Detailed information NTG1091808

Bioinformatically predicted

Overview

• Name: comEA
• Type: Machinery gene
• Locus tag: ACLKMH_RS23075
• Genome accession: NZ_CP178826
• Coordinates: 4030102..4030251 (+)
• Length: 49 a.a.
• NCBI ID: WP_413700118.1
• Uniprot ID: -
• Organism: Psychromonas sp. KJ10-10
• Function: dsDNA binding (predicted from homology) DNA binding and uptake

Genomic Context

Location: 4025102..4035251

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACLKMH_RS23060 (ACLKMH_23060)	-	4025475..4026707 (-)	1233	Protein_4511	type II secretion system F family protein	-
ACLKMH_RS23065 (ACLKMH_23065)	pilB	4026850..4028542 (-)	1693	Protein_4512	type IV-A pilus assembly ATPase PilB	-
ACLKMH_RS23070 (ACLKMH_23070)	-	4028542..4028967 (-)	426	WP_413700117.1	pilin	-
ACLKMH_RS23075 (ACLKMH_23075)	comEA	4030102..4030251 (+)	150	WP_413700118.1	ComEA family DNA-binding protein	Machinery gene
ACLKMH_RS23080 (ACLKMH_23080)	glnS	4030385..4032040 (-)	1656	WP_413700119.1	glutamine--tRNA ligase	-
ACLKMH_RS23085 (ACLKMH_23085)	-	4032375..4032911 (-)	537	WP_413702451.1	glucose PTS transporter subunit EIIB	-
ACLKMH_RS23090 (ACLKMH_23090)	-	4032924..4033791 (-)	868	Protein_4517	PTS transporter subunit EIIC	-
ACLKMH_RS23095 (ACLKMH_23095)	-	4034076..4034792 (-)	717	WP_413700120.1	NRDE family protein	-

Sequence

Protein

• Length: 49 a.a.
• Molecular weight: 5369.22 Da
• Isoelectric Point: 9.6966

>NTDB_id=1091808 ACLKMH_RS23075 WP_413700118.1 4030102..4030251(+) (comEA) [Psychromonas sp. KJ10-10]
MIKGIGPSKAQAIVDYRNNYGKFNSTDELINVKGIGKGTLEKIEPFISL

Nucleotide

• Length: 150 bp

>NTDB_id=1091808 ACLKMH_RS23075 WP_413700118.1 4030102..4030251(+) (comEA) [Psychromonas sp. KJ10-10]
ATGATTAAAGGAATTGGCCCTAGTAAAGCTCAGGCAATTGTTGATTATCGTAACAATTATGGGAAATTTAACAGTACTGA
TGAACTTATTAATGTGAAGGGGATTGGTAAAGGTACTTTAGAAAAAATAGAACCATTTATTTCTCTATAA

Domains

Predicted by InterproScan.

• Helix-hairpin-helix motif (HHH_3) (2-47)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comEA	Vibrio parahaemolyticus RIMD 2210633	55.102	100	0.551
comEA	Acinetobacter baumannii D1279779	52.083	97.959	0.51
comEA	Vibrio campbellii strain DS40M4	48.98	100	0.49
comEA	Vibrio cholerae C6706	60	81.633	0.49
comEA	Vibrio cholerae strain A1552	60	81.633	0.49
comEA	Acinetobacter baumannii strain A118	50	97.959	0.49
comEA/comE1	Glaesserella parasuis strain SC1401	61.538	79.592	0.49
comEA	Acinetobacter baylyi ADP1	56.098	83.673	0.469
comE	Neisseria gonorrhoeae MS11	53.488	87.755	0.469
comE	Neisseria gonorrhoeae MS11	53.488	87.755	0.469
comE	Neisseria gonorrhoeae MS11	53.488	87.755	0.469
comE	Neisseria gonorrhoeae MS11	53.488	87.755	0.469
comE1/comEA	Haemophilus influenzae Rd KW20	53.659	83.673	0.449
comEA/celA/cilE	Streptococcus pneumoniae D39	44.898	100	0.449
comEA/celA/cilE	Streptococcus pneumoniae R6	44.898	100	0.449
comEA/celA/cilE	Streptococcus mitis SK321	44.898	100	0.449
comEA/celA/cilE	Streptococcus mitis NCTC 12261	44.898	100	0.449
comEA/celA/cilE	Streptococcus pneumoniae TIGR4	44.898	100	0.449
comEA/celA/cilE	Streptococcus pneumoniae Rx1	44.898	100	0.449
Cj0011c	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	45.833	97.959	0.449
comEA	Lactococcus lactis subsp. cremoris KW2	45.833	97.959	0.449
comEA	Streptococcus thermophilus LMD-9	50	85.714	0.429
comEA	Bacillus subtilis subsp. subtilis str. 168	43.75	97.959	0.429
comEA	Staphylococcus aureus N315	41.667	97.959	0.408
comEA	Staphylococcus aureus MW2	41.667	97.959	0.408
comEA	Legionella pneumophila strain ERS1305867	50	81.633	0.408
comEA	Legionella pneumophila str. Paris	50	81.633	0.408
comEA	Latilactobacillus sakei subsp. sakei 23K	43.478	93.878	0.408
comEA	Thermus thermophilus HB27	39.13	93.878	0.367