Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | R8622_RS05295 | Genome accession | NZ_AP028408 |
| Coordinates | 1020244..1020546 (+) | Length | 100 a.a. |
| NCBI ID | WP_002853046.1 | Uniprot ID | Q0P9H7 |
| Organism | Campylobacter jejuni strain IDH-11860 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1015244..1025546
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| R8622_RS05270 (I11860_10350) | rpsR | 1015606..1015866 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| R8622_RS05275 (I11860_10360) | lon | 1015927..1018302 (-) | 2376 | WP_002868636.1 | endopeptidase La | - |
| R8622_RS05280 (I11860_10370) | - | 1018319..1018966 (-) | 648 | WP_002860191.1 | outer membrane protein assembly factor BamD | - |
| R8622_RS05285 (I11860_10380) | fliW | 1019127..1019516 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| R8622_RS05290 (I11860_10390) | proC | 1019516..1020247 (+) | 732 | WP_002864259.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| R8622_RS05295 (I11860_10400) | ctsT | 1020244..1020546 (+) | 303 | WP_002853046.1 | type II secretion system protein | Machinery gene |
| R8622_RS05300 (I11860_10410) | - | 1020543..1021205 (+) | 663 | WP_002858296.1 | hypothetical protein | - |
| R8622_RS05305 (I11860_10420) | - | 1021202..1021654 (+) | 453 | WP_002859148.1 | hypothetical protein | - |
| R8622_RS05310 (I11860_10430) | hemD | 1021651..1022280 (-) | 630 | WP_002878794.1 | uroporphyrinogen-III synthase | - |
| R8622_RS05315 (I11860_10440) | thiE | 1022258..1022890 (-) | 633 | WP_002852670.1 | thiamine phosphate synthase | - |
| R8622_RS05320 (I11860_10450) | thiD | 1022880..1023692 (-) | 813 | WP_317648154.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| R8622_RS05325 (I11860_10460) | - | 1023689..1024375 (-) | 687 | WP_002858132.1 | endonuclease III domain-containing protein | - |
| R8622_RS05330 (I11860_10470) | - | 1024372..1025133 (-) | 762 | WP_002852748.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12162.27 Da Isoelectric Point: 6.2957
>NTDB_id=105571 R8622_RS05295 WP_002853046.1 1020244..1020546(+) (ctsT) [Campylobacter jejuni strain IDH-11860]
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=105571 R8622_RS05295 WP_002853046.1 1020244..1020546(+) (ctsT) [Campylobacter jejuni strain IDH-11860]
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
99 |
100 |
0.99 |