Detailed information NTG0253002

Bioinformatically predicted

Overview

• Name: comEA
• Type: Machinery gene
• Locus tag: CSE15_RS19945
• Genome accession: NZ_CP024204
• Coordinates: 2303507..2303695 (-)
• Length: 62 a.a.
• NCBI ID: WP_232516851.1
• Uniprot ID: -
• Organism: Bacillus altitudinis strain P-10
• Function: dsDNA binding to the cell surface (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2298507..2308695

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CSE15_RS11945 (CSE15_11985)	rpsT	2298719..2298985 (+)	267	WP_008342485.1	30S ribosomal protein S20	-
CSE15_RS11950 (CSE15_11990)	holA	2299120..2300139 (-)	1020	WP_017358025.1	DNA polymerase III subunit delta	-
CSE15_RS11955 (CSE15_11995)	-	2300378..2300512 (+)	135	WP_008342491.1	YqzM family protein	-
CSE15_RS11960 (CSE15_12000)	-	2300552..2302879 (-)	2328	WP_099496616.1	DNA internalization-related competence protein ComEC/Rec2	-
CSE15_RS11965 (CSE15_12005)	-	2302872..2303441 (-)	570	WP_099496617.1	ComE operon protein 2	-
CSE15_RS19945	comEA	2303507..2303695 (-)	189	WP_232516851.1	ComEA family DNA-binding protein	Machinery gene
CSE15_RS11970 (CSE15_12010)	-	2303692..2304135 (-)	444	WP_232516855.1	SLBB domain-containing protein	-
CSE15_RS11975 (CSE15_12015)	comER	2304226..2305074 (+)	849	WP_048003098.1	late competence protein ComER	-
CSE15_RS11980 (CSE15_12020)	-	2305123..2305866 (-)	744	WP_052320629.1	class I SAM-dependent DNA methyltransferase	-
CSE15_RS11985 (CSE15_12025)	rsfS	2305863..2306219 (-)	357	WP_008342502.1	ribosome silencing factor	-
CSE15_RS11990 (CSE15_12030)	yqeK	2306232..2306795 (-)	564	WP_017358029.1	bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK	-
CSE15_RS11995 (CSE15_12035)	-	2306785..2307354 (-)	570	WP_045034392.1	nicotinate-nucleotide adenylyltransferase	-
CSE15_RS12000 (CSE15_12040)	yhbY	2307368..2307658 (-)	291	WP_008342507.1	ribosome assembly RNA-binding protein YhbY	-
CSE15_RS12005 (CSE15_12045)	aroE	2307652..2308494 (-)	843	WP_052320630.1	shikimate dehydrogenase	-

Sequence

Protein

• Length: 62 a.a.
• Molecular weight: 6942.78 Da
• Isoelectric Point: 4.6828

>NTDB_id=253002 CSE15_RS19945 WP_232516851.1 2303507..2303695(-) (comEA) [Bacillus altitudinis strain P-10]
MNVNQADAAELQTINGIGPAKAEAIITYREEHGEFQQIEDLRNISGFGEKTIERLKNQLTVK

Nucleotide

• Length: 189 bp

>NTDB_id=253002 CSE15_RS19945 WP_232516851.1 2303507..2303695(-) (comEA) [Bacillus altitudinis strain P-10]
GTGAATGTCAATCAAGCTGATGCAGCGGAATTGCAGACCATTAACGGAATAGGCCCAGCCAAAGCGGAAGCCATCATTAC
GTATAGAGAAGAACATGGAGAATTTCAGCAAATTGAAGATTTACGGAATATTTCGGGTTTTGGAGAGAAGACCATTGAAC
GGCTGAAAAATCAACTGACGGTCAAGTAG

Domains

Predicted by InterproScan.

• Helix-hairpin-helix motif (HHH_3) (2-60)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comEA	Bacillus subtilis subsp. subtilis str. 168	58.065	100	0.581
comEA	Latilactobacillus sakei subsp. sakei 23K	57.377	98.387	0.565
comEA	Streptococcus thermophilus LMD-9	49.18	98.387	0.484
comEA	Lactococcus lactis subsp. cremoris KW2	49.18	98.387	0.484
comEA	Staphylococcus aureus N315	45.902	98.387	0.452
Cj0011c	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	45.902	98.387	0.452
comEA	Staphylococcus aureus MW2	45.902	98.387	0.452
comEA	Vibrio cholerae strain A1552	50.943	85.484	0.435
comEA	Vibrio cholerae C6706	50.943	85.484	0.435
comEA	Vibrio parahaemolyticus RIMD 2210633	47.273	88.71	0.419
comEA/celA/cilE	Streptococcus pneumoniae Rx1	42.623	98.387	0.419
comE	Neisseria gonorrhoeae MS11	42.623	98.387	0.419
comE	Neisseria gonorrhoeae MS11	42.623	98.387	0.419
comE	Neisseria gonorrhoeae MS11	42.623	98.387	0.419
comE	Neisseria gonorrhoeae MS11	42.623	98.387	0.419
comEA/celA/cilE	Streptococcus mitis NCTC 12261	42.623	98.387	0.419
comEA/celA/cilE	Streptococcus pneumoniae TIGR4	42.623	98.387	0.419
comEA/celA/cilE	Streptococcus pneumoniae D39	42.623	98.387	0.419
comEA/celA/cilE	Streptococcus pneumoniae R6	42.623	98.387	0.419
comEA/celA/cilE	Streptococcus mitis SK321	42.623	98.387	0.419
comE1/comEA	Haemophilus influenzae Rd KW20	43.333	96.774	0.419
comEA/comE1	Glaesserella parasuis strain SC1401	40.323	100	0.403
comEA	Vibrio campbellii strain DS40M4	45.455	88.71	0.403
comEA	Acinetobacter baylyi ADP1	40.984	98.387	0.403
comA	Synechocystis sp. PCC 6803	40	96.774	0.387
comEA	Acinetobacter baumannii D1279779	37.705	98.387	0.371
comEA	Legionella pneumophila str. Paris	38.333	96.774	0.371
comEA	Legionella pneumophila strain ERS1305867	38.333	96.774	0.371