CP010443 | 2357601..2412389 | 0.009 | |
| Escherichia coli strain USML2 | Prophage | TA53503 | NZ_CP011124 | 3209613..3249971 | 0.009 | |
| Escherichia coli str. K-12 substr. MG1655 strain JW5437-1 | Prophage | TA60779 | NZ_CP014348 | 3669648..3710006 | 0.009 | |
| Escherichia coli strain 4A | Prophage | TA94334 | NZ_CP026353 | 1614804..1669592 | 0.009 | |
| Escherichia coli strain C600 | Prophage | TA108583 | NZ_CP031214 | 2258054..2298412 | 0.009 | |
| Escherichia coli str. K-12 substr. MG1655 strain K-12 | Prophage | TA112075 | NZ_CP032667 | 2218134..2258492 | 0.009 | |
| Escherichia coli strain JME66 | Prophage | TA136134 | NZ_CP042844 | 2319412..2374200 | 0.009 | |
| Escherichia coli strain CFSAN061772 | Prophage | TA136470 | NZ_CP042893 | 2220981..2278880 | 0.008 | |
| Escherichia coli O16:H48 strain PG20180062 | Prophage | TA137602 | NZ_CP043195 | 2508272..2548630 | 0.009 | |
| Escherichia coli O16:H48 strain PG20180061 | Prophage | TA137642 | NZ_CP043197 | 4199959..4240317 | 0.009 | |
| Escherichia coli strain ecMN1F | Prophage | TA140893 | NZ_CP044410 | 2320359..2375147 | 0.009 | |
| Escherichia coli strain NBRC 3301 | Prophage | TA149472 | NZ_CP048439 | 2181110..2235898 | 0.009 | |
| Escherichia coli strain WF5-5-T1 | Prophage | TA150535 | NZ_CP049110 | 2213477..2269042 | 0.009 | |
| Escherichia coli strain MFDpir | Prophage | TA170780 | NZ_CP060708 | 1599254..1654042 | 0.009 | |
| Escherichia coli strain ABW_A33 | Prophage | TA186007 | NZ_CP067299 | 2143045..2203758 | 0.007 | |
| Escherichia coli strain CY598 | Prophage | TA187096 | NZ_CP068283 | 1649619..1705744 | 0.009 | |
| Escherichia coli O141:H4 strain P13-6 | Prophage | TA211257 | NZ_CP080223 | 2354039..2411274 | 0.01 | |
| Escherichia coli strain g83 | Prophage | TA219870 | NZ_CP084894 | 1618149..1672937 | 0.009 | |
| Escherichia coli strain g62 | Prophage | TA219956 | NZ_CP084896 | 1618149..1672937 | 0.009 | |
| Escherichia coli strain PJ-T13 | Prophage | TA224740 | NZ_CP087110 | 2074255..2130381 | 0.009 | |
| Escherichia coli str. K-12 substr. MG1655 strain K-12 | Prophage | TA246421 | NZ_CP097881 | 2218488..2258846 | 0.009 | |
| Escherichia coli str. K-12 substr. MG1655 strain K-12 | Prophage | TA246500 | NZ_CP097884 | 2828985..2869343 | 0.009 | |
| Escherichia coli strain SY22A6 | Prophage | TA260129 | NZ_CP106994 | 2226870..2268564 | 0.009 | |
| Escherichia coli strain SY22B3 | Prophage | TA260152 | NZ_CP106995 | 2226870..2268564 | 0.009 | |
| Escherichia coli strain SY22D8 | Prophage | TA260175 | NZ_CP106996 | 2226870..2268564 | 0.009 | |
| Escherichia coli strain SY22B6 | Prophage | TA260198 | NZ_CP106997 | 2226870..2268564 | 0.009 | |
| Escherichia coli strain SY221 | Prophage | TA260221 | NZ_CP106998 | 2226870..2268564 | 0.009 | |
| Escherichia coli strain SY22A4 | Prophage | TA260244 | NZ_CP106999 | 2226870..2268564 | 0.009 | |
| Escherichia coli strain SY22B2 | Prophage | TA260267 | NZ_CP107000 | 2226870..2268564 | 0.009 | |
| Escherichia coli strain SY22B5 | Prophage | TA260290 | NZ_CP107001 | 2226870..2268564 | 0.009 | |
| Escherichia coli strain SY22C3 | Prophage | TA260313 | NZ_CP107002 | 2226870..2268564 | 0.009 | |
| Escherichia coli strain SY22B1 | Prophage | TA260336 | NZ_CP107003 | 2226870..2268564 | 0.009 | |
| Escherichia coli strain SY22A3 | Prophage | TA260359 | NZ_CP107004 | 2226870..2268564 | 0.009 | |
| Escherichia coli strain SY22A1 | Prophage | TA260382 | NZ_CP107005 | 2226870..2268564 | 0.009 | |
| Escherichia coli strain J53-p133 | Prophage | TA264727 | NZ_CP110999 | 2077964..2118322 | 0.009 | |
| Escherichia coli strain J53-p131 | Prophage | TA264756 | NZ_CP111004 | 2077964..2118322 | 0.009 | |
| Escherichia coli strain NCTC122 | Prophage | TA293753 | NZ_LT906474 | 2248614..2294480 | 0.003 |