Detailed information
Bioinformatically predicted
Overview
| Name | comGC | Type | Machinery gene |
| Locus tag | NSQ96_RS11370 | Genome accession | NZ_CP155465 |
| Coordinates | 2297169..2297468 (+) | Length | 99 a.a. |
| NCBI ID | WP_041846282.1 | Uniprot ID | - |
| Organism | Caldifermentibacillus hisashii strain FSL K6-2851 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 2292169..2302468
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NSQ96_RS11350 (NSQ96_11350) | - | 2292469..2293170 (-) | 702 | WP_251241408.1 | helix-turn-helix domain-containing protein | - |
| NSQ96_RS11355 (NSQ96_11355) | - | 2293472..2294785 (-) | 1314 | WP_108897317.1 | IS1380-like element ISBco1 family transposase | - |
| NSQ96_RS11360 (NSQ96_11360) | comGA | 2295051..2296136 (+) | 1086 | WP_034771006.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| NSQ96_RS11365 (NSQ96_11365) | comGB | 2296111..2297142 (+) | 1032 | WP_034771008.1 | competence type IV pilus assembly protein ComGB | - |
| NSQ96_RS11370 (NSQ96_11370) | comGC | 2297169..2297468 (+) | 300 | WP_041846282.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| NSQ96_RS11375 (NSQ96_11375) | comGD | 2297443..2297946 (+) | 504 | WP_251241409.1 | competence type IV pilus minor pilin ComGD | - |
| NSQ96_RS11380 (NSQ96_11380) | - | 2297921..2298277 (+) | 357 | WP_251241410.1 | hypothetical protein | - |
| NSQ96_RS11385 (NSQ96_11385) | comGF | 2298249..2298713 (+) | 465 | WP_341288154.1 | competence type IV pilus minor pilin ComGF | - |
| NSQ96_RS11390 (NSQ96_11390) | comGG | 2298604..2299134 (+) | 531 | WP_341288155.1 | competence type IV pilus minor pilin ComGG | - |
| NSQ96_RS11395 (NSQ96_11395) | - | 2299235..2299420 (+) | 186 | WP_034771024.1 | YqzE family protein | - |
| NSQ96_RS11400 (NSQ96_11400) | - | 2299451..2300575 (-) | 1125 | WP_341288156.1 | hypothetical protein | - |
| NSQ96_RS11405 (NSQ96_11405) | - | 2300744..2301931 (-) | 1188 | WP_108898285.1 | M14 family metallopeptidase | - |
Sequence
Protein
Download Length: 99 a.a. Molecular weight: 11065.08 Da Isoelectric Point: 7.1327
>NTDB_id=996537 NSQ96_RS11370 WP_041846282.1 2297169..2297468(+) (comGC) [Caldifermentibacillus hisashii strain FSL K6-2851]
MLKKESAFTLIEMMIVLFVITILLLITIPNVTKHQKNISNKGCEGLENMVQAEIQAYQIDHNKLPASIDDLKNGYLKEDP
VCPDGRKIVISNGDAVIKK
MLKKESAFTLIEMMIVLFVITILLLITIPNVTKHQKNISNKGCEGLENMVQAEIQAYQIDHNKLPASIDDLKNGYLKEDP
VCPDGRKIVISNGDAVIKK
Nucleotide
Download Length: 300 bp
>NTDB_id=996537 NSQ96_RS11370 WP_041846282.1 2297169..2297468(+) (comGC) [Caldifermentibacillus hisashii strain FSL K6-2851]
ATGTTGAAAAAAGAATCTGCATTTACGTTAATCGAGATGATGATCGTTCTGTTCGTCATCACTATTTTACTGCTTATAAC
CATTCCAAACGTGACAAAACACCAGAAAAATATCAGCAATAAAGGCTGTGAAGGATTAGAAAATATGGTTCAGGCAGAAA
TCCAAGCCTATCAAATTGATCATAATAAATTACCTGCTTCTATTGATGACTTGAAAAACGGATATTTGAAAGAAGACCCG
GTATGTCCGGATGGAAGGAAGATTGTTATCTCTAATGGTGACGCAGTTATCAAAAAGTGA
ATGTTGAAAAAAGAATCTGCATTTACGTTAATCGAGATGATGATCGTTCTGTTCGTCATCACTATTTTACTGCTTATAAC
CATTCCAAACGTGACAAAACACCAGAAAAATATCAGCAATAAAGGCTGTGAAGGATTAGAAAATATGGTTCAGGCAGAAA
TCCAAGCCTATCAAATTGATCATAATAAATTACCTGCTTCTATTGATGACTTGAAAAACGGATATTTGAAAGAAGACCCG
GTATGTCCGGATGGAAGGAAGATTGTTATCTCTAATGGTGACGCAGTTATCAAAAAGTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGC | Bacillus subtilis subsp. subtilis str. 168 |
54.737 |
95.96 |
0.525 |
| comGC | Staphylococcus aureus MW2 |
46.939 |
98.99 |
0.465 |
| comGC | Staphylococcus aureus N315 |
46.939 |
98.99 |
0.465 |