Detailed information
Bioinformatically predicted
Overview
| Name | comFC | Type | Machinery gene |
| Locus tag | MPG37_RS00255 | Genome accession | NZ_CP094064 |
| Coordinates | 58820..59395 (+) | Length | 191 a.a. |
| NCBI ID | WP_245051108.1 | Uniprot ID | - |
| Organism | Helicobacter pylori strain Hpfe114 | ||
| Function | ssDNA transport into the cell (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 53820..64395
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MPG37_RS00230 (MPG37_00230) | uvrD | 54511..56556 (+) | 2046 | WP_245051100.1 | DNA helicase UvrD | - |
| MPG37_RS00235 (MPG37_00235) | flgA | 56553..57209 (+) | 657 | WP_245051102.1 | flagellar basal body P-ring formation chaperone FlgA | - |
| MPG37_RS00240 (MPG37_00240) | - | 57219..57782 (+) | 564 | WP_245051104.1 | UbiX family flavin prenyltransferase | - |
| MPG37_RS00245 (MPG37_00245) | coaD | 57782..58255 (+) | 474 | WP_001169261.1 | pantetheine-phosphate adenylyltransferase | - |
| MPG37_RS00250 (MPG37_00250) | tmk | 58257..58832 (+) | 576 | WP_245051106.1 | dTMP kinase | - |
| MPG37_RS00255 (MPG37_00255) | comFC | 58820..59395 (+) | 576 | WP_245051108.1 | ComF family protein | Machinery gene |
| MPG37_RS00260 (MPG37_00260) | - | 59428..59814 (+) | 387 | Protein_50 | VRR-NUC domain-containing protein | - |
| MPG37_RS00265 (MPG37_00265) | - | 59805..60572 (-) | 768 | WP_245051110.1 | Eco47II family restriction endonuclease | - |
| MPG37_RS00270 (MPG37_00270) | dcm | 60541..61572 (-) | 1032 | WP_031249189.1 | DNA (cytosine-5-)-methyltransferase | - |
| MPG37_RS00275 (MPG37_00275) | - | 61622..62749 (+) | 1128 | Protein_53 | restriction endonuclease subunit S | - |
Sequence
Protein
Download Length: 191 a.a. Molecular weight: 21371.93 Da Isoelectric Point: 9.2796
>NTDB_id=666304 MPG37_RS00255 WP_245051108.1 58820..59395(+) (comFC) [Helicobacter pylori strain Hpfe114]
MRCLTCLKLSFKPLCSNCLNDLPLNLKVRVLEGVSVYSFYAYSEIEELIKSKYALIGSRILPLLSQKAGAEFVKILQEKG
LTTPLYGIAIDDKIKSFYSHSAALLKGFCQGNLKPTYGRLRANNTISYAGKSLEFRANNPRDFTFKGDKTLDYFLLDDII
TTGTTLKEALKYLKTLNTKAHFAIALCSTDE
MRCLTCLKLSFKPLCSNCLNDLPLNLKVRVLEGVSVYSFYAYSEIEELIKSKYALIGSRILPLLSQKAGAEFVKILQEKG
LTTPLYGIAIDDKIKSFYSHSAALLKGFCQGNLKPTYGRLRANNTISYAGKSLEFRANNPRDFTFKGDKTLDYFLLDDII
TTGTTLKEALKYLKTLNTKAHFAIALCSTDE
Nucleotide
Download Length: 576 bp
>NTDB_id=666304 MPG37_RS00255 WP_245051108.1 58820..59395(+) (comFC) [Helicobacter pylori strain Hpfe114]
ATGCGTTGTTTGACTTGTTTGAAGCTTTCTTTTAAGCCCCTTTGTTCAAATTGCTTGAACGATTTGCCCTTAAATTTAAA
AGTAAGGGTTTTAGAGGGCGTGAGCGTGTATAGTTTTTACGCTTATAGCGAAATAGAAGAACTCATTAAAAGCAAATACG
CGCTGATTGGCTCTCGCATTTTGCCTTTGCTTTCTCAAAAAGCCGGTGCGGAATTTGTGAAAATCCTGCAAGAAAAAGGC
TTGACTACCCCCCTTTATGGCATCGCCATTGATGATAAAATCAAATCCTTTTACTCGCATTCAGCCGCGCTTTTAAAAGG
CTTTTGTCAAGGCAATTTAAAGCCCACTTACGGGCGTTTAAGGGCTAATAATACTATTTCGTATGCTGGGAAAAGCTTAG
AATTTCGTGCCAATAACCCACGGGATTTCACCTTCAAAGGCGATAAAACTTTAGATTATTTTTTATTAGATGATATTATC
ACCACCGGCACCACCCTAAAAGAAGCCCTAAAATACCTTAAAACCCTAAACACAAAAGCGCACTTTGCAATCGCGCTTTG
CAGCACGGATGAATGA
ATGCGTTGTTTGACTTGTTTGAAGCTTTCTTTTAAGCCCCTTTGTTCAAATTGCTTGAACGATTTGCCCTTAAATTTAAA
AGTAAGGGTTTTAGAGGGCGTGAGCGTGTATAGTTTTTACGCTTATAGCGAAATAGAAGAACTCATTAAAAGCAAATACG
CGCTGATTGGCTCTCGCATTTTGCCTTTGCTTTCTCAAAAAGCCGGTGCGGAATTTGTGAAAATCCTGCAAGAAAAAGGC
TTGACTACCCCCCTTTATGGCATCGCCATTGATGATAAAATCAAATCCTTTTACTCGCATTCAGCCGCGCTTTTAAAAGG
CTTTTGTCAAGGCAATTTAAAGCCCACTTACGGGCGTTTAAGGGCTAATAATACTATTTCGTATGCTGGGAAAAGCTTAG
AATTTCGTGCCAATAACCCACGGGATTTCACCTTCAAAGGCGATAAAACTTTAGATTATTTTTTATTAGATGATATTATC
ACCACCGGCACCACCCTAAAAGAAGCCCTAAAATACCTTAAAACCCTAAACACAAAAGCGCACTTTGCAATCGCGCTTTG
CAGCACGGATGAATGA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comFC | Helicobacter pylori 26695 |
93.194 |
100 |
0.932 |