Detailed information NTG0369058

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: FY147_RS08210
• Genome accession: NZ_CP048502
• Coordinates: 1610561..1611652 (-)
• Length: 363 a.a.
• NCBI ID: WP_020012874.1
• Uniprot ID: A0A822UZH2
• Organism: Agrobacterium tumefaciens strain Teh001
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1605561..1616652

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FY147_RS08200 (FY147_08130)	-	1606952..1607578 (+)	627	WP_003507880.1	glutathione S-transferase family protein	-
FY147_RS08205 (FY147_08135)	alaS	1607667..1610330 (-)	2664	WP_087744199.1	alanine--tRNA ligase	-
FY147_RS08210 (FY147_08140)	recA	1610561..1611652 (-)	1092	WP_020012874.1	recombinase RecA	Machinery gene
FY147_RS08215 (FY147_08145)	-	1611899..1612840 (+)	942	WP_003507876.1	carbohydrate kinase family protein	-
FY147_RS08220 (FY147_08150)	-	1612870..1613793 (+)	924	WP_003507874.1	pseudouridine-5'-phosphate glycosidase	-
FY147_RS08225 (FY147_08155)	-	1613978..1616254 (-)	2277	WP_236772022.1	OmpA family protein	-

Sequence

Protein

• Length: 363 a.a.
• Molecular weight: 38758.17 Da
• Isoelectric Point: 4.9722

>NTDB_id=369058 FY147_RS08210 WP_020012874.1 1610561..1611652(-) (recA) [Agrobacterium tumefaciens strain Teh001]
MAQNSLRLVEDKSVDKSKALEAALSQIERSFGKGSIMKLGSNENVVEVETVSTGSLSLDIALGIGGLPKGRIVEIYGPES
SGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQGLLISQPDTGEQALEITDTLVRSGAVDVLVVDSVAAL
TPRAEIEGEMGDSLPGLQARLMSQALRKLTASISKSKCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIG
AVKEREEVVGNQTRVKVVKNKMAPPFKQVEFDIMYGEGVSKTGELVDLGVKAGIVEKSGAWFSYNSQRLGQGRENAKTFL
RDNPETANEIELALRQNAGLIADRFLQNGGPDAGEGDDGSDEG

Nucleotide

• Length: 1092 bp

>NTDB_id=369058 FY147_RS08210 WP_020012874.1 1610561..1611652(-) (recA) [Agrobacterium tumefaciens strain Teh001]
ATGGCACAAAATTCTTTGCGTCTCGTAGAGGATAAATCGGTGGATAAAAGCAAGGCACTGGAAGCGGCGCTCTCCCAGAT
CGAACGGTCGTTCGGCAAGGGATCGATTATGAAGCTCGGTTCCAATGAAAATGTGGTTGAGGTGGAGACTGTTTCGACGG
GTTCTCTCAGCCTGGATATCGCGCTCGGCATCGGCGGTTTGCCGAAGGGGCGCATCGTTGAAATTTATGGCCCGGAAAGC
TCGGGTAAGACGACGCTGGCGCTGCAGACGATTGCGGAAGCCCAGAAAAAGGGCGGCATCTGCGCCTTCGTGGATGCCGA
GCATGCGCTCGATCCGGTCTATGCCCGCAAGCTTGGCGTGGATTTGCAAGGCCTTCTTATCTCGCAGCCCGATACGGGCG
AGCAGGCGCTTGAGATCACCGATACGCTGGTGCGTTCCGGCGCGGTTGATGTCCTCGTGGTCGACTCCGTTGCGGCGCTG
ACGCCGCGGGCGGAAATCGAAGGCGAGATGGGTGACAGCCTGCCGGGTCTTCAGGCCCGCCTGATGAGCCAGGCGCTGCG
CAAGCTGACCGCTTCGATCTCCAAGTCGAAATGCATGGTCATCTTCATCAACCAGATCCGCATGAAGATCGGCGTCATGT
TCGGTTCGCCGGAAACGACGACAGGCGGTAACGCTCTCAAGTTCTATGCGTCCGTTCGCCTCGACATCCGCCGTATCGGC
GCCGTCAAGGAGCGCGAAGAGGTTGTCGGCAACCAGACCCGCGTCAAGGTCGTCAAGAACAAGATGGCTCCGCCCTTCAA
GCAGGTGGAATTCGACATCATGTATGGCGAGGGTGTTTCCAAGACCGGTGAACTCGTCGACCTCGGCGTGAAGGCCGGTA
TCGTCGAAAAATCCGGTGCATGGTTCTCCTATAACAGTCAGCGTCTGGGGCAGGGGCGTGAAAACGCCAAGACCTTCCTG
CGCGACAATCCGGAAACGGCAAATGAGATCGAACTGGCATTGCGCCAGAATGCCGGTCTGATCGCCGACCGCTTCCTGCA
GAATGGCGGCCCGGATGCCGGTGAAGGCGACGACGGCAGCGACGAGGGCTGA

Domains

Predicted by InterProScan.

• recA bacterial DNA recombination protein (RecA_N) (18-280)

3D structure

• AlphaFold DB: A0A822UZH2

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Acinetobacter baylyi ADP1	72.05	88.705	0.639
recA	Acinetobacter baumannii D1279779	71.739	88.705	0.636
recA	Vibrio cholerae strain A1552	71.739	88.705	0.636
recA	Vibrio cholerae O1 biovar El Tor strain E7946	71.739	88.705	0.636
recA	Acinetobacter nosocomialis M2	71.429	88.705	0.634
recA	Glaesserella parasuis strain SC1401	67.055	94.49	0.634
recA	Ralstonia pseudosolanacearum GMI1000	72.93	86.501	0.631
recA	Pseudomonas stutzeri DSM 10701	70.405	88.43	0.623
recA	Neisseria gonorrhoeae strain FA1090	69.969	88.981	0.623
recA	Neisseria gonorrhoeae MS11	69.969	88.981	0.623
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	66.055	90.083	0.595
recA	Bacillus subtilis subsp. subtilis str. 168	65.644	89.807	0.59
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	65.443	90.083	0.59
recA	Staphylococcus aureus strain ATCC 12600	64.724	89.807	0.581
recA	Helicobacter pylori strain NCTC11637	64.417	89.807	0.579
recA	Helicobacter pylori 26695	64.11	89.807	0.576
recA	Streptococcus thermophilus LMG 18311	58.028	97.796	0.567
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	64.669	87.328	0.565
recA	Latilactobacillus sakei subsp. sakei 23K	62.577	89.807	0.562
recA	Streptococcus mitis NCTC 12261	61.631	91.185	0.562
recA	Streptococcus mitis SK321	61.631	91.185	0.562
recA	Streptococcus pneumoniae Rx1	61.329	91.185	0.559
recA	Streptococcus pneumoniae R36A	61.329	91.185	0.559
recA	Streptococcus pneumoniae D39	61.329	91.185	0.559
recA	Streptococcus pneumoniae R6	61.329	91.185	0.559
recA	Streptococcus pneumoniae TIGR4	61.329	91.185	0.559
recA	Streptococcus thermophilus LMD-9	61.027	91.185	0.556
recA	Streptococcus mutans UA159	60.725	91.185	0.554
recA	Streptococcus pyogenes NZ131	60.486	90.634	0.548
recA	Lactococcus lactis subsp. cremoris KW2	59.459	91.736	0.545