Detailed information NTG0796902

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: PYW33_RS01210
• Genome accession: NZ_CP118963
• Coordinates: 290520..291944 (-)
• Length: 474 a.a.
• NCBI ID: WP_004644917.1
• Uniprot ID: N8Q709
• Organism: Acinetobacter lwoffii strain DSM 2403
• Function: regulation of type IV pilus assembly (predicted from homology) Competence regulation

Genomic Context

Location: 285520..296944

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PYW33_RS01195	lptG	286573..287643 (+)	1071	WP_004281054.1	LPS export ABC transporter permease LptG	-
PYW33_RS01200	gpmI	287768..289315 (+)	1548	WP_004644915.1	2,3-bisphosphoglycerate-independent phosphoglycerate mutase	-
PYW33_RS01205	-	289347..290519 (+)	1173	WP_004644916.1	S41 family peptidase	-
PYW33_RS01210	pilR	290520..291944 (-)	1425	WP_004644917.1	sigma-54-dependent transcriptional regulator	Regulator
PYW33_RS01215	pilS	291959..293524 (-)	1566	WP_004644918.1	sensor histidine kinase	Regulator
PYW33_RS01220	-	293547..294182 (-)	636	WP_004281059.1	response regulator transcription factor GacA	-
PYW33_RS01225	-	294402..295463 (+)	1062	WP_004281060.1	serine hydrolase	-
PYW33_RS01230	thrC	295521..296660 (-)	1140	WP_004281061.1	threonine synthase	-

Sequence

Protein

• Length: 474 a.a.
• Molecular weight: 53537.67 Da
• Isoelectric Point: 6.0366

>NTDB_id=796902 PYW33_RS01210 WP_004644917.1 290520..291944(-) (pilR) [Acinetobacter lwoffii strain DSM 2403]
MNGEQQPLVLLVDDEEDLCTLMQMSLLRMGIRTHIAHRLEDAKKCLANHQYDACLTDLNLPDGNGLELLDWISNLYPALP
VAVLTAYGNMEIAIAALKAGAFDFVSKPINQKHLEQLLQKALNKPVDYSHNNPNDALEHKMLIGQSMPIQQLRITLQKIA
RSQAPVFITGESGTGKEVVANLVHRLSNRNEGPFIAINCGAIPTELMESELFGHKKGSFTGAAQDKQGLIQSAHGGSLFL
DEIAELPLSMQVKLLRAVQEKRIRPLGSDTEIDVDFRVISATHQDLEALVQQGKFRQDLYFRIHVMDLTLPPLRERGQDI
LLLAEHFIQKICQEWGIPNKKPTERSKEFLLGQYYPGNVRELRNIMERAITLSDEERIDLQHLQSAPLRQALNSPQEMNT
LTSEIIATETLIAPKKLPEEGLELYLEKVEKEILLNALNLTHWNRTLAAKKLGMSFRSLRYRLKKFGLDTEEDE

Nucleotide

• Length: 1425 bp

>NTDB_id=796902 PYW33_RS01210 WP_004644917.1 290520..291944(-) (pilR) [Acinetobacter lwoffii strain DSM 2403]
ATGAATGGGGAACAACAACCACTGGTGCTCTTGGTGGATGATGAGGAGGATTTATGTACCCTCATGCAAATGTCATTGCT
GCGCATGGGAATTCGCACGCACATTGCCCATCGTTTGGAAGACGCTAAAAAATGCCTTGCCAATCATCAATATGATGCCT
GTCTGACCGACCTGAATCTGCCCGATGGCAATGGTTTGGAGCTTCTGGACTGGATTAGCAACCTCTATCCGGCACTTCCG
GTCGCGGTTCTGACCGCCTATGGCAACATGGAAATCGCCATTGCCGCGCTCAAAGCCGGGGCCTTTGACTTTGTCAGTAA
ACCGATTAATCAGAAACATCTGGAACAGCTCTTACAAAAAGCCCTGAATAAACCGGTGGATTATTCGCATAATAATCCGA
ATGATGCACTCGAACATAAAATGCTGATTGGACAATCCATGCCAATTCAGCAATTACGCATTACCTTACAAAAAATTGCC
CGCTCACAAGCACCGGTTTTTATCACAGGTGAATCAGGTACAGGTAAAGAAGTCGTGGCCAATCTGGTCCATCGCTTGAG
TAACCGCAATGAAGGTCCTTTTATTGCGATTAATTGTGGTGCCATTCCGACTGAATTGATGGAAAGCGAACTGTTTGGAC
ATAAAAAAGGCAGCTTTACCGGCGCTGCTCAGGACAAACAGGGCCTGATTCAATCTGCACATGGTGGCAGTCTGTTTCTG
GATGAAATTGCAGAATTACCGCTTTCCATGCAGGTCAAACTGTTACGTGCCGTTCAGGAAAAACGTATTCGTCCACTCGG
TTCAGATACCGAAATTGATGTGGATTTCCGCGTGATCAGTGCTACCCATCAGGATCTGGAAGCCTTGGTGCAACAAGGCA
AATTCCGCCAGGATCTATATTTCCGTATTCATGTAATGGATCTGACTTTACCGCCGCTGCGTGAACGCGGTCAGGATATT
CTGTTATTGGCTGAACACTTTATTCAGAAAATTTGCCAGGAATGGGGCATTCCCAATAAAAAACCGACCGAACGCAGCAA
AGAGTTTTTATTGGGACAATATTATCCAGGTAATGTGCGTGAATTACGCAATATTATGGAACGTGCGATTACTTTAAGTG
ATGAAGAGCGGATTGATCTTCAGCATTTGCAGAGCGCACCGCTGCGTCAGGCGCTAAACAGCCCTCAGGAGATGAATACG
CTCACGAGCGAGATCATTGCCACCGAGACCCTGATTGCACCTAAAAAGCTGCCTGAAGAGGGTCTAGAGCTGTATTTGGA
AAAGGTCGAGAAAGAAATTTTACTCAATGCGCTGAATCTGACCCATTGGAACCGGACACTGGCCGCCAAAAAACTCGGCA
TGTCGTTCCGTTCCCTGCGCTATCGCTTGAAAAAGTTCGGACTGGATACCGAAGAAGACGAATAA

Domains

Predicted by InterproScan.

• Response regulator receiver domain (Response_reg) (9-118)

• Bacterial regulatory protein, Fis family (HTH_8) (426-466)

• Sigma-54 interaction domain (Sigma54_activat) (142-308)

3D structure

• AlphaFold DB: N8Q709

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Acinetobacter baumannii strain A118	74.051	100	0.741
pilR	Pseudomonas aeruginosa PAK	49.024	97.257	0.477