Detailed information
Bioinformatically predicted
Overview
| Name | pilN | Type | Machinery gene |
| Locus tag | MWM13_RS07655 | Genome accession | NZ_AP025609 |
| Coordinates | 1441506..1442129 (+) | Length | 207 a.a. |
| NCBI ID | WP_011173433.1 | Uniprot ID | Q72IW7 |
| Organism | Thermus thermophilus strain SNM3-3 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1436506..1447129
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MWM13_RS07635 (TthSNM33_15120) | - | 1437238..1438644 (+) | 1407 | WP_244347536.1 | HD domain-containing phosphohydrolase | - |
| MWM13_RS07640 (TthSNM33_15130) | - | 1438695..1439186 (+) | 492 | WP_011173430.1 | DUF5317 domain-containing protein | - |
| MWM13_RS07645 (TthSNM33_15140) | - | 1439241..1440245 (+) | 1005 | WP_244347537.1 | homoisocitrate dehydrogenase | - |
| MWM13_RS07650 (TthSNM33_15150) | pilM | 1440380..1441513 (+) | 1134 | WP_244347538.1 | type IV pilus assembly protein PilM | Machinery gene |
| MWM13_RS07655 (TthSNM33_15160) | pilN | 1441506..1442129 (+) | 624 | WP_011173433.1 | competence protein | Machinery gene |
| MWM13_RS07660 (TthSNM33_15170) | pilO | 1442119..1442700 (+) | 582 | WP_011173434.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| MWM13_RS07665 (TthSNM33_15180) | pilW | 1442697..1443575 (+) | 879 | WP_244344967.1 | competence protein | Machinery gene |
| MWM13_RS07670 (TthSNM33_15190) | pilQ | 1443572..1445845 (+) | 2274 | WP_244347539.1 | secretin N-terminal domain-containing protein | Machinery gene |
| MWM13_RS07675 (TthSNM33_15200) | aroC | 1445904..1447055 (+) | 1152 | WP_011228640.1 | chorismate synthase | - |
Sequence
Protein
Download Length: 207 a.a. Molecular weight: 23035.51 Da Isoelectric Point: 9.7530
>NTDB_id=93017 MWM13_RS07655 WP_011173433.1 1441506..1442129(+) (pilN) [Thermus thermophilus strain SNM3-3]
MIRLNLLPKNLRRRVEPGWWRLLALLFALVVLGVLGLVHYTAYTELSLAKAERDQLQAEVEALRPFIAELGRLQEERKAL
EALLAIREGLEKNAVPWSQYLAAFINQIPRAGGRLEVALRSVSARALSEEEAARLAQEGTYDGKRIRVEFALQGEALSRE
ALVRFIRAFETSPRFGIEFQGASLDEGRGLYTFSARVGATGGESGAR
MIRLNLLPKNLRRRVEPGWWRLLALLFALVVLGVLGLVHYTAYTELSLAKAERDQLQAEVEALRPFIAELGRLQEERKAL
EALLAIREGLEKNAVPWSQYLAAFINQIPRAGGRLEVALRSVSARALSEEEAARLAQEGTYDGKRIRVEFALQGEALSRE
ALVRFIRAFETSPRFGIEFQGASLDEGRGLYTFSARVGATGGESGAR
Nucleotide
Download Length: 624 bp
>NTDB_id=93017 MWM13_RS07655 WP_011173433.1 1441506..1442129(+) (pilN) [Thermus thermophilus strain SNM3-3]
TTGATTAGGCTGAACCTTCTCCCCAAAAACCTCCGGCGCCGGGTGGAGCCGGGCTGGTGGCGCCTCCTCGCCCTCCTCTT
CGCCCTCGTGGTCCTCGGGGTCTTGGGGCTCGTCCACTACACCGCCTACACCGAGCTCTCCCTGGCCAAGGCGGAGCGGG
ACCAGCTCCAGGCGGAGGTGGAGGCCTTGAGGCCCTTCATCGCCGAACTCGGCCGCCTGCAGGAGGAGCGCAAGGCCCTC
GAGGCCCTCCTCGCCATCCGGGAAGGCCTGGAGAAAAACGCCGTGCCCTGGTCCCAGTACCTGGCCGCCTTCATCAACCA
GATCCCCAGGGCGGGGGGGCGCCTCGAGGTGGCCCTTCGCTCGGTGAGCGCCCGCGCCCTCTCGGAAGAGGAGGCCGCCC
GCCTGGCCCAGGAAGGCACCTACGACGGCAAGCGGATCCGGGTGGAGTTCGCCCTCCAGGGGGAGGCCCTGAGCCGGGAG
GCCCTGGTCCGGTTCATCCGGGCCTTTGAGACCTCCCCCCGGTTCGGCATTGAGTTCCAGGGGGCCTCCCTGGACGAGGG
CCGGGGGCTTTACACCTTCAGCGCCCGCGTGGGCGCAACGGGGGGTGAAAGCGGTGCTCGCTAG
TTGATTAGGCTGAACCTTCTCCCCAAAAACCTCCGGCGCCGGGTGGAGCCGGGCTGGTGGCGCCTCCTCGCCCTCCTCTT
CGCCCTCGTGGTCCTCGGGGTCTTGGGGCTCGTCCACTACACCGCCTACACCGAGCTCTCCCTGGCCAAGGCGGAGCGGG
ACCAGCTCCAGGCGGAGGTGGAGGCCTTGAGGCCCTTCATCGCCGAACTCGGCCGCCTGCAGGAGGAGCGCAAGGCCCTC
GAGGCCCTCCTCGCCATCCGGGAAGGCCTGGAGAAAAACGCCGTGCCCTGGTCCCAGTACCTGGCCGCCTTCATCAACCA
GATCCCCAGGGCGGGGGGGCGCCTCGAGGTGGCCCTTCGCTCGGTGAGCGCCCGCGCCCTCTCGGAAGAGGAGGCCGCCC
GCCTGGCCCAGGAAGGCACCTACGACGGCAAGCGGATCCGGGTGGAGTTCGCCCTCCAGGGGGAGGCCCTGAGCCGGGAG
GCCCTGGTCCGGTTCATCCGGGCCTTTGAGACCTCCCCCCGGTTCGGCATTGAGTTCCAGGGGGCCTCCCTGGACGAGGG
CCGGGGGCTTTACACCTTCAGCGCCCGCGTGGGCGCAACGGGGGGTGAAAGCGGTGCTCGCTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilN | Thermus thermophilus HB27 |
100 |
100 |
1 |