Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   B2K_RS35915 Genome accession   NC_017672
Coordinates   8699124..8700074 (-) Length   316 a.a.
NCBI ID   WP_041618560.1    Uniprot ID   -
Organism   Paenibacillus mucilaginosus K02     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 8694124..8705074
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  B2K_RS35890 (B2K_37135) - 8694505..8695326 (-) 822 WP_014653127.1 MIP/aquaporin family protein -
  B2K_RS35895 (B2K_37140) - 8695538..8696104 (-) 567 WP_014653128.1 glycerol-3-phosphate responsive antiterminator -
  B2K_RS35900 (B2K_37145) - 8696385..8697350 (-) 966 WP_014653129.1 siderophore ABC transporter substrate-binding protein -
  B2K_RS35905 (B2K_37150) - 8697429..8698187 (-) 759 WP_014653130.1 ABC transporter ATP-binding protein -
  B2K_RS35910 (B2K_37155) - 8698181..8699131 (-) 951 WP_013921476.1 iron chelate uptake ABC transporter family permease subunit -
  B2K_RS35915 (B2K_37160) ceuB 8699124..8700074 (-) 951 WP_041618560.1 ABC transporter permease Machinery gene
  B2K_RS35920 (B2K_37165) - 8700331..8701509 (-) 1179 WP_013921478.1 NAD(P)/FAD-dependent oxidoreductase -
  B2K_RS35925 (B2K_37170) - 8701541..8701987 (-) 447 WP_013921479.1 DUF1641 domain-containing protein -
  B2K_RS35935 (B2K_37175) gluQRS 8702641..8703606 (+) 966 WP_014653132.1 tRNA glutamyl-Q(34) synthetase GluQRS -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 35038.35 Da        Isoelectric Point: 9.6654

>NTDB_id=50306 B2K_RS35915 WP_041618560.1 8699124..8700074(-) (ceuB) [Paenibacillus mucilaginosus K02]
MKRRYLVIALIFLSFCSVFIGVKDISPLDIFTLREDQLQILLVSRLPRLLSILMAGVSMSIIGLIMQQLSRNKFVSPTTS
GTEDSARFGIMVAMLLFASASPLEKMLVAFVFALAGTFIFMRILDKVKYKDSIFIPLVGLMFGNIVSSITTFFAYKYDLV
QSMSAWLMGDFSMIVKGRYEMLYISIPLVIAAYVFADKFTVAGMGEDFAMNLGLNYKQVVNLGLVLVSLVSAVVILTVGM
IPFLGLIVPNIVTILRGDHLRKSLPDTAMVGAVFVLFCDVLGRVIIYPYEISIGLTVGVIGSAIFLYLLMRRKAYE

Nucleotide


Download         Length: 951 bp        

>NTDB_id=50306 B2K_RS35915 WP_041618560.1 8699124..8700074(-) (ceuB) [Paenibacillus mucilaginosus K02]
ATGAAAAGAAGATATCTAGTGATTGCATTGATTTTTCTGTCATTCTGCTCCGTCTTCATCGGAGTGAAAGATATTTCACC
TCTGGATATCTTTACCTTAAGGGAAGATCAGCTTCAGATTCTGCTGGTAAGCAGACTGCCCCGGCTGCTGAGCATTCTGA
TGGCCGGTGTGAGCATGAGCATCATCGGACTGATCATGCAGCAGCTCAGCCGCAACAAGTTCGTGTCCCCGACCACCTCG
GGGACGGAGGATTCGGCGCGGTTCGGCATCATGGTGGCGATGCTCCTGTTCGCCTCCGCTTCTCCGCTTGAGAAGATGCT
GGTAGCCTTCGTATTTGCCCTCGCCGGGACGTTCATCTTCATGCGAATTCTCGACAAGGTGAAGTACAAGGATTCGATCT
TCATTCCTCTGGTGGGGCTGATGTTCGGCAATATCGTCTCTTCCATCACGACCTTCTTCGCCTATAAGTACGATCTCGTC
CAGAGCATGTCCGCCTGGCTGATGGGGGACTTCTCGATGATCGTCAAAGGGCGGTACGAGATGCTGTATATCAGCATTCC
GCTCGTGATTGCGGCTTACGTGTTCGCCGATAAGTTCACGGTTGCGGGAATGGGCGAGGACTTCGCCATGAATCTCGGGC
TGAATTACAAGCAGGTCGTCAATCTCGGCCTGGTGCTGGTCTCTCTGGTATCGGCGGTCGTGATCCTGACAGTCGGCATG
ATACCGTTCCTCGGGCTCATCGTACCGAACATCGTGACGATCCTGCGGGGCGACCATCTGAGGAAGAGTCTGCCCGATAC
GGCCATGGTCGGCGCCGTGTTCGTTCTGTTCTGCGATGTGCTCGGACGCGTCATCATTTATCCGTATGAGATCTCGATCG
GTCTGACGGTCGGGGTCATCGGCAGCGCGATCTTCCTGTACCTGCTAATGAGGAGAAAGGCATATGAATAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(10-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

51.266

100

0.513

Multiple sequence alignment