Detailed information
Bioinformatically predicted
Overview
| Name | recA | Type | Machinery gene |
| Locus tag | WAE38_RS09135 | Genome accession | NZ_CP147984 |
| Coordinates | 1819603..1820721 (+) | Length | 372 a.a. |
| NCBI ID | WP_021112712.1 | Uniprot ID | - |
| Organism | Glaesserella parasuis strain H16SD2BY4 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 1814603..1825721
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| WAE38_RS09110 (WAE38_09110) | dusA | 1815516..1816487 (-) | 972 | WP_279406291.1 | tRNA dihydrouridine(20/20a) synthase DusA | - |
| WAE38_RS09115 (WAE38_09115) | tehB | 1816602..1817465 (-) | 864 | WP_021112753.1 | SAM-dependent methyltransferase TehB | - |
| WAE38_RS09120 (WAE38_09120) | - | 1817689..1817883 (-) | 195 | Protein_1772 | cation transporter | - |
| WAE38_RS09125 (WAE38_09125) | - | 1817916..1818887 (+) | 972 | WP_203399184.1 | aminodeoxychorismate synthase component I | - |
| WAE38_RS09130 (WAE38_09130) | - | 1818865..1819470 (+) | 606 | WP_160429816.1 | aminotransferase class IV family protein | - |
| WAE38_RS09135 (WAE38_09135) | recA | 1819603..1820721 (+) | 1119 | WP_021112712.1 | recombinase RecA | Machinery gene |
| WAE38_RS09140 (WAE38_09140) | recX | 1820774..1821229 (+) | 456 | WP_005713086.1 | recombination regulator RecX | - |
| WAE38_RS09145 (WAE38_09145) | yqfB | 1821222..1821527 (+) | 306 | WP_005713088.1 | N(4)-acetylcytidine aminohydrolase | - |
| WAE38_RS09150 (WAE38_09150) | - | 1821535..1822065 (+) | 531 | WP_021112716.1 | topoisomerase DNA-binding C4 zinc finger domain-containing protein | - |
| WAE38_RS09155 (WAE38_09155) | - | 1822065..1822619 (+) | 555 | WP_005713092.1 | Sua5/YciO/YrdC/YwlC family protein | - |
| WAE38_RS09160 (WAE38_09160) | aroE | 1822623..1823441 (+) | 819 | WP_338823661.1 | shikimate dehydrogenase | - |
| WAE38_RS09185 (WAE38_09185) | - | 1824126..1824386 (+) | 261 | WP_005713096.1 | accessory factor UbiK family protein | - |
Sequence
Protein
Download Length: 372 a.a. Molecular weight: 40277.89 Da Isoelectric Point: 4.7724
>NTDB_id=863477 WAE38_RS09135 WP_021112712.1 1819603..1820721(+) (recA) [Glaesserella parasuis strain H16SD2BY4]
MAENKKSSKNNTVVKQVEPEQKKQALEAALAQIEKQFGKGSIMKLGQTEQLDIESVSTGSLGLDLALGIGGLPMGRIVEI
YGPESSGKTTLTLSLIAQAQKGNKTCAFIDAEHALDPVYARNLGVNTDELLISQPDNGEQALEICDALVRSGAVDVIIVD
SVAALTPKAEIEGDMGDSHMGLQARLMSQALRKLTANIKNTNCLVVFINQIRMKIGVMFGNPETTTGGNALKFYASVRLD
IRRCGVVKDGDEIIGSETKVKVVKNKVAPPFREVQFDIMYGEGISRMNELLILAEANGFIKKSGAWFSYDGTKIGQGKNN
AVKWLKENPEIADKLEQEIRNTLASNPNSVLKATASDSNDESDVEEFSEEEL
MAENKKSSKNNTVVKQVEPEQKKQALEAALAQIEKQFGKGSIMKLGQTEQLDIESVSTGSLGLDLALGIGGLPMGRIVEI
YGPESSGKTTLTLSLIAQAQKGNKTCAFIDAEHALDPVYARNLGVNTDELLISQPDNGEQALEICDALVRSGAVDVIIVD
SVAALTPKAEIEGDMGDSHMGLQARLMSQALRKLTANIKNTNCLVVFINQIRMKIGVMFGNPETTTGGNALKFYASVRLD
IRRCGVVKDGDEIIGSETKVKVVKNKVAPPFREVQFDIMYGEGISRMNELLILAEANGFIKKSGAWFSYDGTKIGQGKNN
AVKWLKENPEIADKLEQEIRNTLASNPNSVLKATASDSNDESDVEEFSEEEL
Nucleotide
Download Length: 1119 bp
>NTDB_id=863477 WAE38_RS09135 WP_021112712.1 1819603..1820721(+) (recA) [Glaesserella parasuis strain H16SD2BY4]
ATGGCTGAGAATAAGAAATCTTCAAAAAACAATACCGTCGTTAAACAAGTTGAACCAGAACAGAAAAAACAGGCATTGGA
AGCGGCACTTGCTCAAATTGAAAAACAATTTGGTAAAGGCTCTATTATGAAATTGGGGCAGACTGAACAATTAGATATTG
AGTCTGTTTCAACGGGATCATTAGGACTAGACCTTGCTCTTGGTATTGGTGGCTTGCCAATGGGACGTATTGTTGAAATC
TATGGGCCAGAATCATCAGGTAAAACAACCTTAACACTTTCTTTAATTGCCCAAGCTCAAAAAGGCAATAAAACCTGTGC
ATTTATTGATGCGGAACACGCATTAGATCCCGTCTATGCTCGCAATTTAGGGGTAAATACCGATGAATTACTAATTTCTC
AGCCAGATAACGGCGAACAAGCTCTTGAAATCTGTGATGCGTTAGTGCGTTCAGGGGCAGTTGATGTCATTATTGTGGAC
TCTGTCGCTGCACTCACGCCAAAAGCTGAAATTGAAGGGGATATGGGTGACTCGCATATGGGCTTACAAGCACGTTTAAT
GTCACAAGCGTTGCGTAAACTTACTGCGAACATCAAAAATACCAACTGTTTAGTTGTATTTATCAACCAAATCCGTATGA
AAATTGGTGTAATGTTTGGTAATCCAGAAACCACCACAGGCGGTAATGCACTGAAATTCTATGCCTCTGTTCGTTTAGAT
ATTCGTCGTTGTGGTGTAGTCAAAGATGGCGATGAAATTATTGGTAGTGAAACAAAAGTAAAAGTAGTAAAAAACAAAGT
TGCACCGCCATTCCGTGAAGTACAATTTGATATTATGTACGGCGAAGGGATTTCTCGTATGAATGAGCTACTGATTTTAG
CTGAAGCAAATGGCTTTATTAAGAAATCAGGTGCTTGGTTCTCTTACGACGGAACGAAAATTGGACAAGGTAAAAATAAT
GCAGTGAAATGGTTAAAAGAGAACCCTGAAATTGCAGATAAACTTGAACAAGAGATCCGAAATACATTGGCGTCAAACCC
AAATAGCGTATTAAAAGCGACGGCAAGCGACAGCAATGATGAAAGCGATGTCGAAGAGTTTAGCGAAGAAGAACTATAA
ATGGCTGAGAATAAGAAATCTTCAAAAAACAATACCGTCGTTAAACAAGTTGAACCAGAACAGAAAAAACAGGCATTGGA
AGCGGCACTTGCTCAAATTGAAAAACAATTTGGTAAAGGCTCTATTATGAAATTGGGGCAGACTGAACAATTAGATATTG
AGTCTGTTTCAACGGGATCATTAGGACTAGACCTTGCTCTTGGTATTGGTGGCTTGCCAATGGGACGTATTGTTGAAATC
TATGGGCCAGAATCATCAGGTAAAACAACCTTAACACTTTCTTTAATTGCCCAAGCTCAAAAAGGCAATAAAACCTGTGC
ATTTATTGATGCGGAACACGCATTAGATCCCGTCTATGCTCGCAATTTAGGGGTAAATACCGATGAATTACTAATTTCTC
AGCCAGATAACGGCGAACAAGCTCTTGAAATCTGTGATGCGTTAGTGCGTTCAGGGGCAGTTGATGTCATTATTGTGGAC
TCTGTCGCTGCACTCACGCCAAAAGCTGAAATTGAAGGGGATATGGGTGACTCGCATATGGGCTTACAAGCACGTTTAAT
GTCACAAGCGTTGCGTAAACTTACTGCGAACATCAAAAATACCAACTGTTTAGTTGTATTTATCAACCAAATCCGTATGA
AAATTGGTGTAATGTTTGGTAATCCAGAAACCACCACAGGCGGTAATGCACTGAAATTCTATGCCTCTGTTCGTTTAGAT
ATTCGTCGTTGTGGTGTAGTCAAAGATGGCGATGAAATTATTGGTAGTGAAACAAAAGTAAAAGTAGTAAAAAACAAAGT
TGCACCGCCATTCCGTGAAGTACAATTTGATATTATGTACGGCGAAGGGATTTCTCGTATGAATGAGCTACTGATTTTAG
CTGAAGCAAATGGCTTTATTAAGAAATCAGGTGCTTGGTTCTCTTACGACGGAACGAAAATTGGACAAGGTAAAAATAAT
GCAGTGAAATGGTTAAAAGAGAACCCTGAAATTGCAGATAAACTTGAACAAGAGATCCGAAATACATTGGCGTCAAACCC
AAATAGCGTATTAAAAGCGACGGCAAGCGACAGCAATGATGAAAGCGATGTCGAAGAGTTTAGCGAAGAAGAACTATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.