Detailed information
Bioinformatically predicted
Overview
| Name | comGB | Type | Machinery gene |
| Locus tag | AAHT65_RS19770 | Genome accession | NZ_CP154443 |
| Coordinates | 3933045..3934082 (-) | Length | 345 a.a. |
| NCBI ID | WP_106270998.1 | Uniprot ID | - |
| Organism | Bacillus atrophaeus strain SW | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3928045..3939082
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AAHT65_RS19720 (AAHT65_19715) | - | 3928202..3928984 (-) | 783 | WP_063638541.1 | biofilm matrix protein TasA | - |
| AAHT65_RS19725 (AAHT65_19720) | - | 3929048..3929620 (-) | 573 | WP_010789195.1 | signal peptidase I SipW | - |
| AAHT65_RS19730 (AAHT65_19725) | tapA | 3929604..3930305 (-) | 702 | WP_343310698.1 | amyloid fiber anchoring/assembly protein TapA | - |
| AAHT65_RS19735 (AAHT65_19730) | - | 3930567..3930890 (+) | 324 | WP_106271001.1 | DUF3889 domain-containing protein | - |
| AAHT65_RS19740 (AAHT65_19735) | - | 3930937..3931116 (-) | 180 | WP_003325435.1 | YqzE family protein | - |
| AAHT65_RS19745 (AAHT65_19740) | comGG | 3931186..3931560 (-) | 375 | WP_106270999.1 | competence type IV pilus minor pilin ComGG | Machinery gene |
| AAHT65_RS19750 (AAHT65_19745) | comGF | 3931561..3932067 (-) | 507 | WP_274379311.1 | competence type IV pilus minor pilin ComGF | - |
| AAHT65_RS19755 (AAHT65_19750) | comGE | 3931970..3932317 (-) | 348 | WP_003325432.1 | competence type IV pilus minor pilin ComGE | Machinery gene |
| AAHT65_RS19760 (AAHT65_19755) | comGD | 3932301..3932741 (-) | 441 | WP_343310699.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| AAHT65_RS19765 (AAHT65_19760) | comGC | 3932731..3933039 (-) | 309 | WP_087941811.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| AAHT65_RS19770 (AAHT65_19765) | comGB | 3933045..3934082 (-) | 1038 | WP_106270998.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| AAHT65_RS19775 (AAHT65_19770) | comGA | 3934069..3935139 (-) | 1071 | WP_088117573.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| AAHT65_RS19780 (AAHT65_19775) | - | 3935519..3936472 (-) | 954 | WP_088117575.1 | magnesium transporter CorA family protein | - |
| AAHT65_RS19785 (AAHT65_19780) | - | 3936584..3937942 (+) | 1359 | WP_088117576.1 | hemolysin family protein | - |
| AAHT65_RS19790 (AAHT65_19785) | - | 3938009..3938860 (-) | 852 | WP_088117577.1 | STAS domain-containing protein | - |
Sequence
Protein
Download Length: 345 a.a. Molecular weight: 40130.33 Da Isoelectric Point: 9.6748
>NTDB_id=993464 AAHT65_RS19770 WP_106270998.1 3933045..3934082(-) (comGB) [Bacillus atrophaeus strain SW]
MKRIKKSWPINDQANLLNRLGDMTENGYNLLDGLRLMELQMNKRQRTEMSAAVNRLREGEPFYQVLQALAFHKEAVSICY
LAEMHGELSVAMRQSGGLLERKLTQANQLKKVIRYPIFLIFTVFVMFYILQAVIIPQFSGVYQSMNMETSRTTAVIFAFF
QHVHYAVIGFVLLALGAALYYWFGFKKKSPADKMLFFVRIPILGRLVILFNSYFFSLQLSSLLKSGLSIYDSLKAFKEQS
FLPFYRQEAEQIINQLRAGESIDRALYKHPCYENDFCEVVLHGQLSGQLHRELFTYSQFLMERLERKVEKWTGILQPVIY
GIVAGMILIVYLSMLMPMYQMMNQL
MKRIKKSWPINDQANLLNRLGDMTENGYNLLDGLRLMELQMNKRQRTEMSAAVNRLREGEPFYQVLQALAFHKEAVSICY
LAEMHGELSVAMRQSGGLLERKLTQANQLKKVIRYPIFLIFTVFVMFYILQAVIIPQFSGVYQSMNMETSRTTAVIFAFF
QHVHYAVIGFVLLALGAALYYWFGFKKKSPADKMLFFVRIPILGRLVILFNSYFFSLQLSSLLKSGLSIYDSLKAFKEQS
FLPFYRQEAEQIINQLRAGESIDRALYKHPCYENDFCEVVLHGQLSGQLHRELFTYSQFLMERLERKVEKWTGILQPVIY
GIVAGMILIVYLSMLMPMYQMMNQL
Nucleotide
Download Length: 1038 bp
>NTDB_id=993464 AAHT65_RS19770 WP_106270998.1 3933045..3934082(-) (comGB) [Bacillus atrophaeus strain SW]
ATGAAGAGGATTAAAAAAAGCTGGCCGATAAACGATCAAGCTAATTTGCTAAACAGACTCGGTGACATGACAGAAAACGG
ATACAATCTTCTGGATGGATTGCGGTTAATGGAACTGCAAATGAATAAGCGTCAGCGTACGGAAATGTCTGCTGCTGTAA
ATCGTTTACGAGAGGGGGAACCATTCTATCAGGTTTTGCAGGCTTTGGCTTTCCACAAGGAAGCCGTCAGCATTTGTTAT
TTAGCAGAAATGCATGGAGAATTGTCCGTTGCTATGAGGCAAAGCGGTGGGCTGTTGGAAAGGAAATTAACACAGGCCAA
TCAGCTGAAAAAAGTCATCCGTTATCCGATTTTCCTGATCTTCACTGTCTTTGTGATGTTTTATATCCTGCAAGCTGTCA
TCATCCCGCAATTTTCAGGAGTTTATCAGTCCATGAATATGGAAACCTCACGCACAACCGCTGTTATATTCGCTTTTTTT
CAGCACGTTCATTATGCAGTGATTGGTTTTGTCTTGCTTGCTCTCGGAGCGGCGCTCTATTACTGGTTTGGATTTAAGAA
GAAGTCCCCGGCAGACAAAATGCTCTTTTTTGTACGGATACCCATACTCGGAAGACTTGTCATTTTATTTAACAGCTACT
TTTTTTCTTTGCAGCTCAGCAGCCTATTAAAGTCTGGACTGTCTATTTACGACAGCCTTAAGGCCTTTAAAGAGCAATCG
TTCCTCCCTTTTTACCGTCAGGAGGCAGAACAAATCATTAACCAATTAAGGGCTGGAGAGTCCATAGATAGAGCTCTGTA
TAAACACCCATGCTATGAAAATGACTTTTGTGAAGTGGTGCTGCACGGCCAATTAAGCGGGCAGCTGCATCGTGAACTAT
TCACCTACAGCCAGTTTTTAATGGAGCGGCTGGAGCGAAAGGTTGAAAAATGGACGGGAATCCTTCAGCCCGTCATCTAC
GGTATTGTTGCCGGAATGATTTTAATTGTGTATTTGTCGATGCTTATGCCTATGTATCAGATGATGAATCAATTGTAG
ATGAAGAGGATTAAAAAAAGCTGGCCGATAAACGATCAAGCTAATTTGCTAAACAGACTCGGTGACATGACAGAAAACGG
ATACAATCTTCTGGATGGATTGCGGTTAATGGAACTGCAAATGAATAAGCGTCAGCGTACGGAAATGTCTGCTGCTGTAA
ATCGTTTACGAGAGGGGGAACCATTCTATCAGGTTTTGCAGGCTTTGGCTTTCCACAAGGAAGCCGTCAGCATTTGTTAT
TTAGCAGAAATGCATGGAGAATTGTCCGTTGCTATGAGGCAAAGCGGTGGGCTGTTGGAAAGGAAATTAACACAGGCCAA
TCAGCTGAAAAAAGTCATCCGTTATCCGATTTTCCTGATCTTCACTGTCTTTGTGATGTTTTATATCCTGCAAGCTGTCA
TCATCCCGCAATTTTCAGGAGTTTATCAGTCCATGAATATGGAAACCTCACGCACAACCGCTGTTATATTCGCTTTTTTT
CAGCACGTTCATTATGCAGTGATTGGTTTTGTCTTGCTTGCTCTCGGAGCGGCGCTCTATTACTGGTTTGGATTTAAGAA
GAAGTCCCCGGCAGACAAAATGCTCTTTTTTGTACGGATACCCATACTCGGAAGACTTGTCATTTTATTTAACAGCTACT
TTTTTTCTTTGCAGCTCAGCAGCCTATTAAAGTCTGGACTGTCTATTTACGACAGCCTTAAGGCCTTTAAAGAGCAATCG
TTCCTCCCTTTTTACCGTCAGGAGGCAGAACAAATCATTAACCAATTAAGGGCTGGAGAGTCCATAGATAGAGCTCTGTA
TAAACACCCATGCTATGAAAATGACTTTTGTGAAGTGGTGCTGCACGGCCAATTAAGCGGGCAGCTGCATCGTGAACTAT
TCACCTACAGCCAGTTTTTAATGGAGCGGCTGGAGCGAAAGGTTGAAAAATGGACGGGAATCCTTCAGCCCGTCATCTAC
GGTATTGTTGCCGGAATGATTTTAATTGTGTATTTGTCGATGCTTATGCCTATGTATCAGATGATGAATCAATTGTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGB | Bacillus subtilis subsp. subtilis str. 168 |
69.35 |
93.623 |
0.649 |