Vibrio cholerae C6706
Experimental investigation has been performed.
Bioinformatics investigation has been performed
T6SS ID | Type | Organism | Replicon (Accession) | Location | Function |
---|---|---|---|---|---|
T6SS01168 | i1 | Vibrio cholerae C6706 | chromosome (NZ_CP046845) | 296505..315674 | anti-bacterial; anti-eukaryotic |
Experimental investigation has been performed.
Bioinformatics investigation has been performed
Experimental investigation has been performed.
Bioinformatics investigation has been performed
Effector ID | Locus tag (Gene) | Classification | Cognate immunity protein | Related T6SS | Organism | Replicon (Accession) | Coordinates (Strand) | NCBI ID |
---|---|---|---|---|---|---|---|---|
EFF01818 | GPY04_RS04830 (TleV1) | Tle | IMU00356 | T6SS01168 | Vibrio cholerae C6706 | chromosome (NZ_CP046844) | 1067605..1069530 (+) | 446298981 |
EFF01819 | GPY04_RS04820 (VgrG-1) | - | - | T6SS01168 | Vibrio cholerae C6706 | chromosome (NZ_CP046844) | 1063272..1066763 (+) | 446134261 |
EFF01820 | GPY04_RS16385 (VasX) | Tme | IMU00357 | T6SS01168 | Vibrio cholerae C6706 | chromosome (NZ_CP046845) | 405867..409124 (-) | 445992499 |
EFF01821 | GPY04_RS15920 | - | IMU00358 | T6SS01168 | Vibrio cholerae C6706 | chromosome (NZ_CP046845) | 291886..294939 (-) | 446035440 |
Experimental investigation has been performed.
Bioinformatics investigation has been performed
Immunity protein ID | Locus tag (Gene) | Related T6SS | Organism | Replicon (Accession) | Coordinates (Strand) | Protein GI | Cognate effector |
---|---|---|---|---|---|---|---|
IMU00356 | GPY04_RS04835 (TsiV1) | T6SS01168 | Vibrio cholerae C6706 | chromosome (NZ_CP046844) | 1069527..1070270 (+) | 446694188 | EFF01819 |
IMU00357 | GPY04_RS16380 (TsiV2) | T6SS01168 | Vibrio cholerae C6706 | chromosome (NZ_CP046845) | 405138..405866 (-) | 446826823 | EFF01821 |
IMU00358 | GPY04_RS15915 (TsiV3) | T6SS01168 | Vibrio cholerae C6706 | chromosome (NZ_CP046845) | 291521..291889 (-) | 446984039 | EFF01821 |
Experimental investigation has been performed.
Bioinformatics investigation has been performed
ID | Locus tag (Gene) | Organism | Replicon (Accession) | Coordinates (Strand) | Protein GI | Response to T6SS attack | Known or putative function |
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Experimental investigation has been performed.
Bioinformatics investigation has been performed
Accessory protein ID | Locus tag (Gene) | Related T6SS | Type | Organism | Replicon (Accession) | Coordinates (Strand) | Protein GI | Related structure protein | Related effector |
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