Detailed information    

insolico Bioinformatically predicted

Overview

Name   comM   Type   Regulator
Locus tag   ACLV7W_RS01665 Genome accession   NZ_OZ217346
Coordinates   344088..344720 (+) Length   210 a.a.
NCBI ID   WP_411865316.1    Uniprot ID   -
Organism   Streptococcus mitis isolate S. mitis D22     
Function   fratricide immunity (predicted from homology)   
Competence regulation

Genomic Context

Location: 339088..349720
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACLV7W_RS01655 (SMID22_03370) rpoC 339644..343321 (+) 3678 WP_000228741.1 DNA-directed RNA polymerase subunit beta' -
  ACLV7W_RS01660 (SMID22_03380) ndk 343536..343958 (+) 423 WP_411865315.1 nucleoside-diphosphate kinase -
  ACLV7W_RS01665 (SMID22_03390) comM 344088..344720 (+) 633 WP_411865316.1 competence protein Regulator
  ACLV7W_RS01670 (SMID22_03400) tsaE 344816..345259 (+) 444 WP_411865317.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  ACLV7W_RS01675 (SMID22_03410) - 345249..345767 (+) 519 WP_411865318.1 GNAT family N-acetyltransferase -
  ACLV7W_RS01680 (SMID22_03420) brpA 345775..346827 (+) 1053 WP_411865319.1 biofilm formation/cell division transcriptional regulator BrpA -
  ACLV7W_RS01685 (SMID22_03430) cinA 346921..348177 (+) 1257 WP_411865320.1 competence/damage-inducible protein A Machinery gene
  ACLV7W_RS01690 (SMID22_03440) recA 348232..349398 (+) 1167 WP_064276728.1 recombinase RecA Machinery gene

Sequence

Protein


Download         Length: 210 a.a.        Molecular weight: 24083.29 Da        Isoelectric Point: 9.2991

>NTDB_id=1170423 ACLV7W_RS01665 WP_411865316.1 344088..344720(+) (comM) [Streptococcus mitis isolate S. mitis D22]
MMEKMKKQIRVLLLLTFFGLSSCSCLSLSTWALMLNQNCFYYLVGMLLLASIGAGLNYYRGQGNQHYSVFKEDKQQFLYS
LLLLVNILGLALIVIEHILAGNTSVEGFVEAFLPSFFFLFGIDLLVFLPIQKYVNGLKKILGKKEICFISGLAILIFLRN
PWMLLSMTFYIALGMLFLGLLVPKVIRWEVSFYSHLMRDILLVVFLLFLF

Nucleotide


Download         Length: 633 bp        

>NTDB_id=1170423 ACLV7W_RS01665 WP_411865316.1 344088..344720(+) (comM) [Streptococcus mitis isolate S. mitis D22]
ATGATGGAAAAAATGAAAAAGCAAATTCGTGTTTTGTTATTGCTGACGTTTTTTGGTCTTAGTAGCTGTTCTTGTTTAAG
TTTATCGACTTGGGCCTTGATGTTAAATCAAAACTGCTTCTATTATTTAGTTGGCATGCTGCTCCTTGCCAGTATTGGTG
CAGGATTAAACTACTATAGAGGGCAGGGAAATCAACATTATTCAGTTTTTAAGGAAGATAAGCAACAATTCTTGTATAGT
CTGTTGCTCTTAGTAAACATTTTGGGTTTAGCCTTAATTGTCATAGAACATATCCTTGCAGGAAATACATCCGTAGAAGG
GTTTGTGGAAGCCTTTCTACCGAGTTTCTTTTTCTTATTTGGTATTGATTTGTTAGTTTTTCTACCAATTCAGAAGTATG
TAAATGGATTGAAAAAGATTTTAGGAAAGAAGGAAATCTGTTTTATTAGTGGACTAGCTATTCTAATCTTTCTCAGAAAT
CCTTGGATGCTATTGTCCATGACCTTTTATATTGCCTTGGGAATGCTATTTCTAGGACTGTTGGTGCCAAAAGTTATTCG
CTGGGAAGTTTCATTTTACAGTCATTTGATGAGAGATATCTTGTTAGTTGTCTTCTTGCTGTTTCTATTTTAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comM Streptococcus mitis NCTC 12261

98.571

100

0.986
  comM Streptococcus mitis SK321

93.97

94.762

0.89
  comM Streptococcus pneumoniae D39

39.024

97.619

0.381
  comM Streptococcus pneumoniae R6

39.024

97.619

0.381
  comM Streptococcus pneumoniae TIGR4

39.024

97.619

0.381

Multiple sequence alignment