Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | C8J_RS05285 | Genome accession | NC_009839 |
| Coordinates | 1027709..1028011 (+) | Length | 100 a.a. |
| NCBI ID | WP_002877750.1 | Uniprot ID | - |
| Organism | Campylobacter jejuni subsp. jejuni 81116 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1022709..1033011
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C8J_RS05260 (C8J_1013) | rpsR | 1023071..1023331 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| C8J_RS05265 (C8J_1014) | lon | 1023392..1025767 (-) | 2376 | WP_012006726.1 | endopeptidase La | - |
| C8J_RS05270 (C8J_1015) | - | 1025784..1026431 (-) | 648 | WP_012006727.1 | outer membrane protein assembly factor BamD | - |
| C8J_RS05275 (C8J_1016) | fliW | 1026592..1026981 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| C8J_RS05280 (C8J_1017) | proC | 1026981..1027712 (+) | 732 | WP_002859150.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| C8J_RS05285 (C8J_1018) | ctsT | 1027709..1028011 (+) | 303 | WP_002877750.1 | hypothetical protein | Machinery gene |
| C8J_RS05290 (C8J_1019) | - | 1028008..1028670 (+) | 663 | WP_012006728.1 | hypothetical protein | - |
| C8J_RS05295 (C8J_1020) | - | 1028667..1029119 (+) | 453 | WP_002869049.1 | hypothetical protein | - |
| C8J_RS05300 (C8J_1021) | hemD | 1029116..1029745 (-) | 630 | WP_002856298.1 | uroporphyrinogen-III synthase | - |
| C8J_RS05305 (C8J_1022) | thiE | 1029723..1030355 (-) | 633 | WP_002856400.1 | thiamine phosphate synthase | - |
| C8J_RS05310 (C8J_1023) | thiD | 1030345..1031157 (-) | 813 | WP_012006730.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| C8J_RS05315 (C8J_1024) | - | 1031154..1031840 (-) | 687 | WP_002869046.1 | 3-methyladenine DNA glycosylase | - |
| C8J_RS05320 (C8J_1025) | - | 1031837..1032598 (-) | 762 | WP_002856328.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12138.20 Da Isoelectric Point: 7.0039
>NTDB_id=29227 C8J_RS05285 WP_002877750.1 1027709..1028011(+) (ctsT) [Campylobacter jejuni subsp. jejuni 81116]
MKKAFILIESISAITIISLIFIGIFYHYTQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFINDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYHYTQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFINDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=29227 C8J_RS05285 WP_002877750.1 1027709..1028011(+) (ctsT) [Campylobacter jejuni subsp. jejuni 81116]
ATGAAAAAGGCTTTCATACTTATAGAAAGTATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATCA
CTATACTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCCATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTATTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGTGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGTATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATCA
CTATACTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCCATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTATTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGTGTTTATTTTAAAGAATGA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
98 |
100 |
0.98 |