Detailed information NTG0860792

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: K9C72_RS10090
• Genome accession: NZ_CP130627
• Coordinates: 2135807..2136508 (-)
• Length: 233 a.a.
• NCBI ID: WP_000594579.1
• Uniprot ID: A0A0D5YJA0
• Organism: Acinetobacter baumannii strain MRSN571146
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2130807..2141508

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
K9C72_RS10060 (K9C72_02730)	-	2131114..2131557 (-)	444	WP_001246675.1	SRPBCC family protein	-
K9C72_RS10065 (K9C72_02735)	tadA	2131627..2132130 (-)	504	WP_001997771.1	tRNA adenosine(34) deaminase TadA	-
K9C72_RS10070 (K9C72_02740)	-	2132137..2133261 (-)	1125	WP_003114973.1	enoyl-CoA hydratase/isomerase family protein	-
K9C72_RS10075 (K9C72_02745)	ung	2133258..2133971 (-)	714	WP_001177527.1	uracil-DNA glycosylase	-
K9C72_RS10080 (K9C72_02750)	-	2134022..2134618 (-)	597	WP_000908449.1	6-carboxytetrahydropterin synthase	-
K9C72_RS10085 (K9C72_02755)	gspK	2134848..2135807 (-)	960	WP_000301478.1	type II secretion system minor pseudopilin GspK	-
K9C72_RS10090 (K9C72_02760)	xcpW	2135807..2136508 (-)	702	WP_000594579.1	type II secretion system minor pseudopilin GspJ	Machinery gene
K9C72_RS10095 (K9C72_02765)	xcpV	2136508..2136888 (-)	381	WP_000836914.1	type II secretion system minor pseudopilin GspI	Machinery gene
K9C72_RS10100 (K9C72_02770)	-	2136878..2137432 (-)	555	WP_000841373.1	type II secretion system protein	-
K9C72_RS10105 (K9C72_02775)	-	2137442..2138050 (-)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
K9C72_RS10110 (K9C72_02780)	-	2138088..2138861 (-)	774	WP_000497300.1	TatD family hydrolase	-
K9C72_RS10115 (K9C72_02785)	-	2138879..2139220 (-)	342	WP_001183027.1	PilZ domain-containing protein	-
K9C72_RS10120 (K9C72_02790)	-	2139232..2140212 (-)	981	WP_001075416.1	DNA polymerase III subunit delta'	-
K9C72_RS10125 (K9C72_02795)	kdsB	2140224..2140985 (-)	762	WP_000680692.1	3-deoxy-manno-octulosonate cytidylyltransferase	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26707.66 Da
• Isoelectric Point: 9.5501

>NTDB_id=860792 K9C72_RS10090 WP_000594579.1 2135807..2136508(-) (xcpW) [Acinetobacter baumannii strain MRSN571146]
MIKNKYIHIRSFSSRLAARSSSARLTRVSGFTLVELLVAIAIFAVLSLLGWKIFDYLFKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=860792 K9C72_RS10090 WP_000594579.1 2135807..2136508(-) (xcpW) [Acinetobacter baumannii strain MRSN571146]
ATGATAAAAAATAAATATATTCACATCCGAAGCTTTTCTTCTCGTCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGTCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGTTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCAAACCAAGGTGGTCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTTTACGTTTTAGCAAAGCGGGCGTAACGGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGACCAAAAAAAATTATATCGTCTTAAATATACAAATTTGAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAGTGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCGCAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

3D structure

• AlphaFold DB: A0A0D5YJA0

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	98.283	100	0.983