Salmonella
Experimental investigation has been performed.
Bioinformatics investigation has been performed Experimental investigation has been performed. Bioinformatics investigation has been performed| Regulator ID | Locus tag (Gene) | Related T6SS | Regulator type | Regulatory pathway | Organism | Replicon (Accession) | Coordinates (Strand) | NCBI ID | Target (Regulation) |
|---|---|---|---|---|---|---|---|---|---|
| REG0087 |
STM1751 (H-NS) | T6SS00023 |
protein | Global regulator | Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 | chromosome (NC_003197) | 1847277..1847690 (+) | 16765095 | STM0272 (ClpV) promotor (↑); STM0279 (hcp) promotor (↑); STM0285 promotor (↑); STM0289 (VgrG) promotor (↑); STM0268 promotor (↑) |
| REG0088 |
STM0693 (Fur) | T6SS00023 |
protein | Global regulator | Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 | chromosome (NC_003197) | 756397..756849 (-) | 16764063 | STM0272 (ClpV) promoter (↑) |
| REG0336 |
BWP10_01550 (ssrB) | T6SS01291 |
protein | TCS-RR | Salmonella enterica subsp. enterica serovar Typhimurium strain ATCC 14028 | chromosome (MTFW01000001) | 296600..299362 (+) | 1145677935 | sciS/TssM transcription (↑) |
Experimental investigation has been performed. Bioinformatics investigation has been performed| Effector ID | Locus tag (Gene) | Classification | Cognate immunity protein | Related T6SS | Organism | Replicon (Accession) | Coordinates (Strand) | NCBI ID |
|---|---|---|---|---|---|---|---|---|
| EFF01370 |
SL1344_RS01405 | Tae | IMU00303 |
T6SS00535 |
Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344 | chromosome (NC_016810) | 317659..318144 (+) | 378698249 |
| EFF01380 |
STM0277 (Tae4) | Tae | T6SS00553 |
Salmonella enterica subsp. enterica serovar Typhimurium str. T000240 | chromosome (NC_016860) | 317684..318169 (+) | 378698249 | |
| EFF01467 |
SARI_02603 | Tde | - | T6SS00237 |
Salmonella enterica subsp. arizonae serovar 62:z4z23:- | chromosome (NC_010067) | 2520159..2523749 (-) | 160865837 |
| EFF01810 |
STM14_0336 (Tlde1) | Tde | - | T6SS00551 |
Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S | chromosome (NC_016856) | 329640..330161 (+) | 446891128 |
Experimental investigation has been performed. Bioinformatics investigation has been performed| Immunity protein ID | Locus tag (Gene) | Related T6SS | Organism | Replicon (Accession) | Coordinates (Strand) | Protein GI | Cognate effector |
|---|---|---|---|---|---|---|---|
| IMU00303 |
STM0278 (Tai4) | T6SS00535 |
Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344 | chromosome (NC_016810) | 318129..318512 (+) | 378698250 | EFF01370 |
| IMU00372 |
STM14_0335 (Tldi1) | T6SS00551 |
Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S | chromosome (NC_016856) | 329200..329616 (+) | 267991976 | - |
Experimental investigation has been performed. Bioinformatics investigation has been performed| ID | Locus tag (Gene) | Organism | Replicon (Accession) | Coordinates (Strand) | Protein GI | Response to T6SS attack | Known or putative function |
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Experimental investigation has been performed. Bioinformatics investigation has been performed| Accessory protein ID | Locus tag (Gene) | Related T6SS | Type | Organism | Replicon (Accession) | Coordinates (Strand) | Protein GI | Related structure protein | Related effector |
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