Detailed information
Bioinformatically predicted
Overview
| Name | recA | Type | Machinery gene |
| Locus tag | V1209_RS06100 | Genome accession | NZ_CP143255 |
| Coordinates | 1363880..1365010 (-) | Length | 376 a.a. |
| NCBI ID | WP_005598042.1 | Uniprot ID | A0ABM6X324 |
| Organism | Actinobacillus pleuropneumoniae strain ZJNH2023 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 1358880..1370010
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| V1209_RS06050 (V1209_06040) | - | 1360206..1360457 (-) | 252 | WP_005601617.1 | accessory factor UbiK family protein | - |
| V1209_RS06075 (V1209_06065) | aroE | 1361145..1361969 (-) | 825 | WP_005601621.1 | shikimate dehydrogenase | - |
| V1209_RS06080 (V1209_06070) | - | 1361976..1362530 (-) | 555 | WP_005601623.1 | Sua5/YciO/YrdC/YwlC family protein | - |
| V1209_RS06085 (V1209_06075) | - | 1362523..1363056 (-) | 534 | WP_042655096.1 | topoisomerase DNA-binding C4 zinc finger domain-containing protein | - |
| V1209_RS06090 (V1209_06080) | yqfB | 1363053..1363361 (-) | 309 | WP_005608348.1 | N(4)-acetylcytidine aminohydrolase | - |
| V1209_RS06095 (V1209_06085) | recX | 1363354..1363809 (-) | 456 | WP_005601625.1 | recombination regulator RecX | - |
| V1209_RS06100 (V1209_06090) | recA | 1363880..1365010 (-) | 1131 | WP_005598042.1 | recombinase RecA | Machinery gene |
| V1209_RS06105 (V1209_06095) | - | 1365124..1365729 (-) | 606 | WP_042655097.1 | aminotransferase class IV family protein | - |
| V1209_RS06110 (V1209_06100) | - | 1365707..1366675 (-) | 969 | WP_009874769.1 | aminodeoxychorismate synthase component I | - |
| V1209_RS06115 (V1209_06105) | rmuC | 1366810..1368444 (+) | 1635 | WP_009874770.1 | DNA recombination protein RmuC | - |
| V1209_RS06120 (V1209_06110) | - | 1368416..1369012 (+) | 597 | WP_005608357.1 | anthranilate synthase component II | - |
| V1209_RS06125 (V1209_06115) | - | 1369117..1369566 (+) | 450 | WP_005608359.1 | DUF302 domain-containing protein | - |
Sequence
Protein
Download Length: 376 a.a. Molecular weight: 40544.17 Da Isoelectric Point: 4.5846
>NTDB_id=843311 V1209_RS06100 WP_005598042.1 1363880..1365010(-) (recA) [Actinobacillus pleuropneumoniae strain ZJNH2023]
MAADNKKAQKNTVTKQIDPEQKEKALAAALAQIEKQFGKGSIMRLGDTQALDIEAVSTGSIGLDAALGIGGLPMGRIVEI
YGPESSGKTTLTLSVIAQAQKSGKTCAFIDAEHALDPVYARKLGVDTDALLISQPDNGEQALEICDALVRSGAVDVIIVD
SVAALTPKAEIEGDMGDSHMGLQARLMSQALRKLTANIKATNCLVVFINQIRMKIGVMFGNPETTTGGNALKFYASVRLD
IRRSGVVKDGDEVVGSETKVKIVKNKVAPPFREVQFDIMYGEGISRMNELLILAEANGFIQKAGAWFSYEGTKIGQGKNN
AIKWLKENPEIAEKIEQDIREQLISTPEKTSAGEQNVLDADDVNDFEDEAFNEEEL
MAADNKKAQKNTVTKQIDPEQKEKALAAALAQIEKQFGKGSIMRLGDTQALDIEAVSTGSIGLDAALGIGGLPMGRIVEI
YGPESSGKTTLTLSVIAQAQKSGKTCAFIDAEHALDPVYARKLGVDTDALLISQPDNGEQALEICDALVRSGAVDVIIVD
SVAALTPKAEIEGDMGDSHMGLQARLMSQALRKLTANIKATNCLVVFINQIRMKIGVMFGNPETTTGGNALKFYASVRLD
IRRSGVVKDGDEVVGSETKVKIVKNKVAPPFREVQFDIMYGEGISRMNELLILAEANGFIQKAGAWFSYEGTKIGQGKNN
AIKWLKENPEIAEKIEQDIREQLISTPEKTSAGEQNVLDADDVNDFEDEAFNEEEL
Nucleotide
Download Length: 1131 bp
>NTDB_id=843311 V1209_RS06100 WP_005598042.1 1363880..1365010(-) (recA) [Actinobacillus pleuropneumoniae strain ZJNH2023]
ATGGCAGCGGATAACAAAAAAGCGCAAAAGAACACAGTAACAAAACAAATCGATCCGGAACAAAAAGAAAAAGCATTAGC
TGCTGCTCTTGCCCAAATTGAAAAACAATTTGGTAAAGGTTCTATTATGCGCTTAGGCGACACGCAAGCGCTTGATATTG
AAGCGGTTTCAACCGGTTCAATCGGTTTAGACGCCGCATTAGGTATCGGTGGCTTACCGATGGGACGTATCGTTGAGATC
TATGGGCCGGAATCTTCAGGTAAAACGACGCTGACTTTATCGGTCATTGCGCAAGCACAAAAATCAGGTAAAACTTGTGC
GTTTATTGATGCGGAACACGCGCTTGATCCGGTTTATGCACGTAAATTAGGCGTGGATACCGATGCATTGTTAATTTCAC
AACCGGATAACGGTGAACAAGCGCTCGAGATTTGTGATGCGTTGGTTCGTTCCGGTGCGGTTGATGTAATTATTGTGGAC
TCGGTTGCTGCATTAACGCCGAAAGCGGAAATTGAAGGCGATATGGGCGATTCTCATATGGGCTTACAAGCACGTTTAAT
GTCACAAGCGTTACGTAAATTAACGGCAAACATTAAGGCGACTAACTGCTTAGTGGTGTTTATCAACCAAATTCGTATGA
AGATCGGTGTGATGTTCGGTAACCCTGAAACAACAACCGGCGGTAACGCACTTAAATTCTACGCTTCGGTTCGTTTAGAT
ATTCGTCGTTCAGGTGTAGTAAAAGACGGAGATGAAGTGGTCGGTAGCGAAACGAAAGTGAAAATTGTGAAAAATAAAGT
TGCGCCGCCGTTCCGTGAAGTTCAATTCGACATTATGTATGGTGAAGGTATTTCACGTATGAATGAACTATTAATTCTTG
CCGAAGCGAATGGCTTTATCCAAAAAGCGGGTGCATGGTTCTCATACGAAGGTACGAAAATCGGTCAAGGTAAAAATAAT
GCAATTAAATGGTTAAAAGAAAATCCGGAGATTGCAGAGAAAATTGAACAAGATATTCGTGAGCAACTTATTTCAACACC
GGAAAAAACATCGGCAGGTGAACAAAATGTGCTAGATGCCGATGATGTGAATGACTTTGAAGACGAAGCGTTTAACGAAG
AAGAACTATAA
ATGGCAGCGGATAACAAAAAAGCGCAAAAGAACACAGTAACAAAACAAATCGATCCGGAACAAAAAGAAAAAGCATTAGC
TGCTGCTCTTGCCCAAATTGAAAAACAATTTGGTAAAGGTTCTATTATGCGCTTAGGCGACACGCAAGCGCTTGATATTG
AAGCGGTTTCAACCGGTTCAATCGGTTTAGACGCCGCATTAGGTATCGGTGGCTTACCGATGGGACGTATCGTTGAGATC
TATGGGCCGGAATCTTCAGGTAAAACGACGCTGACTTTATCGGTCATTGCGCAAGCACAAAAATCAGGTAAAACTTGTGC
GTTTATTGATGCGGAACACGCGCTTGATCCGGTTTATGCACGTAAATTAGGCGTGGATACCGATGCATTGTTAATTTCAC
AACCGGATAACGGTGAACAAGCGCTCGAGATTTGTGATGCGTTGGTTCGTTCCGGTGCGGTTGATGTAATTATTGTGGAC
TCGGTTGCTGCATTAACGCCGAAAGCGGAAATTGAAGGCGATATGGGCGATTCTCATATGGGCTTACAAGCACGTTTAAT
GTCACAAGCGTTACGTAAATTAACGGCAAACATTAAGGCGACTAACTGCTTAGTGGTGTTTATCAACCAAATTCGTATGA
AGATCGGTGTGATGTTCGGTAACCCTGAAACAACAACCGGCGGTAACGCACTTAAATTCTACGCTTCGGTTCGTTTAGAT
ATTCGTCGTTCAGGTGTAGTAAAAGACGGAGATGAAGTGGTCGGTAGCGAAACGAAAGTGAAAATTGTGAAAAATAAAGT
TGCGCCGCCGTTCCGTGAAGTTCAATTCGACATTATGTATGGTGAAGGTATTTCACGTATGAATGAACTATTAATTCTTG
CCGAAGCGAATGGCTTTATCCAAAAAGCGGGTGCATGGTTCTCATACGAAGGTACGAAAATCGGTCAAGGTAAAAATAAT
GCAATTAAATGGTTAAAAGAAAATCCGGAGATTGCAGAGAAAATTGAACAAGATATTCGTGAGCAACTTATTTCAACACC
GGAAAAAACATCGGCAGGTGAACAAAATGTGCTAGATGCCGATGATGTGAATGACTTTGAAGACGAAGCGTTTAACGAAG
AAGAACTATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.