Detailed information    

insolico Bioinformatically predicted

Overview


Name   braS   Type   Regulator
Locus tag   PQQ27_RS13115 Genome accession   NZ_CP117238
Coordinates   2618213..2619100 (-) Length   295 a.a.
NCBI ID   WP_000143425.1    Uniprot ID   A0A389PV50
Organism   Staphylococcus aureus strain ATCC 23235     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 2613213..2624100
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PQQ27_RS13085 (PQQ27_13085) - 2613232..2613324 (+) 93 WP_010956583.1 hypothetical protein -
  PQQ27_RS13090 (PQQ27_13090) - 2613432..2613929 (-) 498 WP_001065268.1 glutathione peroxidase -
  PQQ27_RS13095 (PQQ27_13095) - 2613939..2614199 (-) 261 WP_001791974.1 hypothetical protein -
  PQQ27_RS13100 (PQQ27_13100) - 2614581..2614694 (-) 114 Protein_2508 hypothetical protein -
  PQQ27_RS13105 (PQQ27_13105) - 2615353..2617353 (-) 2001 WP_000776749.1 ABC transporter permease -
  PQQ27_RS13110 (PQQ27_13110) - 2617350..2618105 (-) 756 WP_000923760.1 ABC transporter ATP-binding protein -
  PQQ27_RS13115 (PQQ27_13115) braS 2618213..2619100 (-) 888 WP_000143425.1 nisin susceptibility-associated two-component system sensor histidine kinase NsaS Regulator
  PQQ27_RS13120 (PQQ27_13120) braR 2619111..2619776 (-) 666 WP_000697877.1 nisin susceptibility-associated two-component system response regulator NsaR Regulator
  PQQ27_RS13125 (PQQ27_13125) - 2619802..2620002 (-) 201 WP_000604730.1 hypothetical protein -
  PQQ27_RS13130 (PQQ27_13130) - 2620200..2621624 (+) 1425 WP_000953755.1 alkaline phosphatase -
  PQQ27_RS13135 (PQQ27_13135) - 2621694..2621804 (+) 111 Protein_2515 hypothetical protein -
  PQQ27_RS13140 (PQQ27_13140) - 2621907..2622362 (-) 456 WP_000106185.1 MarR family winged helix-turn-helix transcriptional regulator -
  PQQ27_RS13145 (PQQ27_13145) - 2622607..2623368 (-) 762 WP_000323441.1 alpha/beta hydrolase family protein -

Sequence


Protein


Download         Length: 295 a.a.        Molecular weight: 34006.28 Da        Isoelectric Point: 6.0874

>NTDB_id=783035 PQQ27_RS13115 WP_000143425.1 2618213..2619100(-) (braS) [Staphylococcus aureus strain ATCC 23235]
MTFLKSITQEIAIVIVIFALFGLMFYLYHLPLEAYLLALGVILLLLLIFIGIKYLSFVKTISQQQQIENLETALYQLKNE
QIEYKNDVESYFLTWVHQMKTPITAAQLLLERDEPNVVNRVRQEVIQIDNYTSLALSYLKLLNETSDISVTKISINNIIR
PIIMKYSIQFIDQKTKIHYEPCHHEVLTDVRWTSLMIEQLINNALKYARGKDIWIEFDEQSNQLHVKDNGIGISEADLPK
IFDKGYSGYNGQRQSNSSGIGLFIVKQISTHTNHPVSVVSKQNEGTTFTIQFPDE

Nucleotide


Download         Length: 888 bp        

>NTDB_id=783035 PQQ27_RS13115 WP_000143425.1 2618213..2619100(-) (braS) [Staphylococcus aureus strain ATCC 23235]
ATGACCTTTCTTAAAAGTATTACTCAGGAAATAGCAATAGTCATAGTTATTTTTGCTTTATTTGGCTTAATGTTTTACCT
GTATCATTTGCCATTAGAAGCATATTTACTAGCACTTGGCGTTATTTTATTATTATTACTCATATTCATAGGTATTAAAT
ATTTAAGTTTTGTAAAAACTATAAGCCAACAACAACAAATTGAAAACTTAGAAACTGCGTTGTATCAGCTTAAAAATGAA
CAAATTGAATATAAAAATGATGTAGAGAGCTACTTTTTAACATGGGTACATCAAATGAAAACACCCATTACTGCAGCACA
ACTGTTACTTGAAAGAGATGAGCCTAATGTTGTTAATCGTGTTCGTCAAGAGGTTATTCAAATTGATAACTATACAAGTT
TAGCACTTAGTTATTTAAAGTTATTAAATGAAACTTCTGATATTTCTGTCACTAAAATTTCGATTAATAATATCATTCGC
CCAATTATTATGAAATATTCAATACAGTTTATTGATCAAAAAACAAAAATCCATTATGAACCTTGTCATCACGAAGTATT
AACTGACGTTAGATGGACCTCTTTAATGATAGAACAATTAATAAATAATGCACTTAAGTATGCGAGAGGTAAAGATATAT
GGATTGAATTTGATGAGCAATCCAATCAATTACACGTAAAAGATAATGGTATCGGTATTAGTGAAGCGGACTTGCCTAAA
ATATTTGATAAGGGCTATTCAGGTTATAATGGCCAGCGCCAAAGTAACTCAAGTGGGATTGGTTTATTTATCGTAAAACA
AATTTCAACACACACAAACCATCCTGTTTCAGTCGTATCTAAACAAAATGAGGGTACAACATTTACGATTCAATTTCCAG
ATGAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A389PV50

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braS Staphylococcus aureus N315

100

100

1