Detailed information    

insolico Bioinformatically predicted

Overview

Name   sepM   Type   Regulator
Locus tag   QZN16_RS02970 Genome accession   NZ_CP129876
Coordinates   523537..524610 (+) Length   357 a.a.
NCBI ID   WP_000790651.1    Uniprot ID   A0AAW6XPT9
Organism   Streptococcus agalactiae strain NEM316     
Function   processing of CSP (predicted from homology)   
Competence regulation

Genomic Context

Location: 518537..529610
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QZN16_RS02940 - 519428..520492 (+) 1065 WP_000021293.1 MmcQ/YjbR family DNA-binding protein -
  QZN16_RS02945 asnA 520607..521599 (+) 993 WP_000748015.1 aspartate--ammonia ligase -
  QZN16_RS02950 - 521644..522093 (-) 450 WP_000592261.1 hypothetical protein -
  QZN16_RS02955 rsmD 522224..522763 (+) 540 WP_001266830.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD -
  QZN16_RS02960 - 522775..523065 (+) 291 WP_000384889.1 hypothetical protein -
  QZN16_RS02965 coaD 523062..523547 (+) 486 WP_000161894.1 pantetheine-phosphate adenylyltransferase -
  QZN16_RS02970 sepM 523537..524610 (+) 1074 WP_000790651.1 SepM family pheromone-processing serine protease Regulator
  QZN16_RS02975 - 524685..526019 (+) 1335 WP_000137518.1 metallophosphoesterase -
  QZN16_RS02980 - 526088..526666 (+) 579 WP_001224500.1 YutD-like domain-containing protein -
  QZN16_RS02985 rlmN 526717..527823 (+) 1107 WP_000039435.1 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN -
  QZN16_RS02990 - 527823..528338 (+) 516 WP_000919807.1 VanZ family protein -

Sequence

Protein


Download         Length: 357 a.a.        Molecular weight: 39131.31 Da        Isoelectric Point: 10.4286

>NTDB_id=856037 QZN16_RS02970 WP_000790651.1 523537..524610(+) (sepM) [Streptococcus agalactiae strain NEM316]
MKNKDPKRKHKSLLGLLKWWIIGFAFLLLVLASLVVRLPYYLEMPGGAYDIRSVLKVNKKADKAKGSYNFVAVSVSQATP
AQVLYAWLTPFTELSSKEETTGGFSNDDYLRINQFYMETSQNESVYQALKLANKQVSLTYKGVYVLNLAKNSTFKDRLHL
ADTVTGVNGKSFKNSSQLIKYVAALHLGDKVKVQYTSQGKKKESVGKVIKLSNGKNGIGIGLTDHTEVSSDVPVDFNTEG
VGGPSAGLMFTLAIYDQLVKEDLRKGRKIAGTGTIEQNGHVGDIGGAGLKVVSAAKKGMDIFFVPNNPIDKNAKKGKTKV
QTNYQEAKAAAKRLGTKMKIVPVQNVQQAIDYLKKTK

Nucleotide


Download         Length: 1074 bp        

>NTDB_id=856037 QZN16_RS02970 WP_000790651.1 523537..524610(+) (sepM) [Streptococcus agalactiae strain NEM316]
GTGAAGAATAAAGATCCAAAAAGAAAACATAAAAGTTTACTAGGTCTGCTTAAATGGTGGATTATAGGTTTTGCTTTTTT
ATTGTTAGTATTAGCAAGCCTTGTGGTGAGGCTACCTTATTATTTGGAAATGCCAGGTGGAGCTTATGATATCCGTTCGG
TATTGAAAGTGAATAAAAAGGCTGATAAAGCTAAGGGTTCGTACAATTTTGTAGCGGTTTCTGTCAGTCAAGCAACGCCA
GCTCAGGTTCTTTATGCTTGGTTAACTCCTTTTACAGAATTATCTAGTAAAGAGGAGACAACAGGTGGCTTTAGTAATGA
CGATTATCTCAGAATTAATCAATTCTACATGGAGACTTCTCAAAATGAGTCCGTCTATCAAGCTTTAAAGTTAGCTAATA
AGCAAGTATCTCTTACTTATAAAGGAGTTTATGTGCTTAACTTAGCTAAAAATTCGACATTTAAAGATAGATTACATTTA
GCTGATACAGTCACAGGAGTTAATGGCAAAAGTTTCAAAAATTCTTCTCAACTTATCAAATATGTTGCAGCTCTTCATCT
AGGTGATAAAGTAAAGGTACAATACACAAGTCAAGGTAAAAAGAAAGAATCGGTTGGTAAAGTTATTAAACTATCAAACG
GTAAAAATGGTATTGGTATCGGTTTGACAGACCATACAGAAGTATCATCTGATGTTCCTGTGGACTTTAATACTGAAGGT
GTTGGAGGACCAAGTGCAGGTTTAATGTTTACTTTAGCGATTTACGACCAATTGGTTAAAGAAGATTTACGTAAAGGACG
TAAGATTGCAGGTACTGGTACTATTGAGCAAAATGGGCATGTTGGCGATATTGGTGGAGCAGGTTTGAAAGTTGTTTCAG
CGGCTAAAAAAGGAATGGATATTTTCTTTGTTCCTAATAATCCGATCGATAAAAATGCTAAAAAAGGCAAAACAAAGGTT
CAGACGAATTATCAAGAGGCAAAAGCAGCAGCTAAGCGATTAGGTACGAAGATGAAAATTGTACCAGTTCAAAATGTTCA
GCAAGCTATTGATTATTTGAAAAAAACAAAATAA

Domains

Predicted by InterproScan.

PDZ domain (PDZ_2)

(137-203)

Lon protease (S16) C-terminal proteolytic domain (Lon_C)

(241-307)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sepM Streptococcus mutans UA159

69.027

94.958

0.655