Detailed information    

insolico Bioinformatically predicted

Overview

Name   recA   Type   Machinery gene
Locus tag   ACLV7W_RS01690 Genome accession   NZ_OZ217346
Coordinates   348232..349398 (+) Length   388 a.a.
NCBI ID   WP_064276728.1    Uniprot ID   A0A178K586
Organism   Streptococcus mitis isolate S. mitis D22     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 343232..354398
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACLV7W_RS01660 (SMID22_03380) ndk 343536..343958 (+) 423 WP_411865315.1 nucleoside-diphosphate kinase -
  ACLV7W_RS01665 (SMID22_03390) comM 344088..344720 (+) 633 WP_411865316.1 competence protein Regulator
  ACLV7W_RS01670 (SMID22_03400) tsaE 344816..345259 (+) 444 WP_411865317.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  ACLV7W_RS01675 (SMID22_03410) - 345249..345767 (+) 519 WP_411865318.1 GNAT family N-acetyltransferase -
  ACLV7W_RS01680 (SMID22_03420) brpA 345775..346827 (+) 1053 WP_411865319.1 biofilm formation/cell division transcriptional regulator BrpA -
  ACLV7W_RS01685 (SMID22_03430) cinA 346921..348177 (+) 1257 WP_411865320.1 competence/damage-inducible protein A Machinery gene
  ACLV7W_RS01690 (SMID22_03440) recA 348232..349398 (+) 1167 WP_064276728.1 recombinase RecA Machinery gene
  ACLV7W_RS01695 (SMID22_03450) - 349500..350870 (+) 1371 WP_411865321.1 MATE family efflux transporter -
  ACLV7W_RS01700 (SMID22_03460) - 350967..351683 (+) 717 WP_411865322.1 YebC/PmpR family DNA-binding transcriptional regulator -
  ACLV7W_RS01705 (SMID22_03470) - 351861..352322 (+) 462 WP_411865323.1 MarR family winged helix-turn-helix transcriptional regulator -
  ACLV7W_RS01710 (SMID22_03480) rcrP 352306..354075 (+) 1770 WP_411865324.1 ABC transporter ATP-binding protein Regulator

Sequence

Protein


Download         Length: 388 a.a.        Molecular weight: 41675.37 Da        Isoelectric Point: 4.7095

>NTDB_id=1170425 ACLV7W_RS01690 WP_064276728.1 348232..349398(+) (recA) [Streptococcus mitis isolate S. mitis D22]
MAKKPKKLDEISKKFGAEREKALNDALKLIEKDFGKGSIMRLGERAEQKVQVMSSGSLALDIALGSGGYPKGRIIEIYGP
ESSGKTTVALHAVAQAQKEGGIAAFIDAEHALDPAYAAALGVNIDELLLSQPDSGEQGLEIAGKLIDSGAVDLVVVDSVA
ALVPRAEIDGDIGDSHVGLQARMMSQAMRKLGASINKTKTIAIFINQLREKVGVMFGNPETTPGGRALKFYASVRLDVRG
STQIKGTGDQKDTNVGKETKIKVVKNKVAPPFKEAFVEIMYGEGISKTGELLKVASDLDIIKKAGAWYSYKDEKIGQGSE
NAKKYLADNPEVFDEIDHQVRVQFGLIDGEEASVEGVETKKDDVVQADSVNEEVTLDLGDELEIEIEE

Nucleotide


Download         Length: 1167 bp        

>NTDB_id=1170425 ACLV7W_RS01690 WP_064276728.1 348232..349398(+) (recA) [Streptococcus mitis isolate S. mitis D22]
ATGGCGAAAAAACCAAAAAAATTAGATGAAATTTCAAAAAAATTCGGGGCAGAACGTGAAAAAGCCTTGAATGACGCTCT
TAAATTGATTGAGAAAGACTTTGGTAAGGGTTCAATCATGCGTTTGGGTGAGCGTGCAGAGCAAAAGGTGCAAGTGATGA
GCTCAGGTTCCTTGGCTCTTGATATTGCCCTTGGTTCAGGTGGTTATCCTAAGGGACGTATCATCGAAATCTATGGGCCA
GAGTCATCTGGTAAGACAACGGTTGCCCTTCATGCAGTTGCACAAGCGCAAAAAGAAGGTGGGATTGCAGCCTTTATCGA
TGCGGAGCATGCCCTTGATCCAGCTTATGCTGCGGCTCTTGGGGTCAATATTGACGAATTGCTCTTGTCTCAACCAGACT
CAGGAGAGCAAGGTCTTGAGATTGCAGGAAAATTGATTGACTCAGGTGCAGTTGACCTTGTCGTAGTCGACTCCGTTGCG
GCCCTTGTCCCTCGTGCGGAAATTGATGGAGATATCGGAGATAGCCACGTTGGTTTGCAGGCTCGTATGATGAGTCAGGC
CATGCGTAAACTTGGTGCTTCTATCAATAAAACCAAAACAATTGCCATCTTCATCAACCAATTGCGTGAAAAAGTTGGGG
TCATGTTTGGAAATCCAGAAACAACTCCTGGTGGACGTGCCTTGAAATTCTACGCATCAGTCCGTTTGGATGTTCGTGGA
AGCACGCAAATCAAGGGAACTGGTGACCAAAAAGACACCAACGTCGGTAAAGAAACCAAGATCAAGGTCGTGAAAAACAA
GGTGGCTCCACCATTTAAAGAAGCCTTCGTTGAAATCATGTACGGAGAAGGAATTTCTAAGACCGGTGAGCTTTTGAAGG
TTGCAAGCGATTTGGATATCATCAAAAAAGCAGGGGCTTGGTATTCTTATAAGGATGAGAAAATCGGGCAAGGTTCTGAA
AATGCTAAGAAATACTTGGCAGATAACCCAGAAGTCTTTGATGAGATTGATCATCAAGTCCGTGTTCAATTTGGTTTGAT
TGATGGAGAAGAAGCTTCTGTAGAAGGTGTTGAAACTAAAAAAGATGACGTAGTTCAAGCAGATTCTGTGAATGAAGAAG
TGACACTTGACCTAGGCGACGAGCTTGAAATCGAAATTGAAGAATAA

Domains

Predicted by InterproScan.

recA bacterial DNA recombination protein (RecA)

(21-286)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A178K586

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recA Streptococcus mitis SK321

97.165

100

0.972
  recA Streptococcus mitis NCTC 12261

96.649

100

0.966
  recA Streptococcus pneumoniae Rx1

93.557

100

0.936
  recA Streptococcus pneumoniae D39

93.557

100

0.936
  recA Streptococcus pneumoniae R6

93.557

100

0.936
  recA Streptococcus pneumoniae TIGR4

93.557

100

0.936
  recA Streptococcus mutans UA159

83.636

99.227

0.83
  recA Streptococcus pyogenes NZ131

90.435

88.918

0.804
  recA Lactococcus lactis subsp. cremoris KW2

78.409

90.722

0.711
  recA Latilactobacillus sakei subsp. sakei 23K

66.479

91.495

0.608
  recA Bacillus subtilis subsp. subtilis str. 168

68.485

85.052

0.582
  recA Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539

64.396

83.247

0.536
  recA Glaesserella parasuis strain SC1401

60.882

87.629

0.534
  recA Riemerella anatipestifer ATCC 11845 = DSM 15868

62.5

84.536

0.528
  recA Acinetobacter baumannii D1279779

60.534

86.856

0.526
  recA Vibrio cholerae strain A1552

61.92

83.247

0.515
  recA Vibrio cholerae O1 biovar El Tor strain E7946

61.92

83.247

0.515
  recA Acinetobacter baylyi ADP1

61.043

84.021

0.513
  recA Neisseria gonorrhoeae MS11

61.321

81.959

0.503
  recA Neisseria gonorrhoeae MS11

61.321

81.959

0.503
  recA Neisseria gonorrhoeae strain FA1090

61.321

81.959

0.503
  recA Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819

58.663

84.794

0.497
  recA Pseudomonas stutzeri DSM 10701

58.589

84.021

0.492
  recA Helicobacter pylori 26695

57.751

84.794

0.49
  recA Helicobacter pylori strain NCTC11637

57.751

84.794

0.49
  recA Ralstonia pseudosolanacearum GMI1000

59.621

81.701

0.487

Multiple sequence alignment