Detailed information NTG0883729

Bioinformatically predicted

Overview

• Name: chiS
• Type: Regulator
• Locus tag: RI132_RS11875
• Genome accession: NZ_CP134783
• Coordinates: 2569544..2572933 (+)
• Length: 1129 a.a.
• NCBI ID: WP_072616566.1
• Uniprot ID: -
• Organism: Vibrio vulnificus strain GCU-01
• Function: chitin sensor (predicted from homology) Competence regulation

Genomic Context

Location: 2564544..2577933

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RI132_RS11855 (RI132_11855)	erpA	2564943..2565284 (-)	342	WP_026130638.1	iron-sulfur cluster insertion protein ErpA	-
RI132_RS11860 (RI132_11860)	hemL	2565571..2566866 (+)	1296	WP_011079597.1	glutamate-1-semialdehyde 2,1-aminomutase	-
RI132_RS11865 (RI132_11865)	-	2567116..2568201 (+)	1086	WP_011079596.1	AI-2E family transporter	-
RI132_RS11870 (RI132_11870)	rsmC	2568275..2569297 (+)	1023	WP_047108778.1	16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC	-
RI132_RS11875 (RI132_11875)	chiS	2569544..2572933 (+)	3390	WP_072616566.1	response regulator	Regulator
RI132_RS11880 (RI132_11880)	-	2573875..2575548 (+)	1674	WP_011079593.1	ABC transporter substrate-binding protein	-
RI132_RS11885 (RI132_11885)	-	2575717..2576703 (+)	987	WP_011079592.1	ABC transporter permease	-
RI132_RS11890 (RI132_11890)	-	2576706..2577731 (+)	1026	WP_011079591.1	ABC transporter permease	-

Sequence

Protein

• Length: 1129 a.a.
• Molecular weight: 127477.45 Da
• Isoelectric Point: 5.8920

>NTDB_id=883729 RI132_RS11875 WP_072616566.1 2569544..2572933(+) (chiS) [Vibrio vulnificus strain GCU-01]
MFKFYRKQKFKRLQSTLMTAFLVLSITPLTITAIFFLQSHSKDLQEQSTSHLLSVRDTKQQQILDYFQAQETEVMGFVRS
ELAYASGGRFYGLVNAFKSLGVDMEQARENAQQRYIQGSGDQIKTSILPESSSFVGSERYRLLHKRYHWAYLELLKRSDF
DDILLVDLDGNVTYSIYKNENFGTNLIEGPFKESMLGKSFRQLANDVSEKRKQNEDYTPVYISDFSVEDGKQVAWLGAPI
IQQGYLHSYAMFRLPNNGITKLIADINKDAAIHTLLVGSDHLPRTMTTKQTDIESSIEVVDKALAGLTDVGTYINSSGEA
TIAAYAPISFKGQTWALVVQLPEKEAFARIHQLEKLFVIAMLIAIVLVFISSHYLSNFITSPLLKLTWAAERVSAGDLDE
NMINTERKDEIGRLAISFERMQRSIRDKIQLIKTQNAELEKNLQLIQKQNDELQLADKLKDEFLATTSHELRTPLHGMIG
IAETLISGANGPLPSNQRYQLDIIIKSGQRLATLVDDLLDYHKMRYGSLDIQKSAVNLASATRLVLELSHHLLGNKTLRI
INQVSNDVAPVSADPQRLEQVLYNLIGNAIKYTTEGKIVISANVVDDKVRVQVVDTGQGIPAEQLEHIFEPLIQAGRDSG
RYRQGAGLGLSISRQLIELMGGSLYVSSQPMVGTTFSFTLPLASADEISATEVMQNQHHFQAPDSNELISLDNSSLPENP
NGPLLIVADDEPVNLRVLESFLRIEGYRVQTASDGPDTLELIEHEKPALLLLDIMMPGMSGYQVCHQLRQQYDMAELPII
MLTALSQSEDRVRGFEAGANDYLTKPFNKQELAARIKAHLMASKAEARRLENNRLEAELRQRAMVEASLLETQGRLLEQL
ESAPEAIICIREDKRIRFANDAACKLFKRSLEQLKRSNAEELIAPKYLTVKQQHYCGNIDIYVDDVRQHIETDILKLPEG
SGLDAMFIFNVGGGAAASRVHNLETAVEVLSSYAFDGDKERLQSLKELGGEFTRLADKALGTNKNKQELMREVLVDLMTH
ALDYWESVTGENKFTFAEQSGLWRVYLDRSTLQTRTLDKYMRIETLPKTPRWRTVLSSIEYILEHCKEQSPERTYIEMQR
DKLQRLLTS

Nucleotide

• Length: 3390 bp

>NTDB_id=883729 RI132_RS11875 WP_072616566.1 2569544..2572933(+) (chiS) [Vibrio vulnificus strain GCU-01]
ATGTTTAAGTTTTATCGCAAACAGAAGTTTAAACGCCTTCAAAGCACTCTGATGACTGCATTTTTGGTGCTGAGTATCAC
GCCATTAACCATCACAGCGATTTTCTTTTTGCAATCACACAGTAAAGATCTCCAAGAGCAGAGCACTTCTCACCTGCTTT
CTGTTCGAGACACCAAACAACAACAGATCCTGGATTATTTCCAAGCACAAGAAACGGAAGTGATGGGATTTGTTCGTTCA
GAGTTGGCTTACGCGAGTGGTGGCCGATTTTACGGGCTTGTCAACGCCTTCAAAAGCTTAGGCGTGGATATGGAACAGGC
TCGAGAAAACGCTCAACAGCGCTATATTCAGGGGTCTGGCGATCAAATAAAAACGTCGATTTTGCCGGAATCCAGCTCTT
TTGTTGGTAGTGAACGCTACCGTTTACTGCATAAGCGCTATCACTGGGCCTATTTGGAGCTTTTGAAGCGCTCCGATTTT
GACGATATTTTGTTGGTGGATCTCGATGGCAACGTCACCTACTCCATCTACAAAAATGAAAACTTTGGCACAAACTTAAT
TGAAGGGCCTTTTAAAGAGAGCATGCTCGGCAAAAGCTTTCGTCAGTTGGCCAATGACGTCAGCGAAAAACGCAAGCAAA
ACGAAGACTATACCCCCGTCTATATTTCCGACTTCTCGGTTGAAGATGGCAAACAAGTCGCTTGGTTGGGTGCACCGATC
ATCCAGCAAGGCTATCTGCACAGCTACGCCATGTTCAGGCTACCCAACAATGGCATCACCAAACTGATTGCAGACATCAA
TAAAGATGCAGCTATCCACACTTTGCTGGTTGGAAGTGACCACTTACCTCGCACGATGACCACAAAGCAAACCGATATCG
AAAGCAGTATTGAAGTGGTCGATAAGGCACTCGCGGGACTGACGGATGTGGGGACTTATATCAACAGCAGCGGTGAGGCG
ACCATCGCCGCCTATGCGCCAATTTCATTCAAAGGTCAAACCTGGGCTTTAGTGGTTCAGTTGCCGGAGAAAGAAGCGTT
TGCACGCATTCATCAGTTAGAAAAACTGTTCGTCATCGCTATGTTGATTGCAATCGTGCTGGTGTTTATCTCATCTCACT
ACTTATCGAATTTCATCACCTCACCACTACTCAAACTCACTTGGGCTGCAGAGCGCGTTTCTGCAGGTGATCTCGATGAA
AACATGATTAATACCGAGCGCAAAGATGAAATTGGCCGTTTAGCGATCAGTTTTGAACGAATGCAACGCTCTATTCGCGA
TAAAATTCAGCTCATTAAAACGCAAAATGCGGAGCTAGAGAAAAATCTACAACTGATTCAAAAGCAAAATGACGAATTGC
AATTGGCCGATAAGCTCAAAGATGAATTTTTGGCGACGACCTCTCATGAGCTACGCACTCCACTGCATGGTATGATTGGT
ATTGCAGAAACCCTCATCTCAGGGGCAAACGGCCCACTGCCCTCCAACCAGCGCTATCAACTGGACATCATTATTAAGAG
TGGCCAGCGCTTAGCTACGCTTGTGGATGACTTGCTCGACTACCACAAAATGCGCTATGGCAGTTTGGATATTCAAAAAT
CCGCCGTCAATTTGGCCAGTGCGACTCGACTGGTATTAGAGCTCTCTCACCATTTATTGGGCAACAAAACTCTGCGCATC
ATTAATCAGGTTTCTAACGATGTTGCGCCGGTATCTGCCGATCCACAGCGATTAGAACAGGTGCTGTATAACCTTATTGG
CAACGCGATCAAATACACCACTGAAGGGAAAATCGTCATTTCCGCCAATGTGGTTGACGATAAAGTTCGAGTGCAAGTCG
TCGATACCGGCCAAGGCATTCCCGCAGAACAGTTAGAGCATATTTTCGAACCGCTCATTCAAGCTGGTCGCGACTCTGGT
CGTTATCGCCAAGGTGCAGGTCTGGGGCTTTCCATTAGCCGTCAGCTGATCGAGTTAATGGGAGGATCGCTCTACGTCAG
CAGTCAACCCATGGTTGGCACCACCTTTAGCTTCACCTTGCCATTGGCCAGCGCAGACGAAATCAGTGCCACGGAAGTCA
TGCAAAATCAACATCACTTCCAAGCGCCAGATAGCAATGAATTGATCTCATTAGATAATTCATCACTGCCAGAAAATCCC
AATGGTCCGCTACTGATTGTGGCCGATGATGAACCCGTCAACTTACGCGTGCTTGAAAGTTTCCTACGCATCGAAGGGTA
CCGAGTGCAAACGGCCTCAGATGGCCCAGACACTCTCGAACTCATTGAACATGAAAAACCCGCCTTGCTGTTGCTCGACA
TCATGATGCCGGGCATGAGCGGTTATCAAGTTTGCCATCAACTCCGACAGCAATACGACATGGCAGAGTTGCCTATTATC
ATGCTAACGGCGTTGAGTCAGAGCGAAGATCGCGTGCGAGGATTCGAAGCTGGAGCCAATGATTACTTAACCAAACCATT
TAATAAGCAAGAGCTTGCGGCCCGAATTAAAGCACATTTAATGGCAAGTAAAGCAGAAGCTCGTCGCTTGGAAAACAATC
GCCTTGAAGCGGAGCTTCGCCAACGTGCAATGGTGGAAGCAAGCTTACTGGAAACACAAGGGCGTTTATTAGAACAATTG
GAATCTGCCCCAGAAGCCATCATCTGTATTCGTGAAGATAAGCGTATTCGCTTTGCCAATGACGCGGCCTGTAAACTGTT
CAAACGCAGCTTAGAGCAGCTCAAGCGCTCAAACGCAGAAGAACTTATTGCTCCCAAATATTTAACCGTCAAACAGCAGC
ATTATTGCGGCAATATCGATATCTATGTCGACGATGTTCGACAGCATATTGAAACGGACATCCTTAAATTACCAGAAGGG
TCAGGCCTTGATGCCATGTTTATCTTTAATGTCGGGGGAGGCGCTGCTGCTTCTCGTGTGCACAACCTAGAAACCGCCGT
GGAAGTCCTTTCAAGCTATGCCTTTGATGGTGACAAAGAGCGCTTACAGAGTCTCAAAGAGCTAGGGGGAGAATTTACTC
GCTTGGCCGACAAAGCACTGGGTACCAATAAGAATAAGCAAGAGCTGATGCGTGAAGTTCTCGTGGATTTGATGACGCAT
GCACTCGATTATTGGGAGTCAGTGACAGGTGAAAACAAATTTACCTTTGCTGAACAAAGTGGTTTATGGCGCGTTTATCT
CGACCGCAGCACGCTACAAACTCGCACGCTCGATAAATACATGCGTATTGAAACCTTGCCAAAAACGCCGCGTTGGAGAA
CCGTGTTGAGTTCTATTGAGTACATTCTGGAGCACTGTAAAGAGCAAAGTCCTGAGCGTACTTACATTGAGATGCAGCGA
GATAAATTACAACGCCTGCTCACCAGCTAA

Domains

Predicted by InterproScan.

• Response regulator receiver domain (Response_reg) (726-837)

• His Kinase A (phospho-acceptor) domain (HisKA) (460-525)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (574-683)

• PAS fold (PAS) (877-926)

• HAMP domain (HAMP) (375-427)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
chiS	Vibrio cholerae strain A1552	77.236	100	0.772