NTDB

Overview

Name	recA	Type	Machinery gene
Locus tag	RIU97_RS11370	Genome accession	NZ_CP134201
Coordinates	2626240..2627349 (-)	Length	369 a.a.
NCBI ID	WP_404955824.1	Uniprot ID	-
Organism	Streptomyces sp. 147326
Function	homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2621240..2632349

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RIU97_RS11340 (RIU97_11310)	-	2621685..2623259 (+)	1575	WP_404955815.1	FAD-dependent monooxygenase	-
RIU97_RS11345	-	2623292..2623378 (+)	87	WP_311318651.1	putative leader peptide	-
RIU97_RS11350 (RIU97_11315)	-	2623457..2624005 (+)	549	WP_404955817.1	cysteine dioxygenase	-
RIU97_RS11355 (RIU97_11320)	-	2624002..2624391 (+)	390	WP_404955820.1	rhodanese-like domain-containing protein	-
RIU97_RS11360 (RIU97_11325)	-	2624581..2625480 (-)	900	Protein_2262	ABC transporter permease	-
RIU97_RS11365 (RIU97_11330)	recX	2625670..2626236 (-)	567	WP_404955822.1	recombination regulator RecX	-
RIU97_RS11370 (RIU97_11335)	recA	2626240..2627349 (-)	1110	WP_404955824.1	recombinase RecA	Machinery gene
RIU97_RS11375 (RIU97_11340)	-	2627533..2627925 (-)	393	WP_404955826.1	hypothetical protein	-
RIU97_RS11380 (RIU97_11345)	-	2628007..2628459 (-)	453	WP_404955828.1	iron chaperone	-
RIU97_RS11385 (RIU97_11350)	-	2628648..2629106 (-)	459	WP_404955831.1	hypothetical protein	-
RIU97_RS11390 (RIU97_11355)	-	2629268..2630026 (+)	759	WP_404955833.1	Clp protease N-terminal domain-containing protein	-
RIU97_RS11395 (RIU97_11360)	-	2629977..2631095 (-)	1119	WP_404962813.1	AI-2E family transporter	-
RIU97_RS11400 (RIU97_11365)	-	2631380..2631574 (-)	195	WP_404955835.1	DUF3046 domain-containing protein	-

Sequence

Protein

Download Length: 369 a.a. Molecular weight: 38965.36 Da Isoelectric Point: 6.5224

                                >NTDB_id=802463 RIU97_RS11370 WP_404955824.1 2626240..2627349(-) (recA) [Streptomyces sp. 147326]

MAGTDREKALDAALAQIERQFGKGAVMRLGDKPNDPIEVIPTGSTALDIALGVGGLPRGRVIEVYGPESSGKTTLTLHAV

ANAQKAGGTVAFVDAEHALDPEYAKALGVDTDNLILSQPDTGEQALEIVDMLVRSGALDLIVIDSVAALVPRAEIEGEMG

DSHVGLQARLMSQALRKITGALNQSKTTAIFINQLREKIGVMFGSPETTTGGRALKFYASVRLDIRRIETLKDGTDAVGN

RTRVKVVKNKVAPPFKQAEFDILYGQGISREGGLIDMGVEHGFVRKAGAWYTYEGDQLGQGKENARNFLKDNPDLANEIE

RKIKEKLGVGVRKDAAADDAAAAAPADATAVPAPASKAKTTAKAAVAKS

Nucleotide

Download Length: 1110 bp

                                >NTDB_id=802463 RIU97_RS11370 WP_404955824.1 2626240..2627349(-) (recA) [Streptomyces sp. 147326]

ATGGCAGGCACCGACCGCGAGAAGGCTCTCGACGCCGCTCTCGCACAGATTGAACGGCAATTCGGCAAGGGTGCGGTCAT

GCGCCTCGGCGACAAGCCGAACGACCCCATCGAGGTCATCCCCACCGGGTCGACCGCGCTGGACATCGCGCTCGGCGTCG

GCGGGCTGCCCCGCGGCCGCGTGATCGAGGTGTACGGGCCGGAGTCCTCCGGTAAGACGACCCTGACCCTGCACGCCGTG

GCCAACGCGCAGAAGGCCGGCGGCACCGTCGCCTTCGTGGACGCCGAGCACGCGCTCGACCCCGAGTACGCGAAGGCCCT

CGGCGTGGACACCGACAACCTCATCCTGTCGCAGCCGGACACCGGCGAGCAGGCGCTGGAGATCGTGGACATGCTCGTCC

GCTCCGGTGCCCTCGACCTGATCGTCATCGACTCCGTGGCGGCCCTCGTGCCGCGCGCGGAGATCGAGGGTGAGATGGGC

GACTCTCACGTCGGTCTCCAGGCCCGTCTGATGAGCCAGGCGCTCCGGAAGATCACCGGTGCGCTCAACCAGTCCAAGAC

CACCGCGATCTTCATCAACCAGCTCCGCGAGAAGATCGGTGTGATGTTCGGCTCGCCGGAGACCACCACCGGTGGCCGCG

CGCTGAAGTTCTACGCCTCCGTACGCCTCGACATCCGCCGCATCGAGACCCTGAAGGACGGCACGGACGCGGTCGGTAAC

CGCACCCGCGTCAAGGTGGTCAAGAACAAGGTCGCGCCCCCGTTCAAGCAGGCCGAGTTCGACATCCTCTACGGCCAGGG

CATCAGCCGCGAGGGCGGACTGATCGACATGGGCGTGGAGCACGGCTTCGTGCGCAAGGCCGGTGCCTGGTACACGTACG

AGGGCGACCAGCTCGGCCAGGGCAAGGAGAACGCCCGTAACTTCCTGAAGGACAACCCGGACCTCGCCAACGAGATCGAG

CGGAAGATCAAGGAGAAGCTGGGCGTGGGTGTCCGCAAGGACGCCGCCGCCGATGACGCCGCCGCTGCCGCGCCCGCCGA

CGCCACGGCCGTGCCCGCGCCCGCGTCGAAGGCCAAGACGACGGCCAAGGCCGCCGTGGCCAAGAGCTGA

Domains

Predicted by InterProScan.

recA bacterial DNA recombination protein (RecA_N)

(8-269)

Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.

3D structure

Source	ID	Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.

Visualization of predicted probability:

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	H_a-value
recA	Acinetobacter baylyi ADP1	65.103	92.412	0.602
recA	Pseudomonas stutzeri DSM 10701	68.731	87.534	0.602
recA	Vibrio cholerae O1 biovar El Tor strain E7946	63.506	94.309	0.599
recA	Vibrio cholerae strain A1552	63.506	94.309	0.599
recA	Staphylococcus aureus strain ATCC 12600	67.791	88.347	0.599
recA	Neisseria gonorrhoeae strain FA1090	67.485	88.347	0.596
recA	Neisseria gonorrhoeae MS11	67.485	88.347	0.596
recA	Acinetobacter baumannii D1279779	68.111	87.534	0.596
recA	Acinetobacter nosocomialis M2	67.802	87.534	0.593
recA	Bacillus subtilis subsp. subtilis str. 168	67.178	88.347	0.593
recA	Ralstonia pseudosolanacearum GMI1000	69.329	84.824	0.588
recA	Latilactobacillus sakei subsp. sakei 23K	64.742	89.16	0.577
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	63.095	91.057	0.575
recA	Helicobacter pylori 26695	64.615	88.076	0.569
recA	Helicobacter pylori strain NCTC11637	64.615	88.076	0.569
recA	Streptococcus pyogenes NZ131	63.03	89.431	0.564
recA	Streptococcus mutans UA159	61.934	89.702	0.556
recA	Streptococcus thermophilus LMG 18311	61.934	89.702	0.556
recA	Streptococcus thermophilus LMD-9	61.934	89.702	0.556
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	62.006	89.16	0.553
recA	Streptococcus mitis NCTC 12261	61.631	89.702	0.553
recA	Streptococcus mitis SK321	61.631	89.702	0.553
recA	Lactococcus lactis subsp. cremoris KW2	61.631	89.702	0.553
recA	Glaesserella parasuis strain SC1401	63.043	87.263	0.55
recA	Streptococcus pneumoniae D39	61.027	89.702	0.547
recA	Streptococcus pneumoniae R36A	61.027	89.702	0.547
recA	Streptococcus pneumoniae Rx1	61.027	89.702	0.547
recA	Streptococcus pneumoniae R6	61.027	89.702	0.547
recA	Streptococcus pneumoniae TIGR4	61.027	89.702	0.547
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	59.688	86.721	0.518

Detailed information NTG0802463