Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   ACLV7W_RS01710 Genome accession   NZ_OZ217346
Coordinates   352306..354075 (+) Length   589 a.a.
NCBI ID   WP_411865324.1    Uniprot ID   -
Organism   Streptococcus mitis isolate S. mitis D22     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 347306..359075
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACLV7W_RS01690 (SMID22_03440) recA 348232..349398 (+) 1167 WP_064276728.1 recombinase RecA Machinery gene
  ACLV7W_RS01695 (SMID22_03450) - 349500..350870 (+) 1371 WP_411865321.1 MATE family efflux transporter -
  ACLV7W_RS01700 (SMID22_03460) - 350967..351683 (+) 717 WP_411865322.1 YebC/PmpR family DNA-binding transcriptional regulator -
  ACLV7W_RS01705 (SMID22_03470) - 351861..352322 (+) 462 WP_411865323.1 MarR family winged helix-turn-helix transcriptional regulator -
  ACLV7W_RS01710 (SMID22_03480) rcrP 352306..354075 (+) 1770 WP_411865324.1 ABC transporter ATP-binding protein Regulator
  ACLV7W_RS01715 (SMID22_03490) rcrQ 354065..355825 (+) 1761 WP_411865325.1 ABC transporter ATP-binding protein Regulator
  ACLV7W_RS01720 (SMID22_03500) - 356063..356566 (+) 504 WP_411865326.1 phosphatase PAP2 family protein -
  ACLV7W_RS01725 (SMID22_03510) - 356680..357126 (+) 447 WP_411865327.1 LytTR family DNA-binding domain-containing protein -
  ACLV7W_RS01730 (SMID22_03520) - 357131..357805 (+) 675 WP_153208836.1 LiaF transmembrane domain-containing protein -
  ACLV7W_RS01735 (SMID22_03530) rpmB 357911..358099 (+) 189 WP_001140948.1 50S ribosomal protein L28 -
  ACLV7W_RS01740 (SMID22_03540) - 358255..358620 (+) 366 WP_000216437.1 Asp23/Gls24 family envelope stress response protein -

Sequence

Protein


Download         Length: 589 a.a.        Molecular weight: 65462.95 Da        Isoelectric Point: 6.3875

>NTDB_id=1170426 ACLV7W_RS01710 WP_411865324.1 352306..354075(+) (rcrP) [Streptococcus mitis isolate S. mitis D22]
MKKLAKRISRKEWGMILLAILFTCFSVYLELEVPTYISKITDLLGSQGTNLDELWQPAGMMVGMSFFAFLSAVAVGLFAS
RVAASYTSRLRSDIFNRVLDYSQTEIKKFSIPSLLTRTTNDITQVQMLITMGLQVVTRGPIMAIWAIGKILGHSEYWLWA
VLVAVIVNVLMTTVLMTLAFPKQSLIQSLTDKLNSITRESLTGIRVVRAYNAEKYQDEKFAVANDELTRLNLFVNRLMAI
LNPIMMGISSGLSVAIYWIGAYVINDAAPTARLPLFSDMVVFMSYAMQVVMGFLLMGALFIVLPRTMVSAKRINQVLDLH
SSIQNPAQVQLADENLKGQVEFKDVTFRYAANSEAVIEHVSFRAEAGQTVAFIGSTGSGKSTLVNLIPRFYDVSAGEILV
DGVNVQDYGLEDLRNKVGYIPQKAVLFSGDVKDNLDFGRSQETPLSEQAMWQALELAQSKNFIEDKEAGLESEVAQGGTN
FSGGQRQRLAIARALARKPEILIFDDSFSALDYKTDRVLRQELAEKTKSMTKLIVAQRISTIMDADLILVLDQGKVVGQG
THKELLATNEVYQEIAYSQLSKEELEHGK

Nucleotide


Download         Length: 1770 bp        

>NTDB_id=1170426 ACLV7W_RS01710 WP_411865324.1 352306..354075(+) (rcrP) [Streptococcus mitis isolate S. mitis D22]
ATGAAGAAATTAGCTAAGCGAATTAGTAGAAAAGAATGGGGGATGATTTTACTAGCTATTCTCTTTACTTGCTTTTCGGT
CTATCTAGAGTTGGAAGTTCCGACCTATATCTCGAAAATTACGGATTTGCTAGGAAGTCAAGGAACCAACTTGGATGAGT
TATGGCAACCAGCAGGTATGATGGTCGGAATGTCTTTTTTTGCCTTCTTGTCCGCAGTCGCAGTTGGATTATTTGCATCC
AGAGTGGCCGCTTCCTATACTAGTAGGTTAAGAAGCGACATTTTTAACCGAGTTTTGGATTACTCGCAGACAGAGATTAA
GAAATTCTCTATTCCCAGTCTCCTAACTCGTACCACTAATGATATTACTCAAGTTCAGATGCTGATCACCATGGGCTTGC
AAGTGGTTACGCGTGGTCCAATTATGGCTATCTGGGCTATCGGGAAGATTTTAGGTCATTCAGAATACTGGCTCTGGGCT
GTACTTGTGGCAGTGATTGTCAATGTTTTGATGACAACAGTTTTGATGACGCTAGCCTTTCCAAAACAGTCCTTGATTCA
GAGTCTGACTGATAAACTGAATAGCATTACTCGTGAAAGTTTAACAGGTATTCGCGTTGTTCGTGCCTACAATGCTGAAA
AGTACCAAGATGAAAAATTTGCAGTAGCAAATGATGAATTGACACGCTTGAATTTGTTTGTTAACCGTCTTATGGCTATT
TTGAATCCCATCATGATGGGGATTTCAAGTGGTTTGAGTGTGGCGATTTACTGGATTGGGGCCTATGTAATCAACGATGC
TGCTCCGACAGCTCGTCTGCCTCTCTTTAGTGACATGGTTGTTTTCATGTCTTATGCCATGCAGGTTGTCATGGGCTTCC
TTCTCATGGGGGCGCTCTTCATCGTTCTTCCTCGAACCATGGTCTCTGCCAAACGGATTAATCAGGTTCTAGATTTGCAT
TCTTCTATCCAAAATCCTGCTCAAGTGCAGTTGGCTGATGAAAATCTCAAAGGTCAGGTCGAATTTAAGGATGTGACCTT
TCGCTATGCGGCAAATTCAGAGGCAGTTATTGAGCATGTTAGCTTTAGAGCAGAAGCTGGCCAAACAGTGGCCTTTATCG
GCTCAACGGGTTCTGGTAAATCAACTCTAGTCAATCTGATTCCACGTTTCTATGACGTATCAGCAGGAGAAATTCTAGTG
GATGGTGTCAATGTTCAAGACTACGGTTTGGAAGATTTACGCAATAAGGTTGGCTATATTCCACAAAAAGCTGTACTCTT
TTCAGGTGATGTCAAGGACAATCTAGACTTTGGACGCAGCCAAGAAACACCGCTTAGTGAACAAGCCATGTGGCAAGCCT
TGGAATTGGCCCAGTCTAAGAACTTTATCGAAGACAAGGAAGCGGGCTTAGAGTCAGAAGTAGCCCAAGGAGGCACCAAC
TTCTCAGGTGGACAAAGACAGCGTCTGGCCATTGCGCGTGCCTTGGCTCGGAAGCCAGAAATCCTCATCTTTGATGACTC
CTTCTCAGCCTTGGATTACAAGACAGACCGTGTCCTACGCCAAGAGCTAGCAGAGAAAACAAAATCTATGACCAAGCTTA
TTGTCGCACAGCGTATTTCAACCATTATGGACGCAGATTTGATTTTGGTCTTGGATCAAGGAAAAGTAGTGGGACAAGGC
ACCCACAAGGAGCTTCTAGCTACCAACGAAGTTTACCAAGAAATTGCCTATTCACAATTATCGAAGGAGGAATTGGAACA
TGGAAAATAA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(358-507)

ABC transporter transmembrane region (ABC_membrane)

(17-292)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

66.389

100

0.677

Multiple sequence alignment