Detailed information
Bioinformatically predicted
Overview
| Name | pilP | Type | Machinery gene |
| Locus tag | OCV30_RS14195 | Genome accession | NZ_AP025460 |
| Coordinates | 3138707..3139225 (-) | Length | 172 a.a. |
| NCBI ID | WP_065679725.1 | Uniprot ID | A0A1C3IY90 |
| Organism | Vibrio atlanticus strain CECT 7223 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3133707..3144225
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OCV30_RS14180 | aroB | 3135145..3136233 (-) | 1089 | WP_009848908.1 | 3-dehydroquinate synthase | - |
| OCV30_RS14185 | aroK | 3136258..3136776 (-) | 519 | WP_009848907.1 | shikimate kinase AroK | - |
| OCV30_RS14190 | pilQ | 3136953..3138671 (-) | 1719 | WP_017103612.1 | type IV pilus secretin PilQ | Machinery gene |
| OCV30_RS14195 | pilP | 3138707..3139225 (-) | 519 | WP_065679725.1 | pilus assembly protein PilP | Machinery gene |
| OCV30_RS14200 | pilO | 3139212..3139841 (-) | 630 | WP_012604947.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| OCV30_RS14205 | pilN | 3139834..3140448 (-) | 615 | WP_065679726.1 | PilN domain-containing protein | Machinery gene |
| OCV30_RS14210 | pilM | 3140432..3141457 (-) | 1026 | WP_065679727.1 | type IV pilus assembly protein PilM | Machinery gene |
| OCV30_RS14215 | - | 3141609..3144167 (+) | 2559 | WP_065679728.1 | penicillin-binding protein 1A | - |
Sequence
Protein
Download Length: 172 a.a. Molecular weight: 19206.47 Da Isoelectric Point: 10.6570
>NTDB_id=91662 OCV30_RS14195 WP_065679725.1 3138707..3139225(-) (pilP) [Vibrio atlanticus strain CECT 7223]
MKFSSVLLSLLLLLVLSGCKASQDSLEDFVRQVEAKARKEVEKLVPETEFLAATYQRHAFRPPFELPKEAMVQNQPLVKK
DCWQPSARSRNGKLEKYPLSKLRLRGVMGSGTSVSGLVQTPKGNVVNVKKGQFIGLNNGRVTKVTSQYVQINETLPDGLG
CWHKRNVKLALK
MKFSSVLLSLLLLLVLSGCKASQDSLEDFVRQVEAKARKEVEKLVPETEFLAATYQRHAFRPPFELPKEAMVQNQPLVKK
DCWQPSARSRNGKLEKYPLSKLRLRGVMGSGTSVSGLVQTPKGNVVNVKKGQFIGLNNGRVTKVTSQYVQINETLPDGLG
CWHKRNVKLALK
Nucleotide
Download Length: 519 bp
>NTDB_id=91662 OCV30_RS14195 WP_065679725.1 3138707..3139225(-) (pilP) [Vibrio atlanticus strain CECT 7223]
ATGAAATTCAGTAGCGTCCTTTTGTCCCTATTGTTACTGCTTGTGCTTTCAGGCTGTAAAGCCAGTCAGGATTCGTTAGA
AGATTTTGTGAGGCAAGTTGAAGCTAAGGCGAGAAAAGAGGTAGAAAAACTTGTCCCAGAAACGGAGTTCTTAGCCGCAA
CTTATCAACGCCACGCCTTTCGCCCTCCCTTTGAACTTCCTAAAGAAGCCATGGTTCAAAATCAACCCTTGGTGAAGAAA
GATTGTTGGCAGCCAAGCGCACGCTCTCGCAATGGCAAGCTAGAAAAATACCCGCTGAGTAAGCTGCGTTTAAGAGGCGT
AATGGGCAGTGGAACAAGCGTTTCAGGGTTAGTACAAACCCCAAAAGGGAACGTGGTCAATGTGAAAAAAGGTCAGTTTA
TTGGCTTAAACAATGGTCGAGTTACTAAGGTGACGAGCCAGTATGTACAGATTAATGAAACCCTTCCAGATGGTTTAGGT
TGTTGGCATAAGCGCAACGTTAAGCTCGCTCTGAAGTAA
ATGAAATTCAGTAGCGTCCTTTTGTCCCTATTGTTACTGCTTGTGCTTTCAGGCTGTAAAGCCAGTCAGGATTCGTTAGA
AGATTTTGTGAGGCAAGTTGAAGCTAAGGCGAGAAAAGAGGTAGAAAAACTTGTCCCAGAAACGGAGTTCTTAGCCGCAA
CTTATCAACGCCACGCCTTTCGCCCTCCCTTTGAACTTCCTAAAGAAGCCATGGTTCAAAATCAACCCTTGGTGAAGAAA
GATTGTTGGCAGCCAAGCGCACGCTCTCGCAATGGCAAGCTAGAAAAATACCCGCTGAGTAAGCTGCGTTTAAGAGGCGT
AATGGGCAGTGGAACAAGCGTTTCAGGGTTAGTACAAACCCCAAAAGGGAACGTGGTCAATGTGAAAAAAGGTCAGTTTA
TTGGCTTAAACAATGGTCGAGTTACTAAGGTGACGAGCCAGTATGTACAGATTAATGAAACCCTTCCAGATGGTTTAGGT
TGTTGGCATAAGCGCAACGTTAAGCTCGCTCTGAAGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilP | Vibrio cholerae strain A1552 |
64.535 |
100 |
0.645 |
| pilP | Vibrio campbellii strain DS40M4 |
56.627 |
96.512 |
0.547 |