Detailed information NTG0042351

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: HPB14_RS00755
• Genome accession: NC_017733
• Coordinates: 152366..153409 (+)
• Length: 347 a.a.
• NCBI ID: WP_000952108.1
• Uniprot ID: -
• Organism: Helicobacter pylori HUP-B14
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 147366..158409

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HPB14_RS00720 (HPB14_00700)	-	147960..148178 (+)	219	WP_001847091.1	cytochrome c oxidase, cbb3-type, CcoQ subunit	-
HPB14_RS00725 (HPB14_00705)	ccoP	148180..149058 (+)	879	WP_000346894.1	cytochrome-c oxidase, cbb3-type subunit III	-
HPB14_RS00730 (HPB14_00710)	-	149069..149275 (+)	207	WP_000670506.1	DUF4006 family protein	-
HPB14_RS00735 (HPB14_00720)	-	149376..149960 (+)	585	WP_001221994.1	hypothetical protein	-
HPB14_RS00740 (HPB14_00725)	-	149972..150553 (+)	582	WP_000660353.1	hypothetical protein	-
HPB14_RS00745 (HPB14_00730)	-	150641..151408 (+)	768	WP_000506317.1	hypothetical protein	-
HPB14_RS00750 (HPB14_00735)	-	151405..152268 (-)	864	WP_000626298.1	menaquinone biosynthesis family protein	-
HPB14_RS00755 (HPB14_00740)	recA	152366..153409 (+)	1044	WP_000952108.1	recombinase RecA	Machinery gene
HPB14_RS00760 (HPB14_00745)	eno	153420..154700 (+)	1281	WP_000955632.1	phosphopyruvate hydratase	-
HPB14_RS00765 (HPB14_00750)	-	154693..154968 (+)	276	WP_000168600.1	hypothetical protein	-
HPB14_RS00770 (HPB14_00755)	-	154985..155581 (+)	597	WP_014658408.1	AMIN domain-containing protein	-
HPB14_RS00775 (HPB14_00760)	-	155586..156074 (+)	489	WP_001164281.1	shikimate kinase	-
HPB14_RS00780 (HPB14_00765)	-	156096..157052 (+)	957	WP_000952272.1	PDC sensor domain-containing protein	-
HPB14_RS00785 (HPB14_00770)	-	157057..158151 (-)	1095	WP_000028820.1	glycosyltransferase family 8 protein	-

Sequence

Protein

• Length: 347 a.a.
• Molecular weight: 37653.40 Da
• Isoelectric Point: 5.3408

>NTDB_id=42351 HPB14_RS00755 WP_000952108.1 152366..153409(+) (recA) [Helicobacter pylori HUP-B14]
MAIDEDKQKAISLAIKQIDKVFGKGALVRLGDKQVEKIDAISTGSLGLDLALGIGGVPKGRIIEIYGPESSGKTTLSLHI
IAECQKNGGVCAFIDAEHALDVYYAKRLGVDTENLLVSQPSTGEEALEILETITRSGGIDLVVVDSVAALTPKAEIDGDM
GDQHVGLQARLMSHALRKITGVLHKMNTTLIFINQIRMKIGMMGYGSPETTTGGNALKFYASVRIDIRRIAALKQNEQHI
GNRAKAKVVKNKVAPPFREAEFDIMFGEGISKEGEIIDYGVKLDIVDKSGAWLSYQDKKLGQGRENAKALLKEDKALADE
ITLKIKESIGSNEEIMPLPDEPLEEME

Nucleotide

• Length: 1044 bp

>NTDB_id=42351 HPB14_RS00755 WP_000952108.1 152366..153409(+) (recA) [Helicobacter pylori HUP-B14]
ATGGCAATAGATGAAGACAAACAAAAAGCGATTTCTTTAGCGATCAAACAAATTGATAAGGTTTTTGGTAAGGGGGCGTT
GGTGCGCCTTGGGGATAAGCAAGTAGAAAAGATTGACGCTATTTCTACAGGCTCGTTAGGATTGGATTTAGCTTTAGGGA
TTGGGGGCGTTCCAAAGGGTAGGATCATTGAAATTTATGGGCCAGAGTCAAGCGGGAAGACCACTTTAAGCTTGCATATT
ATTGCAGAATGCCAAAAAAATGGCGGCGTGTGCGCATTCATTGACGCTGAGCATGCCCTAGATGTGTATTATGCTAAGAG
GCTGGGCGTGGATACGGAAAATCTACTCGTTTCCCAACCAAGCACAGGCGAAGAAGCTTTAGAGATTTTAGAAACGATCA
CCAGAAGCGGAGGGATTGATTTAGTGGTGGTGGATTCGGTGGCGGCTCTTACGCCTAAAGCGGAGATTGATGGGGATATG
GGCGATCAGCATGTGGGCTTGCAAGCAAGGCTTATGAGCCATGCGTTAAGAAAAATCACCGGTGTTTTGCACAAGATGAA
CACTACTCTCATTTTTATCAATCAAATCAGGATGAAGATTGGCATGATGGGTTATGGGAGTCCAGAGACCACAACCGGAG
GTAACGCTTTAAAATTCTATGCGAGCGTTAGGATTGATATTAGAAGAATCGCCGCTTTAAAACAAAACGAGCAGCATATC
GGTAACAGGGCTAAAGCCAAAGTGGTTAAAAATAAAGTCGCTCCGCCTTTTAGAGAAGCGGAATTTGACATCATGTTTGG
GGAGGGGATTTCTAAAGAGGGCGAAATCATTGACTATGGCGTGAAATTAGACATTGTGGATAAGAGTGGGGCATGGCTTA
GCTACCAGGATAAAAAGCTAGGGCAAGGCCGAGAAAACGCTAAAGCCCTATTGAAAGAAGATAAAGCCCTAGCGGATGAA
ATCACTCTTAAGATTAAAGAGAGTATTGGCTCTAATGAAGAGATCATGCCCTTACCCGATGAGCCTTTAGAAGAAATGGA
ATAA

Domains

Predicted by InterProScan.

• recA bacterial DNA recombination protein (RecA_N) (9-271)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Helicobacter pylori strain NCTC11637	99.135	100	0.991
recA	Helicobacter pylori 26695	98.559	100	0.986
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	78.354	94.524	0.741
recA	Neisseria gonorrhoeae MS11	66.154	93.66	0.62
recA	Staphylococcus aureus strain ATCC 12600	63.05	98.271	0.62
recA	Neisseria gonorrhoeae strain FA1090	66.154	93.66	0.62
recA	Acinetobacter nosocomialis M2	62.573	98.559	0.617
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	63.554	95.677	0.608
recA	Bacillus subtilis subsp. subtilis str. 168	64.615	93.66	0.605
recA	Acinetobacter baumannii D1279779	63.609	94.236	0.599
recA	Acinetobacter baylyi ADP1	63.303	94.236	0.597
recA	Ralstonia pseudosolanacearum GMI1000	61.31	96.83	0.594
recA	Pseudomonas stutzeri DSM 10701	59.649	98.559	0.588
recA	Vibrio cholerae strain A1552	60.714	96.83	0.588
recA	Vibrio cholerae O1 biovar El Tor strain E7946	60.714	96.83	0.588
recA	Glaesserella parasuis strain SC1401	60.061	94.524	0.568
recA	Streptococcus pneumoniae R6	55.556	100	0.562
recA	Streptococcus pneumoniae R36A	55.556	100	0.562
recA	Streptococcus pneumoniae Rx1	55.556	100	0.562
recA	Streptococcus pneumoniae D39	55.556	100	0.562
recA	Streptococcus pneumoniae TIGR4	55.556	100	0.562
recA	Latilactobacillus sakei subsp. sakei 23K	54.342	100	0.559
recA	Streptococcus pyogenes NZ131	57.273	95.101	0.545
recA	Lactococcus lactis subsp. cremoris KW2	57.447	94.813	0.545
recA	Streptococcus mitis NCTC 12261	57.143	94.813	0.542
recA	Streptococcus mitis SK321	56.839	94.813	0.539
recA	Streptococcus mutans UA159	55.689	96.254	0.536
recA	Streptococcus thermophilus LMD-9	56.061	95.101	0.533
recA	Streptococcus thermophilus LMG 18311	56.061	95.101	0.533
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	55.828	93.948	0.524