Detailed information NTG0032767

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: HPB8_RS06695
• Genome accession: NC_014256
• Coordinates: 1382577..1383620 (-)
• Length: 347 a.a.
• NCBI ID: WP_000952097.1
• Uniprot ID: Q1CV04
• Organism: Helicobacter pylori B8
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1377577..1388620

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HPB8_RS06665 (HPB8_1406)	-	1377818..1378927 (+)	1110	WP_000022418.1	glycosyltransferase family 8 protein	-
HPB8_RS06670 (HPB8_1407)	-	1378932..1379888 (-)	957	WP_000952264.1	PDC sensor domain-containing protein	-
HPB8_RS06675 (HPB8_1408)	-	1379909..1380397 (-)	489	WP_001164308.1	shikimate kinase	-
HPB8_RS06680 (HPB8_1409)	-	1380402..1380998 (-)	597	WP_013195928.1	AMIN domain-containing protein	-
HPB8_RS06685 (HPB8_1410)	-	1381016..1381291 (-)	276	WP_000146222.1	hypothetical protein	-
HPB8_RS06690 (HPB8_1411)	eno	1381284..1382564 (-)	1281	WP_000955619.1	phosphopyruvate hydratase	-
HPB8_RS06695 (HPB8_1412)	recA	1382577..1383620 (-)	1044	WP_000952097.1	recombinase RecA	Machinery gene
HPB8_RS06700 (HPB8_1413)	-	1383719..1384582 (+)	864	WP_000626283.1	menaquinone biosynthesis family protein	-
HPB8_RS06705 (HPB8_1414)	-	1384579..1385346 (-)	768	WP_000506255.1	hypothetical protein	-
HPB8_RS06710 (HPB8_1415)	-	1385436..1386017 (-)	582	WP_000660400.1	hypothetical protein	-
HPB8_RS06715 (HPB8_1416)	-	1386029..1386613 (-)	585	WP_001222068.1	hypothetical protein	-
HPB8_RS06720 (HPB8_1417)	-	1386714..1386920 (-)	207	WP_000670506.1	DUF4006 family protein	-
HPB8_RS06725 (HPB8_1418)	ccoP	1386931..1387809 (-)	879	WP_000346888.1	cytochrome-c oxidase, cbb3-type subunit III	-
HPB8_RS06730 (HPB8_1419)	-	1387811..1388029 (-)	219	WP_002203649.1	cytochrome c oxidase, cbb3-type, CcoQ subunit	-

Sequence

Protein

• Length: 347 a.a.
• Molecular weight: 37654.39 Da
• Isoelectric Point: 5.5047

>NTDB_id=32767 HPB8_RS06695 WP_000952097.1 1382577..1383620(-) (recA) [Helicobacter pylori B8]
MAIDEDKQKAISLAIKQIDKVFGKGALVRLGDKQVEKIDAISTGSLGLDLALGIGGVPKGRIIEIYGPESSGKTTLSLHI
IAECQKNGGVCAFIDAEHALDVHYAKRLGVDTENLLVSQPDTGEQALEILETITRSGGIDLVVVDSVAALTPKAEIDGDM
GDQHVGLQARLMSHALRKITGVLHKMNTTLIFINQIRMKIGMMGYGSPETTTGGNALKFYASVRIDIRRIAALKQNEQHI
GNRAKAKVVKNKVAPPFREAEFDIMFGEGISKEGEIIDYGVKLDIVDKSGAWLSYQDKKLGQGRENAKALLKEDKALADE
ITLKIKESIGSNEEIMPLPDEPLEEME

Nucleotide

• Length: 1044 bp

>NTDB_id=32767 HPB8_RS06695 WP_000952097.1 1382577..1383620(-) (recA) [Helicobacter pylori B8]
ATGGCAATAGATGAAGACAAACAAAAAGCGATTTCTTTAGCGATCAAACAAATTGATAAGGTTTTTGGTAAGGGGGCGTT
GGTGCGCCTTGGGGATAAGCAAGTAGAAAAGATTGACGCTATTTCTACAGGCTCGTTAGGGTTGGATCTGGCCTTAGGGA
TTGGGGGCGTTCCAAAAGGTAGGATCATTGAAATTTATGGGCCAGAGTCAAGCGGAAAGACCACTCTAAGCTTGCATATT
ATTGCAGAATGCCAAAAAAATGGCGGCGTGTGCGCGTTCATTGACGCTGAGCATGCCCTAGATGTGCATTACGCTAAGAG
ATTGGGCGTGGATACGGAAAATCTACTCGTTTCCCAACCTGATACAGGCGAGCAAGCTTTAGAGATTTTAGAAACGATCA
CAAGAAGCGGAGGGATTGATTTGGTGGTGGTGGATTCTGTGGCGGCTCTTACGCCTAAAGCAGAGATTGATGGGGATATG
GGCGATCAGCATGTGGGCTTGCAAGCAAGGCTTATGAGCCATGCGTTAAGAAAAATCACCGGTGTCTTGCACAAGATGAA
CACTACTTTAATCTTTATCAATCAAATCAGGATGAAGATTGGCATGATGGGTTATGGGAGTCCAGAGACCACAACCGGAG
GTAACGCTTTGAAATTCTATGCGAGCGTTAGGATTGATATTAGAAGGATTGCGGCTTTAAAACAAAACGAACAGCATATC
GGTAACAGGGCTAAAGCCAAAGTGGTTAAAAATAAAGTCGCTCCGCCCTTTAGAGAAGCGGAATTTGACATCATGTTTGG
GGAGGGGATTTCTAAAGAGGGCGAAATCATTGATTATGGCGTGAAATTAGACATTGTGGATAAGAGTGGGGCATGGCTTA
GCTACCAGGATAAAAAGCTAGGGCAAGGCAGAGAAAACGCTAAAGCCTTACTGAAAGAAGATAAAGCCCTAGCGGATGAA
ATCACTCTTAAGATTAAAGAGAGTATTGGCTCTAATGAAGAGATCATGCCCTTACCGGATGAGCCTTTAGAAGAAATGGA
ATAA

Domains

Predicted by InterProScan.

• recA bacterial DNA recombination protein (RecA_N) (9-271)

3D structure

• AlphaFold DB: Q1CV04

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Helicobacter pylori strain NCTC11637	100	100	1
recA	Helicobacter pylori 26695	99.424	100	0.994
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	78.963	94.524	0.746
recA	Neisseria gonorrhoeae MS11	66.769	93.66	0.625
recA	Neisseria gonorrhoeae strain FA1090	66.769	93.66	0.625
recA	Staphylococcus aureus strain ATCC 12600	63.636	98.271	0.625
recA	Acinetobacter nosocomialis M2	63.158	98.559	0.622
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	64.458	95.677	0.617
recA	Bacillus subtilis subsp. subtilis str. 168	65.231	93.66	0.611
recA	Acinetobacter baumannii D1279779	64.22	94.236	0.605
recA	Acinetobacter baylyi ADP1	63.914	94.236	0.602
recA	Ralstonia pseudosolanacearum GMI1000	61.905	96.83	0.599
recA	Vibrio cholerae strain A1552	61.31	96.83	0.594
recA	Vibrio cholerae O1 biovar El Tor strain E7946	61.31	96.83	0.594
recA	Pseudomonas stutzeri DSM 10701	60.234	98.559	0.594
recA	Glaesserella parasuis strain SC1401	60.671	94.524	0.573
recA	Streptococcus pneumoniae R6	56.125	100	0.568
recA	Streptococcus pneumoniae R36A	56.125	100	0.568
recA	Streptococcus pneumoniae Rx1	56.125	100	0.568
recA	Streptococcus pneumoniae D39	56.125	100	0.568
recA	Streptococcus pneumoniae TIGR4	56.125	100	0.568
recA	Latilactobacillus sakei subsp. sakei 23K	54.902	100	0.565
recA	Lactococcus lactis subsp. cremoris KW2	58.055	94.813	0.55
recA	Streptococcus pyogenes NZ131	57.879	95.101	0.55
recA	Streptococcus mitis NCTC 12261	57.751	94.813	0.548
recA	Streptococcus mitis SK321	57.447	94.813	0.545
recA	Streptococcus mutans UA159	56.287	96.254	0.542
recA	Streptococcus thermophilus LMD-9	56.667	95.101	0.539
recA	Streptococcus thermophilus LMG 18311	56.667	95.101	0.539
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	56.442	93.948	0.53