Regulators of regulatory pathway: Transcription regulator

All displayed regulators are experimentally validated.


Note: in the 'Target' column, ↓ means the target is positively regulated by the regulator, while ↑ indicates negative regulation.
experimental Experimental investigation has been performed.
insolico Bioinformatics investigation has been performed
Regulator ID Locus tag (Gene) Related T6SS Regulator type Regulatory pathway Organism                 Replicon (Accession) Coordinates (Strand) NCBI ID Target (Regulation)
REG0001 experimental vfu_A02134 (ihfA) T6SS00529 insolico; T6SS00530 insolico protein Transcription regulator Vibrio furnissii NCTC 11218 chromosome (NC_016602) 2226951..2227244 (-) 490864172 tssD2_a promoter (↓); VflT6SS2 major cluster promoter (↓)
REG0002 experimental vfu_A02422 (ihfB) T6SS00529 insolico; T6SS00530 insolico protein Transcription regulator Vibrio furnissii NCTC 11218 chromosome (NC_016602) 2516092..2516376 (-) 490864456 tssD2_a promoter (↓); VflT6SS2 major cluster promoter (↓)
REG0063 experimental PA4778 (CueR) T6SS00004 experimental protein Transcription regulator Pseudomonas aeruginosa PAO1 chromosome (NC_002516) 5366257..5366655 (+) 15599972 tssA2 (-173 to -140 relative to the ATG start codon) (↓); hcp2 (-208 to -159 relative to the ATG start codon) (↓)
REG0114 experimental VP0820 (ToxR) T6SS00043 experimental protein Transcription regulator Vibrio parahaemolyticus RIMD 2210633 chromosome (NC_004603) 847892..848770 (-) 28897594 VP1400 promotor (↑); VP1409 promotor (↑)
REG0115 experimental VP0350 (CalR/LeuO) T6SS00044 experimental protein Transcription regulator Vibrio parahaemolyticus RIMD 2210633 chromosome (NC_004603) 344763..345722 (+) 28897124 VPA1027 (hcp2) promotor (↓); VPA1043 (Fha) promotor (↓); VP1133 (H-NS) (↓)
REG0126 experimental BMAA1517 T6SS00070 experimental protein Transcription regulator Burkholderia mallei ATCC 23344 chromosome (NC_006349) 1646532..1647593 (-) 499517952 Hcp1 (BMAA0742) expression (↓)
REG0245 experimental ETAE_3098 (PepA) T6SS00372 experimental protein Transcription regulator Edwardsiella tarda EIB202 chromosome (NC_013508) 3260322..3261833 (+) 502612947 ETAE_0886 (esrB) promoter (↑)
REG0247 experimental ETAE_1505 (H-NS) T6SS00372 experimental protein Transcription regulator Edwardsiella tarda EIB202 chromosome (NC_013508) 1615099..1615506 (-) 505274277 ETAE_2430 (evpB) (↑); evpC promotor (↑)
REG0248 experimental EC042_RS26480 (aggR) T6SS00464 experimental protein Transcription regulator Escherichia coli 042 plasmid (NC_017627) 41080..41877 (-) 446692110 EC042_RS26480 (aggR) promoter (↓); EC042_RS26480 (aggR) promoter (↓)
REG0249 experimental EC042_RS18855 (FIS) T6SS00464 experimental protein Transcription regulator Escherichia coli 042 chromosome (NC_017626) 3772795..3773091 (+) 446385050 EC042_RS26480 (aggR) promoter (↓)
REG0254 experimental HMPREF1171_RS04760 T6SS00788 experimental protein Transcription regulator Aeromonas dhakensis strain SSU chromosome (NZ_JH815591) 1041366..1042904 (+) WP_005299999.1 hcp expression (↓)
REG0268 experimental rpoN T6SS00793 experimental protein Transcription regulator Vibrio alginolyticus strain EPJS chromosome (FJ790776) - - T6SS1 transcript (↓)
REG0269 experimental VasH T6SS00793 experimental protein Transcription regulator Vibrio alginolyticus strain EPJS chromosome (FJ790776) - - T6SS1 transcript (↓)
REG0270 experimental CXG97_03740 (Fur) T6SS00904 experimental protein Transcription regulator Escherichia coli strain ExPEC XM chromosome (NZ_CP025328) 729474..729920 (-) 446053847 T6SS1 (TssB) promotor (↑)
REG0276 experimental V12G01_19736 (TfoX) T6SS00939 experimental protein Transcription regulator Vibrio alginolyticus 12G01 chromosome (AAPS01000019) 47689..48276 (-) 91189146 T6SS2 transcripts (↓)
REG0277 experimental V12G01_20658 (TfoY) T6SS00939 experimental protein Transcription regulator Vibrio alginolyticus 12G01 chromosome (AAPS01000039) 21665..22255 (+) 91188194 T6SS transcripts (↓)
REG0278 experimental V12G01_20201 (H-NS) T6SS00939 experimental protein Transcription regulator Vibrio alginolyticus 12G01 chromosome (AAPS01000015) 63783..64190 (+) 91189474 VaT6SS1 transcripts (↑)
REG0294 experimental VCA1552_RS04890 (ihfA) T6SS01112 experimental protein Transcription regulator Vibrio cholerae strain A1552 chromosome (NZ_CP024867) 1028170..1028466 (+) 447152004 Hcp secretion (↓)
REG0295 experimental VCA1552_RS08565 (ihfB) T6SS01112 experimental protein Transcription regulator Vibrio cholerae strain A1552 chromosome (NZ_CP024867) 1839353..1839631 (-) 446089486 Hcp secretion (↓)
REG0320 experimental VC_A0122 T6SS00002 experimental protein Transcription regulator Vibrio cholerae O1 biovar El Tor str. N16961 chromosome (NC_002506) 137379..137621 (+) 9657509 hcp-2 expression (↓)
REG0329 experimental VPBB_RS05425 (H-NS) T6SS00719 experimental protein Transcription regulator Vibrio parahaemolyticus BB22OP chromosome (NC_019955) 1170475..1170882 (-) 505109423 VgrG1 expression and secretion (↑)
REG0364 experimental Y113_RS11250 (RpoS) T6SS00791 experimental protein Transcription regulator Edwardsiella tarda PPD130/91 chromosome (NZ_JACQ01000026) 9122..10108 (-) 502612732 EvpQ transcription and protein level (↑)
REG0372 experimental BMUL_RS00795 (hns) - protein Transcription regulator Burkholderia multivorans ATCC 17616 chromosome (NC_010084) 179094..179390 (+) WP_006401402.1 T6SS (↑)

Note: in the 'Target' column, ↓ means the target is positively regulated by the regulator, while ↑ indicates negative regulation.
experimental Experimental investigation has been performed.
insolico Bioinformatics investigation has been performed
Regulator ID Locus tag (Gene) Related T6SS Regulator type Regulatory pathway Organism                 Replicon (Accession) Coordinates (Strand) NCBI ID Target (Regulation)
REG0001 experimental vfu_A02134 (ihfA) T6SS00529 insolico; T6SS00530 insolico protein Transcription regulator Vibrio furnissii NCTC 11218 chromosome (NC_016602) 2226951..2227244 (-) 490864172 tssD2_a promoter (↓); VflT6SS2 major cluster promoter (↓)
REG0002 experimental vfu_A02422 (ihfB) T6SS00529 insolico; T6SS00530 insolico protein Transcription regulator Vibrio furnissii NCTC 11218 chromosome (NC_016602) 2516092..2516376 (-) 490864456 tssD2_a promoter (↓); VflT6SS2 major cluster promoter (↓)
REG0063 experimental PA4778 (CueR) T6SS00004 experimental protein Transcription regulator Pseudomonas aeruginosa PAO1 chromosome (NC_002516) 5366257..5366655 (+) 15599972 tssA2 (-173 to -140 relative to the ATG start codon) (↓); hcp2 (-208 to -159 relative to the ATG start codon) (↓)
REG0114 experimental VP0820 (ToxR) T6SS00043 experimental protein Transcription regulator Vibrio parahaemolyticus RIMD 2210633 chromosome (NC_004603) 847892..848770 (-) 28897594 VP1400 promotor (↑); VP1409 promotor (↑)
REG0115 experimental VP0350 (CalR/LeuO) T6SS00044 experimental protein Transcription regulator Vibrio parahaemolyticus RIMD 2210633 chromosome (NC_004603) 344763..345722 (+) 28897124 VPA1027 (hcp2) promotor (↓); VPA1043 (Fha) promotor (↓); VP1133 (H-NS) (↓)
REG0126 experimental BMAA1517 T6SS00070 experimental protein Transcription regulator Burkholderia mallei ATCC 23344 chromosome (NC_006349) 1646532..1647593 (-) 499517952 Hcp1 (BMAA0742) expression (↓)
REG0245 experimental ETAE_3098 (PepA) T6SS00372 experimental protein Transcription regulator Edwardsiella tarda EIB202 chromosome (NC_013508) 3260322..3261833 (+) 502612947 ETAE_0886 (esrB) promoter (↑)
REG0247 experimental ETAE_1505 (H-NS) T6SS00372 experimental protein Transcription regulator Edwardsiella tarda EIB202 chromosome (NC_013508) 1615099..1615506 (-) 505274277 ETAE_2430 (evpB) (↑); evpC promotor (↑)
REG0248 experimental EC042_RS26480 (aggR) T6SS00464 experimental protein Transcription regulator Escherichia coli 042 plasmid (NC_017627) 41080..41877 (-) 446692110 EC042_RS26480 (aggR) promoter (↓); EC042_RS26480 (aggR) promoter (↓)
REG0249 experimental EC042_RS18855 (FIS) T6SS00464 experimental protein Transcription regulator Escherichia coli 042 chromosome (NC_017626) 3772795..3773091 (+) 446385050 EC042_RS26480 (aggR) promoter (↓)
REG0254 experimental HMPREF1171_RS04760 T6SS00788 experimental protein Transcription regulator Aeromonas dhakensis strain SSU chromosome (NZ_JH815591) 1041366..1042904 (+) WP_005299999.1 hcp expression (↓)
REG0268 experimental rpoN T6SS00793 experimental protein Transcription regulator Vibrio alginolyticus strain EPJS chromosome (FJ790776) - - T6SS1 transcript (↓)
REG0269 experimental VasH T6SS00793 experimental protein Transcription regulator Vibrio alginolyticus strain EPJS chromosome (FJ790776) - - T6SS1 transcript (↓)
REG0270 experimental CXG97_03740 (Fur) T6SS00904 experimental protein Transcription regulator Escherichia coli strain ExPEC XM chromosome (NZ_CP025328) 729474..729920 (-) 446053847 T6SS1 (TssB) promotor (↑)
REG0276 experimental V12G01_19736 (TfoX) T6SS00939 experimental protein Transcription regulator Vibrio alginolyticus 12G01 chromosome (AAPS01000019) 47689..48276 (-) 91189146 T6SS2 transcripts (↓)
REG0277 experimental V12G01_20658 (TfoY) T6SS00939 experimental protein Transcription regulator Vibrio alginolyticus 12G01 chromosome (AAPS01000039) 21665..22255 (+) 91188194 T6SS transcripts (↓)
REG0278 experimental V12G01_20201 (H-NS) T6SS00939 experimental protein Transcription regulator Vibrio alginolyticus 12G01 chromosome (AAPS01000015) 63783..64190 (+) 91189474 VaT6SS1 transcripts (↑)
REG0294 experimental VCA1552_RS04890 (ihfA) T6SS01112 experimental protein Transcription regulator Vibrio cholerae strain A1552 chromosome (NZ_CP024867) 1028170..1028466 (+) 447152004 Hcp secretion (↓)
REG0295 experimental VCA1552_RS08565 (ihfB) T6SS01112 experimental protein Transcription regulator Vibrio cholerae strain A1552 chromosome (NZ_CP024867) 1839353..1839631 (-) 446089486 Hcp secretion (↓)
REG0320 experimental VC_A0122 T6SS00002 experimental protein Transcription regulator Vibrio cholerae O1 biovar El Tor str. N16961 chromosome (NC_002506) 137379..137621 (+) 9657509 hcp-2 expression (↓)
REG0329 experimental VPBB_RS05425 (H-NS) T6SS00719 experimental protein Transcription regulator Vibrio parahaemolyticus BB22OP chromosome (NC_019955) 1170475..1170882 (-) 505109423 VgrG1 expression and secretion (↑)
REG0364 experimental Y113_RS11250 (RpoS) T6SS00791 experimental protein Transcription regulator Edwardsiella tarda PPD130/91 chromosome (NZ_JACQ01000026) 9122..10108 (-) 502612732 EvpQ transcription and protein level (↑)
REG0372 experimental BMUL_RS00795 (hns) - protein Transcription regulator Burkholderia multivorans ATCC 17616 chromosome (NC_010084) 179094..179390 (+) WP_006401402.1 T6SS (↑)

Note: in the 'Target' column, ↓ means the target is positively regulated by the regulator, while ↑ indicates negative regulation.
experimental Experimental investigation has been performed.
insolico Bioinformatics investigation has been performed
Regulator ID Locus tag (Gene) Related T6SS Regulator type Regulatory pathway Organism                 Replicon (Accession) Coordinates (Strand) NCBI ID Target (Regulation)