Detailed information NTG0298586

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: DOM24_RS13135
• Genome accession: NZ_CP030031
• Coordinates: 2779693..2779857 (-)
• Length: 54 a.a.
• NCBI ID: WP_111282483.1
• Uniprot ID: -
• Organism: Acinetobacter radioresistens strain LH6
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2774693..2784857

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DOM24_RS13110 (DOM24_13110)	rpoZ	2775139..2775420 (+)	282	WP_005024277.1	DNA-directed RNA polymerase subunit omega	-
DOM24_RS13115 (DOM24_13115)	-	2775625..2777724 (+)	2100	WP_111282481.1	bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase	-
DOM24_RS13120 (DOM24_13120)	-	2777813..2778196 (+)	384	WP_005024272.1	RidA family protein	-
DOM24_RS13125 (DOM24_13125)	-	2778411..2778605 (+)	195	WP_005018142.1	bacterioferritin-associated ferredoxin	-
DOM24_RS13130 (DOM24_13130)	bfr	2778912..2779376 (+)	465	WP_005405243.1	bacterioferritin	-
DOM24_RS13135 (DOM24_13135)	pilA	2779693..2779857 (-)	165	WP_111282483.1	prepilin-type N-terminal cleavage/methylation domain-containing protein	Machinery gene
DOM24_RS13140 (DOM24_13140)	-	2780144..2781256 (+)	1113	WP_111282485.1	UDP-N-acetylglucosamine 2-epimerase	-
DOM24_RS13145 (DOM24_13145)	-	2781277..2782380 (+)	1104	WP_111282487.1	glycosyltransferase family 4 protein	-
DOM24_RS13150 (DOM24_13150)	-	2782377..2783468 (+)	1092	WP_111282489.1	glycosyltransferase	-
DOM24_RS13155 (DOM24_13155)	-	2783468..2784499 (+)	1032	WP_111282491.1	bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG	-

Sequence

Protein

• Length: 54 a.a.
• Molecular weight: 5880.01 Da
• Isoelectric Point: 5.5272

>NTDB_id=298586 DOM24_RS13135 WP_111282483.1 2779693..2779857(-) (pilA) [Acinetobacter radioresistens strain LH6]
MQKGFTLIELMIVLTIIGLLAVTAIPVSQNYVTHSQVSEALSMVNAYKSDLITL

Nucleotide

• Length: 165 bp

>NTDB_id=298586 DOM24_RS13135 WP_111282483.1 2779693..2779857(-) (pilA) [Acinetobacter radioresistens strain LH6]
ATGCAAAAGGGCTTCACTTTGATTGAGCTGATGATTGTTTTGACAATCATTGGTCTTCTAGCTGTAACTGCTATTCCAGT
TTCTCAAAACTATGTGACTCACTCTCAAGTTTCGGAGGCTTTAAGTATGGTCAACGCATATAAGAGTGATTTAATCACGC
TTTAG

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (2-24)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilE	Neisseria elongata subsp. glycolytica ATCC 29315	60.784	94.444	0.574
pilA	Pseudomonas aeruginosa PAK	62.5	88.889	0.556
pilA	Acinetobacter nosocomialis M2	57.692	96.296	0.556
pilA	Vibrio parahaemolyticus RIMD 2210633	64.444	83.333	0.537
pilA	Haemophilus influenzae 86-028NP	54.902	94.444	0.519
pilA	Haemophilus influenzae Rd KW20	54.902	94.444	0.519
pilA	Acinetobacter baumannii strain A118	58.333	88.889	0.519
pilA	Vibrio cholerae C6706	54	92.593	0.5
pilA	Vibrio cholerae strain A1552	54	92.593	0.5
pilA	Vibrio cholerae O1 biovar El Tor strain E7946	54	92.593	0.5
pilE	Neisseria gonorrhoeae MS11	55.102	90.741	0.5
pilE	Neisseria gonorrhoeae strain FA1090	55.102	90.741	0.5
pilA/pilAI	Pseudomonas stutzeri DSM 10701	54.167	88.889	0.481
comP	Acinetobacter baylyi ADP1	54.167	88.889	0.481
pilA2	Legionella pneumophila str. Paris	55.319	87.037	0.481
pilA2	Legionella pneumophila strain ERS1305867	55.319	87.037	0.481
pilA	Ralstonia pseudosolanacearum GMI1000	53.061	90.741	0.481
pilA	Glaesserella parasuis strain SC1401	50.98	94.444	0.481
pilA/pilA1	Eikenella corrodens VA1	49.02	94.444	0.463
comF	Acinetobacter baylyi ADP1	54.545	81.481	0.444
pilA/pilAII	Pseudomonas stutzeri DSM 10701	48.936	87.037	0.426
pilA	Vibrio campbellii strain DS40M4	57.895	70.37	0.407
pilA/pilA1	Synechocystis sp. PCC 6803	46.667	83.333	0.389
pilX	Neisseria meningitidis 8013	52.632	70.37	0.37
pilL	Neisseria gonorrhoeae MS11	52.632	70.37	0.37