Detailed information NTG0028595

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: HPG27_RS00775
• Genome accession: NC_011333
• Coordinates: 159012..160055 (+)
• Length: 347 a.a.
• NCBI ID: WP_000952106.1
• Uniprot ID: B5Z9S8
• Organism: Helicobacter pylori G27
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 154012..165055

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HPG27_RS00740 (HPG27_133)	-	154595..154813 (+)	219	WP_001864022.1	cytochrome c oxidase, cbb3-type, CcoQ subunit	-
HPG27_RS00745 (HPG27_134)	ccoP	154815..155693 (+)	879	WP_000346872.1	cytochrome-c oxidase, cbb3-type subunit III	-
HPG27_RS00750 (HPG27_135)	-	155704..155910 (+)	207	WP_000670506.1	DUF4006 family protein	-
HPG27_RS00755 (HPG27_136)	-	156011..156604 (+)	594	WP_000677514.1	hypothetical protein	-
HPG27_RS00760 (HPG27_137)	-	156617..157197 (+)	581	Protein_140	hypothetical protein	-
HPG27_RS00765 (HPG27_138)	-	157286..158053 (+)	768	WP_000506294.1	hypothetical protein	-
HPG27_RS00770 (HPG27_139)	-	158050..158913 (-)	864	WP_000626310.1	menaquinone biosynthesis family protein	-
HPG27_RS00775 (HPG27_140)	recA	159012..160055 (+)	1044	WP_000952106.1	recombinase RecA	Machinery gene
HPG27_RS00780 (HPG27_141)	eno	160067..161347 (+)	1281	WP_000955660.1	phosphopyruvate hydratase	-
HPG27_RS00785	-	161340..161615 (+)	276	WP_000146212.1	hypothetical protein	-
HPG27_RS00790 (HPG27_143)	-	161632..162228 (+)	597	WP_012552358.1	AMIN domain-containing protein	-
HPG27_RS00795 (HPG27_144)	-	162233..162721 (+)	489	WP_001164286.1	shikimate kinase	-
HPG27_RS00800 (HPG27_145)	-	162742..163698 (+)	957	WP_000952268.1	PDC sensor domain-containing protein	-
HPG27_RS00805 (HPG27_146)	-	163695..164798 (-)	1104	WP_000022408.1	glycosyltransferase family 8 protein	-

Sequence

Protein

• Length: 347 a.a.
• Molecular weight: 37669.40 Da
• Isoelectric Point: 5.7156

>NTDB_id=28595 HPG27_RS00775 WP_000952106.1 159012..160055(+) (recA) [Helicobacter pylori G27]
MAIDEDKQKAISLAIKQIDKVFGKGALVRLGDKQVEKIDAISTGSLGLDLALGIGGVPKGRIIEIYGPESSGKTTLSLHI
IAECQKNGGVCAFIDAEHALDVHYAKRLGVDTQNLLVSQPDTGEQALEILETITRSGGIDLVVVDSVAALTPKAEIDGDM
GDQHVGLQARLMSHALRKITGVLHKMNTTLIFINQIRMKIGMMGYGSPETTTGGNALKFYASVRIDIRRIASLKQNEQHI
GNRAKAKVVKNKVAPPFREAEFDIMFGEGISKEGEIIDYGVKLDIVDKSGAWLSYQDKKLGQGRENAKALLKEDKALADE
ITLKIKESIGSNEEIMPLPDEPLEEME

Nucleotide

• Length: 1044 bp

>NTDB_id=28595 HPG27_RS00775 WP_000952106.1 159012..160055(+) (recA) [Helicobacter pylori G27]
ATGGCAATAGATGAAGACAAACAAAAAGCGATTTCTTTAGCGATCAAACAAATTGATAAGGTTTTTGGTAAGGGGGCGTT
GGTACGCCTTGGGGATAAGCAAGTAGAAAAGATTGACGCTATTTCTACAGGCTCGTTAGGATTGGATCTGGCTTTAGGGA
TTGGGGGCGTTCCAAAGGGTAGGATCATTGAAATTTATGGGCCAGAGTCAAGCGGGAAGACCACTCTAAGCTTGCATATT
ATTGCAGAATGCCAAAAAAATGGCGGCGTGTGCGCGTTCATTGACGCTGAGCATGCCTTAGATGTGCATTATGCTAAGAG
ATTGGGCGTGGATACGCAAAATCTACTCGTTTCCCAACCTGATACAGGCGAGCAAGCTTTAGAAATTTTAGAAACGATCA
CCAGAAGCGGGGGGATTGATTTAGTGGTGGTGGATTCTGTGGCGGCTCTTACGCCTAAAGCGGAGATTGATGGGGATATG
GGCGATCAGCATGTGGGCTTGCAAGCAAGGCTTATGAGCCATGCGTTAAGAAAAATCACCGGTGTCTTGCACAAGATGAA
CACTACTTTAATCTTTATCAATCAAATTAGGATGAAGATTGGCATGATGGGTTATGGGAGTCCAGAGACCACAACCGGAG
GTAACGCTTTAAAATTCTATGCGAGCGTTAGGATTGATATTAGAAGAATCGCCTCCCTCAAACAAAACGAACAGCATATT
GGCAACAGGGCTAAAGCCAAAGTGGTTAAAAATAAAGTCGCTCCGCCCTTTAGGGAAGCGGAATTTGACATCATGTTTGG
GGAGGGGATTTCTAAAGAGGGCGAAATCATTGACTATGGCGTGAAATTAGACATTGTGGATAAGAGTGGGGCATGGCTTA
GCTACCAGGATAAAAAGCTAGGGCAAGGCAGAGAAAACGCTAAAGCCTTGCTGAAAGAAGATAAAGCCCTAGCGGATGAA
ATCACTCTTAAGATTAAAGAGAGTATTGGCTCTAATGAAGAGATCATGCCCTTACCGGATGAGCCTTTAGAAGAAATGGA
ATAA

Domains

Predicted by InterProScan.

• recA bacterial DNA recombination protein (RecA_N) (9-271)

3D structure

• AlphaFold DB: B5Z9S8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Helicobacter pylori strain NCTC11637	99.424	100	0.994
recA	Helicobacter pylori 26695	99.424	100	0.994
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	78.963	94.524	0.746
recA	Neisseria gonorrhoeae MS11	66.769	93.66	0.625
recA	Neisseria gonorrhoeae strain FA1090	66.769	93.66	0.625
recA	Staphylococcus aureus strain ATCC 12600	63.636	98.271	0.625
recA	Acinetobacter nosocomialis M2	63.158	98.559	0.622
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	64.157	95.677	0.614
recA	Bacillus subtilis subsp. subtilis str. 168	64.923	93.66	0.608
recA	Acinetobacter baumannii D1279779	64.22	94.236	0.605
recA	Acinetobacter baylyi ADP1	63.914	94.236	0.602
recA	Ralstonia pseudosolanacearum GMI1000	62.202	96.83	0.602
recA	Pseudomonas stutzeri DSM 10701	59.942	98.559	0.591
recA	Vibrio cholerae strain A1552	61.012	96.83	0.591
recA	Vibrio cholerae O1 biovar El Tor strain E7946	61.012	96.83	0.591
recA	Glaesserella parasuis strain SC1401	60.671	94.524	0.573
recA	Streptococcus pneumoniae R6	56.125	100	0.568
recA	Streptococcus pneumoniae R36A	56.125	100	0.568
recA	Streptococcus pneumoniae Rx1	56.125	100	0.568
recA	Streptococcus pneumoniae D39	56.125	100	0.568
recA	Streptococcus pneumoniae TIGR4	56.125	100	0.568
recA	Latilactobacillus sakei subsp. sakei 23K	54.902	100	0.565
recA	Lactococcus lactis subsp. cremoris KW2	58.055	94.813	0.55
recA	Streptococcus pyogenes NZ131	57.879	95.101	0.55
recA	Streptococcus mitis NCTC 12261	57.751	94.813	0.548
recA	Streptococcus mitis SK321	57.447	94.813	0.545
recA	Streptococcus mutans UA159	56.287	96.254	0.542
recA	Streptococcus thermophilus LMD-9	56.667	95.101	0.539
recA	Streptococcus thermophilus LMG 18311	56.667	95.101	0.539
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	56.442	93.948	0.53