Detailed information NTG0037548

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: HPV225_RS00765
• Genome accession: NC_017355
• Coordinates: 152485..153528 (+)
• Length: 347 a.a.
• NCBI ID: WP_000963126.1
• Uniprot ID: -
• Organism: Helicobacter pylori v225d
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 147485..158528

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HPV225_RS00730 (HPV225_0160)	-	148082..148300 (+)	219	WP_014533600.1	cytochrome c oxidase, cbb3-type, CcoQ subunit	-
HPV225_RS00735 (HPV225_0161)	ccoP	148302..149180 (+)	879	WP_000346811.1	cytochrome-c oxidase, cbb3-type subunit III	-
HPV225_RS00740 (HPV225_0162)	-	149191..149397 (+)	207	WP_000670496.1	DUF4006 family protein	-
HPV225_RS00745 (HPV225_0164)	-	149498..150082 (+)	585	WP_001222018.1	hypothetical protein	-
HPV225_RS00750 (HPV225_0165)	-	150094..150675 (+)	582	WP_000660405.1	hypothetical protein	-
HPV225_RS00755 (HPV225_0166)	-	150759..151526 (+)	768	WP_000506348.1	hypothetical protein	-
HPV225_RS00760 (HPV225_0167)	-	151523..152386 (-)	864	WP_000626329.1	menaquinone biosynthesis family protein	-
HPV225_RS00765 (HPV225_0168)	recA	152485..153528 (+)	1044	WP_000963126.1	recombinase RecA	Machinery gene
HPV225_RS00770 (HPV225_0169)	eno	153540..154820 (+)	1281	WP_000955663.1	phosphopyruvate hydratase	-
HPV225_RS00775 (HPV225_0170)	-	154813..155088 (+)	276	WP_000146218.1	hypothetical protein	-
HPV225_RS00780 (HPV225_0171)	-	155104..155700 (+)	597	WP_014533601.1	AMIN domain-containing protein	-
HPV225_RS00785 (HPV225_0172)	-	155705..156193 (+)	489	WP_001164297.1	shikimate kinase	-
HPV225_RS00790 (HPV225_0173)	-	156215..157171 (+)	957	WP_000952255.1	PDC sensor domain-containing protein	-
HPV225_RS00795 (HPV225_0174)	-	157168..158406 (-)	1239	WP_000022428.1	glycosyltransferase family 8 protein	-

Sequence

Protein

• Length: 347 a.a.
• Molecular weight: 37669.40 Da
• Isoelectric Point: 5.7176

>NTDB_id=37548 HPV225_RS00765 WP_000963126.1 152485..153528(+) (recA) [Helicobacter pylori v225d]
MAIDEDKQKAISLAIKQIDKVFGKGALVRLGDKQVEKIDSISTGSLGLDLALGIGGVPKGRIIEIYGPESSGKTTLSLHI
IAECQKNGGVCAFIDAEHALDVHYAKRLGVDTENLLVSQPDTGEQALEILETITRSGGIDLVVVDSVAALTPKAEIDGDM
GDQHVGLQARLMSHALRKITGVLHKMNTTLIFINQIRMKIGMMGYGSPETTTGGNALKFYASVRIDIRRIAALKQNEQHI
GNRAKAKVVKNKVAPPFREAEFDIMFGEGISKEGEIIDYGVKLDIVDKSGAWLSYQDKKLGQGRENAKALLKEDKALANE
ITLKIKESIGSNEEIMPLPDEPLEEME

Nucleotide

• Length: 1044 bp

>NTDB_id=37548 HPV225_RS00765 WP_000963126.1 152485..153528(+) (recA) [Helicobacter pylori v225d]
ATGGCAATAGATGAAGACAAACAAAAAGCGATTTCTTTAGCGATCAAACAAATTGATAAGGTTTTTGGTAAGGGGGCGTT
GGTGCGCCTTGGGGATAAGCAAGTAGAAAAGATTGACTCTATTTCTACAGGCTCATTAGGGTTGGATCTGGCTTTAGGGA
TTGGGGGCGTTCCAAAAGGTAGGATCATTGAAATTTATGGGCCAGAGTCAAGCGGGAAGACCACTCTAAGCTTGCATATC
ATTGCAGAATGCCAAAAAAATGGGGGCGTGTGTGCGTTTATTGACGCTGAGCATGCCCTAGATGTGCATTATGCTAAGAG
ATTGGGCGTGGATACGGAAAACTTACTCGTTTCCCAACCTGATACAGGCGAGCAAGCCTTAGAGATTTTAGAAACGATCA
CCAGAAGCGGAGGGATTGATTTAGTGGTGGTGGATTCCGTAGCGGCTCTTACGCCTAAAGCGGAGATTGATGGGGATATG
GGCGATCAGCATGTGGGCTTGCAAGCAAGGCTTATGAGCCATGCGTTAAGAAAGATCACCGGTGTTTTGCACAAGATGAA
CACTACTTTAATTTTTATCAATCAAATCAGGATGAAGATTGGCATGATGGGTTATGGGAGTCCAGAGACCACAACCGGAG
GTAATGCTTTAAAATTCTATGCGAGCGTTAGGATTGATATTAGAAGGATTGCGGCTTTAAAACAAAACGAACAGCATATT
GGCAATAGGGCTAAAGCCAAAGTGGTTAAAAATAAAGTCGCTCCGCCCTTTAGAGAAGCGGAATTTGACATCATGTTTGG
GGAAGGGATTTCTAAAGAGGGCGAAATCATTGATTATGGCGTGAAATTAGACATTGTGGATAAGAGTGGGGCATGGCTTA
GCTACCAGGATAAAAAGCTAGGGCAAGGCCGAGAAAACGCTAAAGCCTTACTGAAAGAAGACAAAGCCCTAGCGAATGAA
ATCACTCTTAAGATTAAAGAGAGTATTGGCTCTAATGAAGAGATCATGCCCTTACCAGATGAGCCTTTAGAAGAAATGGA
ATAG

Domains

Predicted by InterProScan.

• recA bacterial DNA recombination protein (RecA_N) (9-271)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Helicobacter pylori strain NCTC11637	99.424	100	0.994
recA	Helicobacter pylori 26695	99.424	100	0.994
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	78.963	94.524	0.746
recA	Staphylococcus aureus strain ATCC 12600	63.636	98.271	0.625
recA	Neisseria gonorrhoeae MS11	66.462	93.66	0.622
recA	Neisseria gonorrhoeae strain FA1090	66.462	93.66	0.622
recA	Acinetobacter nosocomialis M2	62.865	98.559	0.62
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	64.458	95.677	0.617
recA	Bacillus subtilis subsp. subtilis str. 168	65.231	93.66	0.611
recA	Acinetobacter baumannii D1279779	63.914	94.236	0.602
recA	Acinetobacter baylyi ADP1	63.609	94.236	0.599
recA	Ralstonia pseudosolanacearum GMI1000	61.905	96.83	0.599
recA	Pseudomonas stutzeri DSM 10701	60.526	98.559	0.597
recA	Vibrio cholerae strain A1552	61.31	96.83	0.594
recA	Vibrio cholerae O1 biovar El Tor strain E7946	61.31	96.83	0.594
recA	Glaesserella parasuis strain SC1401	60.671	94.524	0.573
recA	Streptococcus pneumoniae R6	55.84	100	0.565
recA	Streptococcus pneumoniae R36A	55.84	100	0.565
recA	Streptococcus pneumoniae Rx1	55.84	100	0.565
recA	Streptococcus pneumoniae D39	55.84	100	0.565
recA	Streptococcus pneumoniae TIGR4	55.84	100	0.565
recA	Latilactobacillus sakei subsp. sakei 23K	54.622	100	0.562
recA	Streptococcus pyogenes NZ131	57.576	95.101	0.548
recA	Lactococcus lactis subsp. cremoris KW2	57.751	94.813	0.548
recA	Streptococcus mitis NCTC 12261	57.447	94.813	0.545
recA	Streptococcus mitis SK321	57.447	94.813	0.545
recA	Streptococcus thermophilus LMD-9	56.667	95.101	0.539
recA	Streptococcus thermophilus LMG 18311	56.667	95.101	0.539
recA	Streptococcus mutans UA159	55.988	96.254	0.539
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	56.442	93.948	0.53