Detailed information NTG0494662

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: IM687_RS21855
• Genome accession: NZ_CP063358
• Coordinates: 1094912..1095097 (-)
• Length: 61 a.a.
• NCBI ID: WP_272873510.1
• Uniprot ID: -
• Organism: Stutzerimonas stutzeri strain ZDHY95
• Function: type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1089912..1100097

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
IM687_RS05195 (IM687_05195)	-	1090813..1091856 (-)	1044	WP_185745002.1	acyltransferase family protein	-
IM687_RS05200 (IM687_05200)	-	1091880..1092764 (-)	885	WP_125883209.1	ABC transporter ATP-binding protein	-
IM687_RS05205 (IM687_05205)	-	1092761..1093594 (-)	834	WP_196112074.1	hypothetical protein	-
IM687_RS05210 (IM687_05210)	-	1093591..1094391 (-)	801	WP_196112075.1	hypothetical protein	-
IM687_RS05215 (IM687_05215)	-	1094452..1094892 (-)	441	WP_196112076.1	hypothetical protein	-
IM687_RS21855 (IM687_05220)	pilA	1094912..1095097 (-)	186	WP_272873510.1	type IV pilin protein	Machinery gene
IM687_RS05225 (IM687_05225)	pilB	1095425..1097128 (+)	1704	WP_196112077.1	type IV-A pilus assembly ATPase PilB	Machinery gene
IM687_RS05230 (IM687_05230)	-	1097131..1098352 (+)	1222	Protein_1032	type II secretion system F family protein	-
IM687_RS05235 (IM687_05235)	pilD	1098358..1099221 (+)	864	WP_196112078.1	prepilin peptidase	Machinery gene
IM687_RS05240 (IM687_05240)	coaE	1099353..1099961 (+)	609	WP_196112079.1	dephospho-CoA kinase	-

Sequence

Protein

• Length: 61 a.a.
• Molecular weight: 6553.68 Da
• Isoelectric Point: 10.1002

>NTDB_id=494662 IM687_RS21855 WP_272873510.1 1094912..1095097(-) (pilA) [Stutzerimonas stutzeri strain ZDHY95]
MKSIKKQKGFTLIELMIVVAIIGILAAVAIPQFQEYQAKGYDKSAQSDARNVLTGGIANSN

Nucleotide

• Length: 186 bp

>NTDB_id=494662 IM687_RS21855 WP_272873510.1 1094912..1095097(-) (pilA) [Stutzerimonas stutzeri strain ZDHY95]
ATGAAGTCCATCAAGAAGCAAAAGGGTTTCACCCTGATCGAACTGATGATCGTGGTAGCAATCATCGGTATTCTGGCCGC
AGTAGCCATTCCGCAGTTCCAAGAATATCAAGCCAAGGGCTACGACAAATCGGCTCAATCTGACGCCCGTAACGTATTGA
CTGGCGGCATCGCCAACTCCAACTAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (5-29)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Acinetobacter baumannii strain A118	67.347	80.328	0.541
pilA	Ralstonia pseudosolanacearum GMI1000	54.237	96.721	0.525
pilA	Pseudomonas aeruginosa PAK	73.81	68.852	0.508
pilA	Vibrio campbellii strain DS40M4	77.778	59.016	0.459
pilV	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	56	81.967	0.459
pilA	Vibrio parahaemolyticus RIMD 2210633	56	81.967	0.459
pilA	Acinetobacter nosocomialis M2	84.848	54.098	0.459
pilA/pilAII	Pseudomonas stutzeri DSM 10701	58.696	75.41	0.443
pilA	Vibrio cholerae C6706	77.143	57.377	0.443
pilA	Vibrio cholerae strain A1552	77.143	57.377	0.443
pilA	Vibrio cholerae O1 biovar El Tor strain E7946	77.143	57.377	0.443
pilA2	Legionella pneumophila str. Paris	76.471	55.738	0.426
pilA2	Legionella pneumophila strain ERS1305867	76.471	55.738	0.426
pilA/pilA1	Eikenella corrodens VA1	74.286	57.377	0.426
comF	Acinetobacter baylyi ADP1	55.556	73.77	0.41
pilE	Neisseria gonorrhoeae MS11	75.758	54.098	0.41
pilE	Neisseria gonorrhoeae strain FA1090	75.758	54.098	0.41
pilA/pilAI	Pseudomonas stutzeri DSM 10701	75.758	54.098	0.41
pilE	Acinetobacter baumannii D1279779	54.348	75.41	0.41
pilX	Neisseria meningitidis 8013	66.667	59.016	0.393
pilL	Neisseria gonorrhoeae MS11	66.667	59.016	0.393
pilE	Neisseria elongata subsp. glycolytica ATCC 29315	72.727	54.098	0.393
pilA	Haemophilus influenzae 86-028NP	69.697	54.098	0.377
pilA	Haemophilus influenzae Rd KW20	69.697	54.098	0.377