Detailed information NTG0296502

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: EQH31_RS09380
• Genome accession: NZ_CP035249
• Coordinates: 1827162..1828328 (-)
• Length: 388 a.a.
• NCBI ID: WP_001085462.1
• Uniprot ID: P0A451
• Organism: Streptococcus pneumoniae strain TVO_1901938
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 1822162..1833328

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EQH31_RS09355 (EQH31_09925)	-	1822561..1822767 (-)	207	WP_000366093.1	hypothetical protein	-
EQH31_RS09360 (EQH31_09930)	-	1822754..1822915 (-)	162	WP_001055999.1	helix-turn-helix domain-containing protein	-
EQH31_RS09365 (EQH31_09935)	lytA	1823280..1824236 (-)	957	WP_000405233.1	N-acetylmuramoyl-L-alanine amidase LytA	-
EQH31_RS09370 (EQH31_09940)	-	1824612..1825964 (-)	1353	WP_000364180.1	MATE family efflux transporter	-
EQH31_RS09375 (EQH31_09950)	-	1826020..1826834 (+)	815	Protein_1856	IS5-like element IS1515 family transposase	-
EQH31_RS09380 (EQH31_09960)	recA	1827162..1828328 (-)	1167	WP_001085462.1	recombinase RecA	Machinery gene
EQH31_RS09385 (EQH31_09965)	cinA	1828383..1829639 (-)	1257	WP_000642703.1	competence/damage-inducible protein A	Machinery gene
EQH31_RS09390 (EQH31_09970)	brpA	1829723..1830739 (-)	1017	WP_000239285.1	biofilm formation/cell division transcriptional regulator BrpA	-
EQH31_RS09395 (EQH31_09975)	-	1830747..1831265 (-)	519	WP_000455537.1	GNAT family N-acetyltransferase	-
EQH31_RS09400 (EQH31_09980)	tsaE	1831255..1831698 (-)	444	WP_000288232.1	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE	-
EQH31_RS09405 (EQH31_09985)	comM	1831784..1832404 (-)	621	WP_000839908.1	hypothetical protein	Regulator

Sequence

Protein

• Length: 388 a.a.
• Molecular weight: 41949.78 Da
• Isoelectric Point: 4.8403

>NTDB_id=296502 EQH31_RS09380 WP_001085462.1 1827162..1828328(-) (recA) [Streptococcus pneumoniae strain TVO_1901938]
MAKKPKKLEEISKKFGAEREKALNDALKLIEKDFGKGSIMRLGERAEQKVQVMSSGSLALDIALGSGGYPKGRIIEIYGP
ESSGKTTVALHAVAQAQKEGGIAAFIDAEHALDPAYAAALGVNIDELLLSQPDSGEQGLEIAGKLIDSGAVDLVVVDSVA
ALVPRAEIDGDIGDSHVGLQARMMSQAMRKLGASINKTKTIAIFINQLREKVGVMFGNPETTPGGRALKFYASVRLDVRG
NTQIKGTGDQKETNVGKETKIKVVKNKVAPPFKEAVVEIMYGEGISKTGELLKIASDLDIIKKAGAWYSYKDEKIGQGSE
NAKKYLAEHPEIFDEIDKQVRSKFGLIDGEEVSEQDTENKKDEPKKEEAVNEEVPLDLGDELEIEIEE

Nucleotide

• Length: 1167 bp

>NTDB_id=296502 EQH31_RS09380 WP_001085462.1 1827162..1828328(-) (recA) [Streptococcus pneumoniae strain TVO_1901938]
ATGGCGAAAAAACCAAAAAAATTAGAAGAAATTTCAAAAAAATTTGGGGCAGAACGTGAAAAGGCCTTGAATGACGCTCT
TAAATTGATTGAGAAAGACTTTGGTAAAGGATCAATCATGCGTTTGGGTGAACGTGCGGAGCAAAAGGTGCAAGTGATGA
GCTCAGGTTCTTTAGCTCTTGACATTGCCCTTGGCTCAGGTGGTTATCCTAAGGGACGTATCATCGAAATCTATGGCCCA
GAGTCATCTGGTAAGACAACGGTTGCCCTTCATGCAGTTGCACAAGCGCAAAAAGAAGGTGGGATTGCTGCTTTTATCGA
TGCGGAACATGCCCTTGATCCAGCTTATGCTGCGGCCCTTGGTGTCAATATTGACGAATTGCTCTTGTCTCAACCAGACT
CAGGAGAGCAAGGTCTTGAGATTGCGGGAAAATTGATTGACTCAGGTGCAGTTGATCTTGTCGTAGTCGACTCAGTTGCT
GCCCTTGTTCCTCGTGCGGAAATTGATGGAGATATCGGAGATAGCCATGTTGGTTTGCAGGCTCGTATGATGAGCCAGGC
CATGCGTAAACTTGGCGCCTCTATCAATAAAACCAAAACAATTGCCATTTTTATCAACCAATTGCGTGAAAAAGTTGGAG
TGATGTTTGGAAATCCAGAAACAACACCGGGCGGACGTGCTTTGAAATTCTATGCTTCAGTCCGCTTGGATGTTCGTGGT
AATACACAAATTAAGGGAACTGGTGACCAAAAAGAAACCAATGTCGGTAAAGAAACTAAGATTAAGGTTGTAAAAAATAA
GGTAGCTCCACCGTTTAAGGAAGCCGTAGTTGAAATTATGTACGGAGAAGGAATTTCTAAGACTGGTGAGCTTTTGAAGA
TTGCAAGCGATTTGGATATTATCAAAAAAGCAGGGGCTTGGTATTCTTACAAAGATGAAAAAATTGGGCAAGGTTCTGAG
AATGCTAAGAAATACTTGGCAGAGCACCCAGAAATCTTTGATGAAATTGATAAGCAAGTCCGTTCTAAATTTGGCTTGAT
TGATGGAGAAGAAGTTTCAGAACAAGATACTGAAAACAAAAAAGATGAGCCAAAGAAAGAAGAAGCAGTGAATGAAGAAG
TTCCGCTTGACTTAGGCGATGAACTTGAAATCGAAATTGAAGAATAA

Domains

Predicted by InterProScan.

• recA bacterial DNA recombination protein (RecA_N) (21-286)

3D structure

• AlphaFold DB: P0A451

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Streptococcus pneumoniae R36A	100	100	1
recA	Streptococcus pneumoniae Rx1	100	100	1
recA	Streptococcus pneumoniae D39	100	100	1
recA	Streptococcus pneumoniae R6	100	100	1
recA	Streptococcus pneumoniae TIGR4	100	100	1
recA	Streptococcus mitis NCTC 12261	94.072	100	0.941
recA	Streptococcus mitis SK321	93.557	100	0.936
recA	Streptococcus thermophilus LMG 18311	84.715	99.485	0.843
recA	Streptococcus thermophilus LMD-9	84.935	99.227	0.843
recA	Streptococcus mutans UA159	83.204	99.742	0.83
recA	Streptococcus pyogenes NZ131	90.725	88.918	0.807
recA	Lactococcus lactis subsp. cremoris KW2	78.409	90.722	0.711
recA	Latilactobacillus sakei subsp. sakei 23K	67.919	89.175	0.606
recA	Bacillus subtilis subsp. subtilis str. 168	68.788	85.052	0.585
recA	Staphylococcus aureus strain ATCC 12600	64.943	89.691	0.582
recA	Glaesserella parasuis strain SC1401	57.641	96.134	0.554
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	64.706	83.247	0.539
recA	Acinetobacter nosocomialis M2	59.827	89.175	0.534
recA	Neisseria gonorrhoeae MS11	60.177	87.371	0.526
recA	Neisseria gonorrhoeae strain FA1090	60.177	87.371	0.526
recA	Vibrio cholerae strain A1552	62.848	83.247	0.523
recA	Vibrio cholerae O1 biovar El Tor strain E7946	62.848	83.247	0.523
recA	Acinetobacter baumannii D1279779	61.963	84.021	0.521
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	60.725	85.309	0.518
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	58.824	87.629	0.515
recA	Acinetobacter baylyi ADP1	61.35	84.021	0.515
recA	Helicobacter pylori strain NCTC11637	56.125	90.464	0.508
recA	Helicobacter pylori 26695	56.125	90.464	0.508
recA	Pseudomonas stutzeri DSM 10701	59.509	84.021	0.5
recA	Ralstonia pseudosolanacearum GMI1000	59.937	81.701	0.49