Detailed information NTG0033980

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: UMN179_RS05150
• Genome accession: NC_015460
• Coordinates: 1096316..1097383 (-)
• Length: 355 a.a.
• NCBI ID: WP_013745832.1
• Uniprot ID: A0A0A2XV52
• Organism: Gallibacterium anatis UMN179
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1091316..1102383

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
UMN179_RS13300	-	1091482..1092375 (-)	894	WP_413540467.1	sigma 54-interacting transcriptional regulator	-
UMN179_RS13775	-	1092718..1093059 (-)	342	Protein_1000	ACT domain-containing protein	-
UMN179_RS05130 (UMN179_01014)	yjjG	1093141..1093818 (-)	678	WP_013745828.1	pyrimidine 5'-nucleotidase	-
UMN179_RS05135 (UMN179_01015)	dusC	1093808..1094752 (-)	945	WP_013745829.1	tRNA dihydrouridine(16) synthase DusC	-
UMN179_RS05140 (UMN179_01016)	djlA	1094759..1095631 (-)	873	WP_013745830.1	co-chaperone DjlA	-
UMN179_RS05145 (UMN179_01017)	recX	1095715..1096158 (-)	444	WP_013745831.1	recombination regulator RecX	-
UMN179_RS05150 (UMN179_01018)	recA	1096316..1097383 (-)	1068	WP_013745832.1	recombinase RecA	Machinery gene
UMN179_RS05155 (UMN179_01019)	mutS	1097592..1100177 (+)	2586	WP_013745833.1	DNA mismatch repair protein MutS	-
UMN179_RS05160 (UMN179_01020)	argF	1100205..1101206 (+)	1002	WP_013745834.1	ornithine carbamoyltransferase	-
UMN179_RS05165 (UMN179_01021)	-	1101257..1101646 (+)	390	WP_013745835.1	RidA family protein	-

Sequence

Protein

• Length: 355 a.a.
• Molecular weight: 38335.66 Da
• Isoelectric Point: 4.7539

>NTDB_id=33980 UMN179_RS05150 WP_013745832.1 1096316..1097383(-) (recA) [Gallibacterium anatis UMN179]
MTTNNEDKERALAAALGQIEKQFGKGSIMRLGDTQTLDVEAVSTGSLALDVALGIGGLPMGRIVEIFGPESSGKTTLTLS
VIAQAQKEGKTCAFIDAEHALDPIYASKLGVDVQSLLVSQPDNGEQALEICDALVRSGAVDVIIIDSVAALTPKAEIEGD
MGDSHMGLQARLMSQALRKLTGHIKTANCLVVFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRTGSITDGDEVI
GNETRVKVVKNKVAAPFRQAEFQILYGEGISKNGELIELGVKHKLLNKSGAWYSYNDEKIGQGRTNAMKWLAEHPEVAAE
LERKLREELLSNPEQLLVADDTEKQPEDDALNFGE

Nucleotide

• Length: 1068 bp

>NTDB_id=33980 UMN179_RS05150 WP_013745832.1 1096316..1097383(-) (recA) [Gallibacterium anatis UMN179]
ATGACAACAAACAATGAAGATAAAGAAAGAGCATTGGCAGCAGCATTAGGGCAAATTGAAAAACAATTCGGTAAAGGTTC
AATTATGCGCCTTGGTGATACACAAACATTGGATGTGGAAGCGGTTTCTACCGGTTCGTTGGCATTAGATGTGGCGTTAG
GTATCGGTGGTTTGCCAATGGGGCGCATCGTTGAGATTTTTGGGCCTGAATCTTCCGGTAAAACCACATTAACTTTATCT
GTGATTGCGCAAGCACAAAAAGAGGGTAAAACCTGTGCCTTTATTGATGCGGAACACGCATTGGATCCTATTTATGCCTC
TAAATTAGGGGTTGATGTACAATCACTTTTAGTTTCGCAACCGGATAACGGCGAACAGGCGTTGGAAATTTGTGATGCTT
TAGTACGTTCCGGAGCGGTGGATGTCATTATTATTGACTCTGTAGCAGCATTAACACCGAAAGCGGAAATTGAGGGTGAT
ATGGGAGATTCTCATATGGGGTTACAGGCTCGTTTAATGTCTCAAGCATTGCGTAAACTTACCGGTCATATCAAAACAGC
AAACTGTTTAGTGGTATTTATTAACCAAATTCGTATGAAAATTGGTGTTATGTTTGGTAATCCAGAAACAACAACCGGTG
GTAATGCCTTAAAATTCTATGCTTCAGTGCGTTTGGATATTCGCCGCACAGGCTCAATTACTGATGGCGATGAAGTAATT
GGTAACGAAACCAGAGTTAAAGTGGTGAAAAATAAAGTTGCCGCGCCATTTAGACAAGCAGAATTCCAAATTCTTTACGG
AGAAGGTATTTCGAAAAACGGTGAATTAATCGAATTGGGCGTGAAACATAAATTGCTTAATAAATCAGGTGCTTGGTATT
CCTACAATGATGAAAAGATTGGTCAAGGTCGTACCAATGCAATGAAGTGGCTTGCCGAACATCCGGAGGTGGCTGCCGAG
TTGGAACGTAAATTACGTGAAGAGTTGCTTTCCAATCCGGAGCAGTTATTAGTTGCGGATGATACAGAAAAACAACCGGA
AGATGACGCATTAAATTTCGGTGAATAA

Domains

Predicted by InterProScan.

• recA bacterial DNA recombination protein (RecA_N) (10-271)

3D structure

• AlphaFold DB: A0A0A2XV52

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Vibrio cholerae strain A1552	74.286	98.592	0.732
recA	Vibrio cholerae O1 biovar El Tor strain E7946	74.286	98.592	0.732
recA	Glaesserella parasuis strain SC1401	74.286	98.592	0.732
recA	Pseudomonas stutzeri DSM 10701	73.824	95.775	0.707
recA	Acinetobacter baylyi ADP1	69.186	96.901	0.67
recA	Neisseria gonorrhoeae MS11	73.684	90.986	0.67
recA	Neisseria gonorrhoeae strain FA1090	73.684	90.986	0.67
recA	Acinetobacter nosocomialis M2	68.895	96.901	0.668
recA	Acinetobacter baumannii D1279779	68.513	96.62	0.662
recA	Ralstonia pseudosolanacearum GMI1000	74.286	88.732	0.659
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	64.072	94.085	0.603
recA	Helicobacter pylori 26695	61.834	95.211	0.589
recA	Helicobacter pylori strain NCTC11637	61.834	95.211	0.589
recA	Streptococcus pneumoniae R6	59.249	97.465	0.577
recA	Streptococcus pneumoniae R36A	59.249	97.465	0.577
recA	Streptococcus pneumoniae Rx1	59.249	97.465	0.577
recA	Streptococcus pneumoniae D39	59.249	97.465	0.577
recA	Streptococcus pneumoniae TIGR4	59.249	97.465	0.577
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	62.883	91.831	0.577
recA	Bacillus subtilis subsp. subtilis str. 168	63.551	90.423	0.575
recA	Staphylococcus aureus strain ATCC 12600	62.154	91.549	0.569
recA	Streptococcus mitis SK321	61.42	91.268	0.561
recA	Latilactobacillus sakei subsp. sakei 23K	61.682	90.423	0.558
recA	Streptococcus mitis NCTC 12261	60.802	91.268	0.555
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	59.394	92.958	0.552
recA	Streptococcus pyogenes NZ131	60	91.549	0.549
recA	Streptococcus thermophilus LMG 18311	59.385	91.549	0.544
recA	Streptococcus thermophilus LMD-9	59.385	91.549	0.544
recA	Lactococcus lactis subsp. cremoris KW2	59.568	91.268	0.544
recA	Streptococcus mutans UA159	59.077	91.549	0.541