Detailed information NTG0035281

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: HPELS_RS00785
• Genome accession: NC_017063
• Coordinates: 159125..160168 (+)
• Length: 347 a.a.
• NCBI ID: WP_000963112.1
• Uniprot ID: -
• Organism: Helicobacter pylori ELS37
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 154125..165168

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HPELS_RS00750 (HPELS_00740)	-	154706..154924 (+)	219	WP_001847091.1	cytochrome c oxidase, cbb3-type, CcoQ subunit	-
HPELS_RS00755 (HPELS_00745)	ccoP	154926..155804 (+)	879	WP_000346887.1	cytochrome-c oxidase, cbb3-type subunit III	-
HPELS_RS00760 (HPELS_00750)	-	155815..156021 (+)	207	WP_000670506.1	DUF4006 family protein	-
HPELS_RS00765 (HPELS_00760)	-	156122..156715 (+)	594	WP_000677516.1	hypothetical protein	-
HPELS_RS00770 (HPELS_00765)	-	156728..157309 (+)	582	WP_000660303.1	hypothetical protein	-
HPELS_RS00775 (HPELS_00770)	-	157399..158166 (+)	768	WP_000506283.1	hypothetical protein	-
HPELS_RS00780 (HPELS_00775)	-	158163..159026 (-)	864	WP_000626241.1	menaquinone biosynthesis family protein	-
HPELS_RS00785 (HPELS_00780)	recA	159125..160168 (+)	1044	WP_000963112.1	recombinase RecA	Machinery gene
HPELS_RS00790 (HPELS_00785)	eno	160179..161459 (+)	1281	WP_000955658.1	phosphopyruvate hydratase	-
HPELS_RS00795 (HPELS_00790)	-	161452..161727 (+)	276	WP_000841065.1	hypothetical protein	-
HPELS_RS00800 (HPELS_00795)	-	161744..162340 (+)	597	WP_014419491.1	AMIN domain-containing protein	-
HPELS_RS00805 (HPELS_00800)	-	162345..162833 (+)	489	WP_001164277.1	shikimate kinase	-
HPELS_RS00810 (HPELS_00805)	-	162855..163811 (+)	957	WP_000952283.1	PDC sensor domain-containing protein	-
HPELS_RS00815 (HPELS_00810)	-	163808..164911 (-)	1104	WP_000022401.1	glycosyltransferase family 8 protein	-

Sequence

Protein

• Length: 347 a.a.
• Molecular weight: 37668.41 Da
• Isoelectric Point: 5.5216

>NTDB_id=35281 HPELS_RS00785 WP_000963112.1 159125..160168(+) (recA) [Helicobacter pylori ELS37]
MAIDEDKQKAISLAIKQIDKVFGKGALVRLGDKQVEKIDAISTGSLGLDLALGIGGVPKGRIIEIYGPESSGKTTLSLHI
IAECQKNGGVCAFIDAEHALDVYYAKRLGVDTENLLVSQPSTGEEALEILETITRSGGIDLVVVDSVAALTPKAEIDGDM
GDQHVGLQARLMSHALRKITGVLHKMNTTLIFINQIRMKIGMMGYGSPETTTGGNALKFYASVRIDIRRIASLKQNEQHI
GNRAKAKVVKNKVAPPFREAEFDIMFGEGISKEGEIIDYGVKLDIVDKSGAWLSYQDKKLGQGRENAKALLKEDKALANE
ITLKIKESIGSNEEIMPLPDEPLEEME

Nucleotide

• Length: 1044 bp

>NTDB_id=35281 HPELS_RS00785 WP_000963112.1 159125..160168(+) (recA) [Helicobacter pylori ELS37]
ATGGCAATAGATGAAGACAAACAAAAAGCGATTTCTTTAGCGATCAAACAAATTGATAAGGTTTTTGGTAAGGGGGCGTT
GGTGCGCCTTGGGGATAAGCAAGTAGAAAAGATTGACGCTATTTCTACAGGCTCGTTAGGGTTGGATCTGGCTTTAGGGA
TTGGGGGCGTTCCAAAGGGTAGGATCATTGAAATTTATGGGCCAGAGTCAAGCGGAAAAACCACTCTAAGCTTGCACATT
ATCGCAGAATGCCAAAAAAATGGTGGCGTGTGCGCGTTCATTGACGCTGAACATGCCCTAGACGTGTATTATGCTAAGAG
ATTGGGCGTGGATACGGAAAATTTACTCGTTTCCCAACCAAGCACGGGCGAAGAAGCTTTAGAGATTTTAGAAACGATCA
CCAGAAGCGGAGGGATTGATTTAGTGGTGGTGGATTCGGTGGCGGCTCTTACGCCTAAAGCAGAGATTGATGGGGATATG
GGCGATCAGCATGTGGGCTTGCAAGCAAGGCTTATGAGCCATGCGTTAAGAAAAATCACCGGTGTCTTGCACAAGATGAA
CACTACTCTCATTTTTATCAATCAAATCAGGATGAAGATTGGCATGATGGGTTATGGGAGTCCAGAGACCACAACCGGGG
GTAATGCCTTAAAATTCTATGCGAGCGTTAGGATTGATATTAGAAGAATCGCCTCTCTCAAGCAAAACGAACAGCATATC
GGTAATAGGGCTAAAGCCAAAGTGGTTAAAAATAAAGTCGCTCCGCCCTTTAGAGAAGCGGAATTTGACATCATGTTTGG
GGAAGGGATTTCTAAAGAGGGCGAAATCATTGATTACGGCGTGAAATTAGACATTGTGGATAAGAGCGGGGCATGGCTTA
GCTACCAGGATAAAAAGCTAGGGCAAGGCCGAGAAAACGCTAAAGCCCTACTGAAAGAAGATAAAGCCCTAGCGAATGAA
ATCACTCTTAAGATTAAAGAGAGTATTGGCTCTAATGAAGAGATCATGCCCTTACCCGATGAGCCTTTAGAAGAAATGGA
ATAA

Domains

Predicted by InterProScan.

• recA bacterial DNA recombination protein (RecA_N) (9-271)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Helicobacter pylori strain NCTC11637	98.559	100	0.986
recA	Helicobacter pylori 26695	98.559	100	0.986
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	78.049	94.524	0.738
recA	Neisseria gonorrhoeae MS11	66.154	93.66	0.62
recA	Staphylococcus aureus strain ATCC 12600	63.05	98.271	0.62
recA	Neisseria gonorrhoeae strain FA1090	66.154	93.66	0.62
recA	Acinetobacter nosocomialis M2	62.573	98.559	0.617
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	63.554	95.677	0.608
recA	Bacillus subtilis subsp. subtilis str. 168	64.615	93.66	0.605
recA	Acinetobacter baumannii D1279779	63.609	94.236	0.599
recA	Acinetobacter baylyi ADP1	63.303	94.236	0.597
recA	Ralstonia pseudosolanacearum GMI1000	61.607	96.83	0.597
recA	Vibrio cholerae strain A1552	60.417	96.83	0.585
recA	Vibrio cholerae O1 biovar El Tor strain E7946	60.417	96.83	0.585
recA	Pseudomonas stutzeri DSM 10701	59.357	98.559	0.585
recA	Glaesserella parasuis strain SC1401	59.756	94.524	0.565
recA	Streptococcus pneumoniae R6	55.271	100	0.559
recA	Streptococcus pneumoniae R36A	55.271	100	0.559
recA	Streptococcus pneumoniae Rx1	55.271	100	0.559
recA	Streptococcus pneumoniae D39	55.271	100	0.559
recA	Streptococcus pneumoniae TIGR4	55.271	100	0.559
recA	Latilactobacillus sakei subsp. sakei 23K	54.062	100	0.556
recA	Streptococcus pyogenes NZ131	56.97	95.101	0.542
recA	Lactococcus lactis subsp. cremoris KW2	57.143	94.813	0.542
recA	Streptococcus mitis NCTC 12261	56.839	94.813	0.539
recA	Streptococcus mitis SK321	56.839	94.813	0.539
recA	Streptococcus thermophilus LMG 18311	56.061	95.101	0.533
recA	Streptococcus thermophilus LMD-9	56.061	95.101	0.533
recA	Streptococcus mutans UA159	55.389	96.254	0.533
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	55.828	93.948	0.524