Detailed information
Bioinformatically predicted
Overview
| Name | recA | Type | Machinery gene |
| Locus tag | QAP04_RS06410 | Genome accession | NZ_CP130623 |
| Coordinates | 1342813..1343856 (-) | Length | 347 a.a. |
| NCBI ID | WP_000952098.1 | Uniprot ID | - |
| Organism | Helicobacter pylori strain BS04 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 1337813..1348856
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QAP04_RS06380 (QAP04_06360) | - | 1338069..1339172 (+) | 1104 | WP_373961180.1 | glycosyltransferase family 8 protein | - |
| QAP04_RS06385 (QAP04_06365) | - | 1339169..1340125 (-) | 957 | WP_304530387.1 | PDC sensor domain-containing protein | - |
| QAP04_RS06390 (QAP04_06370) | - | 1340147..1340635 (-) | 489 | WP_373961181.1 | shikimate kinase | - |
| QAP04_RS06395 (QAP04_06375) | - | 1340640..1341236 (-) | 597 | WP_373961812.1 | AMIN domain-containing protein | - |
| QAP04_RS06400 (QAP04_06380) | - | 1341253..1341528 (-) | 276 | WP_373961182.1 | hypothetical protein | - |
| QAP04_RS06405 (QAP04_06385) | eno | 1341521..1342801 (-) | 1281 | WP_373961183.1 | phosphopyruvate hydratase | - |
| QAP04_RS06410 (QAP04_06390) | recA | 1342813..1343856 (-) | 1044 | WP_000952098.1 | recombinase RecA | Machinery gene |
| QAP04_RS06415 (QAP04_06395) | - | 1343954..1344817 (+) | 864 | WP_373961184.1 | menaquinone biosynthesis family protein | - |
| QAP04_RS06420 (QAP04_06400) | - | 1344814..1345581 (-) | 768 | WP_373961185.1 | hypothetical protein | - |
| QAP04_RS06425 (QAP04_06405) | - | 1345670..1346251 (-) | 582 | WP_373961186.1 | hypothetical protein | - |
| QAP04_RS06430 (QAP04_06410) | - | 1346263..1346847 (-) | 585 | WP_373961187.1 | hypothetical protein | - |
| QAP04_RS06435 (QAP04_06415) | - | 1346948..1347154 (-) | 207 | WP_000670506.1 | DUF4006 family protein | - |
| QAP04_RS06440 (QAP04_06420) | ccoP | 1347165..1348043 (-) | 879 | WP_024113805.1 | cytochrome-c oxidase, cbb3-type subunit III | - |
| QAP04_RS06445 (QAP04_06425) | - | 1348045..1348263 (-) | 219 | WP_002203649.1 | cytochrome c oxidase, cbb3-type, CcoQ subunit | - |
Sequence
Protein
Download Length: 347 a.a. Molecular weight: 37653.40 Da Isoelectric Point: 5.7176
>NTDB_id=786028 QAP04_RS06410 WP_000952098.1 1342813..1343856(-) (recA) [Helicobacter pylori strain BS04]
MAIDEDKQKAISLAIKQIDKVFGKGALVRLGDKQVEKIDAISTGSLGLDLALGIGGVPKGRIIEIYGPESSGKTTLSLHI
IAECQKNGGVCAFIDAEHALDVHYAKRLGVDTENLLVSQPDTGEQALEILETITRSGGIDLVVVDSVAALTPKAEIDGDM
GDQHVGLQARLMSHALRKITGVLHKMNTTLIFINQIRMKIGMMGYGSPETTTGGNALKFYASVRIDIRRIAALKQNEQHI
GNRAKAKVVKNKVAPPFREAEFDIMFGEGISKEGEIIDYGVKLDIVDKSGAWLSYQDKKLGQGRENAKALLKEDKALANE
ITLKIKESIGSNEEIMPLPDEPLEEME
MAIDEDKQKAISLAIKQIDKVFGKGALVRLGDKQVEKIDAISTGSLGLDLALGIGGVPKGRIIEIYGPESSGKTTLSLHI
IAECQKNGGVCAFIDAEHALDVHYAKRLGVDTENLLVSQPDTGEQALEILETITRSGGIDLVVVDSVAALTPKAEIDGDM
GDQHVGLQARLMSHALRKITGVLHKMNTTLIFINQIRMKIGMMGYGSPETTTGGNALKFYASVRIDIRRIAALKQNEQHI
GNRAKAKVVKNKVAPPFREAEFDIMFGEGISKEGEIIDYGVKLDIVDKSGAWLSYQDKKLGQGRENAKALLKEDKALANE
ITLKIKESIGSNEEIMPLPDEPLEEME
Nucleotide
Download Length: 1044 bp
>NTDB_id=786028 QAP04_RS06410 WP_000952098.1 1342813..1343856(-) (recA) [Helicobacter pylori strain BS04]
ATGGCAATAGATGAAGACAAACAAAAAGCGATTTCTTTAGCGATCAAACAAATTGATAAGGTTTTTGGTAAGGGGGCGTT
GGTGCGCCTTGGGGACAAACAAGTAGAAAAGATTGACGCTATTTCTACAGGCTCGTTAGGGTTGGATCTGGCTTTAGGGA
TTGGGGGCGTTCCAAAGGGTAGGATCATTGAAATTTATGGGCCAGAGTCAAGCGGGAAGACCACTCTAAGCTTGCATATT
ATTGCAGAATGCCAAAAAAATGGGGGCGTGTGCGCGTTCATTGACGCTGAGCATGCCCTAGATGTGCATTACGCTAAGAG
ATTGGGCGTGGATACGGAAAATTTACTCGTTTCCCAACCTGATACAGGCGAGCAAGCTTTAGAGATTTTAGAAACGATCA
CCAGAAGCGGAGGGATTGATTTAGTGGTGGTGGATTCTGTAGCGGCTCTTACGCCTAAAGCGGAGATTGATGGGGATATG
GGCGATCAGCATGTGGGCTTGCAAGCAAGGCTTATGAGCCATGCGTTAAGAAAAATCACCGGTGTCTTGCACAAGATGAA
CACTACTCTCATTTTTATCAATCAAATCAGAATGAAGATTGGCATGATGGGTTATGGGAGTCCAGAGACCACAACCGGGG
GTAATGCCTTAAAATTCTATGCGAGCGTTAGGATTGATATTAGAAGGATTGCGGCTTTAAAACAGAACGAACAGCATATT
GGCAACAGGGCTAAAGCCAAAGTGGTTAAAAATAAAGTCGCTCCGCCTTTTAGAGAAGCGGAATTTGACATCATGTTTGG
GGAGGGGATTTCTAAAGAGGGCGAAATCATTGACTATGGCGTGAAATTAGACATTGTGGATAAGAGTGGGGCATGGCTTA
GCTACCAGGATAAAAAGCTAGGGCAAGGCCGAGAAAACGCTAAAGCCCTACTGAAAGAAGATAAAGCGCTAGCGAATGAA
ATCACTCTTAAGATTAAAGAGAGTATTGGCTCTAATGAAGAGATCATGCCCTTACCGGATGAGCCTTTAGAAGAAATGGA
ATAA
ATGGCAATAGATGAAGACAAACAAAAAGCGATTTCTTTAGCGATCAAACAAATTGATAAGGTTTTTGGTAAGGGGGCGTT
GGTGCGCCTTGGGGACAAACAAGTAGAAAAGATTGACGCTATTTCTACAGGCTCGTTAGGGTTGGATCTGGCTTTAGGGA
TTGGGGGCGTTCCAAAGGGTAGGATCATTGAAATTTATGGGCCAGAGTCAAGCGGGAAGACCACTCTAAGCTTGCATATT
ATTGCAGAATGCCAAAAAAATGGGGGCGTGTGCGCGTTCATTGACGCTGAGCATGCCCTAGATGTGCATTACGCTAAGAG
ATTGGGCGTGGATACGGAAAATTTACTCGTTTCCCAACCTGATACAGGCGAGCAAGCTTTAGAGATTTTAGAAACGATCA
CCAGAAGCGGAGGGATTGATTTAGTGGTGGTGGATTCTGTAGCGGCTCTTACGCCTAAAGCGGAGATTGATGGGGATATG
GGCGATCAGCATGTGGGCTTGCAAGCAAGGCTTATGAGCCATGCGTTAAGAAAAATCACCGGTGTCTTGCACAAGATGAA
CACTACTCTCATTTTTATCAATCAAATCAGAATGAAGATTGGCATGATGGGTTATGGGAGTCCAGAGACCACAACCGGGG
GTAATGCCTTAAAATTCTATGCGAGCGTTAGGATTGATATTAGAAGGATTGCGGCTTTAAAACAGAACGAACAGCATATT
GGCAACAGGGCTAAAGCCAAAGTGGTTAAAAATAAAGTCGCTCCGCCTTTTAGAGAAGCGGAATTTGACATCATGTTTGG
GGAGGGGATTTCTAAAGAGGGCGAAATCATTGACTATGGCGTGAAATTAGACATTGTGGATAAGAGTGGGGCATGGCTTA
GCTACCAGGATAAAAAGCTAGGGCAAGGCCGAGAAAACGCTAAAGCCCTACTGAAAGAAGATAAAGCGCTAGCGAATGAA
ATCACTCTTAAGATTAAAGAGAGTATTGGCTCTAATGAAGAGATCATGCCCTTACCGGATGAGCCTTTAGAAGAAATGGA
ATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.