Detailed information NTG1007538

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: APEC5202_RS14405
• Genome accession: NZ_LR740758
• Coordinates: 2921675..2922736 (-)
• Length: 353 a.a.
• NCBI ID: WP_000963143.1
• Uniprot ID: P0A7G7
• Organism: Escherichia coli strain BEN5202 isolate laying hen 51 weeks old
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2916675..2927736

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
APEC5202_RS14390 (APEC5202_2834)	csrA	2917928..2918113 (-)	186	WP_000906486.1	carbon storage regulator CsrA	-
APEC5202_RS14395 (APEC5202_2835)	alaS	2918348..2920978 (-)	2631	WP_000047209.1	alanine--tRNA ligase	-
APEC5202_RS14400 (APEC5202_2837)	recX	2921106..2921606 (-)	501	WP_000140506.1	recombination regulator RecX	-
APEC5202_RS14405 (APEC5202_2838)	recA	2921675..2922736 (-)	1062	WP_000963143.1	recombinase RecA	Machinery gene
APEC5202_RS14410 (APEC5202_2839)	pncC	2922816..2923313 (-)	498	WP_000132237.1	nicotinamide-nucleotide amidase	-
APEC5202_RS14415 (APEC5202_2841)	mltB	2923458..2924543 (-)	1086	WP_000476837.1	lytic murein transglycosylase B	-
APEC5202_RS14420 (APEC5202_2842)	srlA	2924800..2925363 (+)	564	WP_000573324.1	PTS glucitol/sorbitol transporter subunit IIC	-
APEC5202_RS14425 (APEC5202_2843)	srlE	2925360..2926319 (+)	960	WP_000196936.1	PTS glucitol/sorbitol transporter subunit IIB	-
APEC5202_RS14430 (APEC5202_2844)	srlB	2926330..2926701 (+)	372	WP_000216203.1	PTS glucitol/sorbitol transporter subunit IIA	-
APEC5202_RS14435 (APEC5202_2845)	srlD	2926705..2927484 (+)	780	WP_001077351.1	sorbitol-6-phosphate dehydrogenase	-

Sequence

Protein

• Length: 353 a.a.
• Molecular weight: 37973.37 Da
• Isoelectric Point: 4.8171

>NTDB_id=1007538 APEC5202_RS14405 WP_000963143.1 2921675..2922736(-) (recA) [Escherichia coli strain BEN5202 isolate laying hen 51 weeks old]
MAIDENKQKALAAALGQIEKQFGKGSIMRLGEDRSMDVETISTGSLSLDIALGAGGLPMGRIVEIYGPESSGKTTLTLQV
IAAAQREGKTCAFIDAEHALDPIYARKLGVDIDNLLCSQPDTGEQALEICDALARSGAVDVIVVDSVAALTPKAEIEGEI
GDSHMGLAARMMSQAMRKLAGNLKQSNTLLIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRIGAVKEGENVVG
SETRVKVVKNKIAAPFKQAEFQILYGEGINFYGELVDLGVKEKLIEKAGAWYSYKGEKIGQGKANATAWLKDNPETAKEI
EKKVRELLLSNPNSTPDFSVDDSEGVAETNEDF

Nucleotide

• Length: 1062 bp

>NTDB_id=1007538 APEC5202_RS14405 WP_000963143.1 2921675..2922736(-) (recA) [Escherichia coli strain BEN5202 isolate laying hen 51 weeks old]
ATGGCTATCGACGAAAACAAACAGAAAGCGTTGGCGGCAGCACTGGGCCAGATTGAGAAACAATTTGGTAAAGGCTCCAT
CATGCGCCTGGGTGAAGACCGTTCCATGGATGTGGAAACCATCTCTACCGGTTCGCTTTCACTGGATATCGCGCTTGGGG
CAGGTGGTCTGCCGATGGGCCGTATCGTCGAAATCTACGGACCAGAATCTTCCGGTAAAACCACGCTGACGTTGCAGGTG
ATCGCCGCAGCGCAGCGCGAAGGTAAAACCTGTGCGTTTATCGATGCTGAACACGCGCTGGACCCAATCTACGCACGTAA
ACTGGGCGTTGATATCGACAACCTGCTGTGCTCCCAGCCGGATACCGGCGAGCAGGCACTGGAAATCTGTGACGCCCTGG
CACGTTCTGGCGCAGTAGACGTTATCGTCGTTGACTCCGTGGCGGCACTGACGCCGAAAGCGGAAATCGAAGGCGAAATC
GGCGACTCTCACATGGGCCTTGCGGCACGTATGATGAGCCAGGCGATGCGTAAGCTGGCGGGTAACCTGAAGCAGTCCAA
CACGCTGCTGATCTTCATCAACCAGATCCGTATGAAAATTGGTGTGATGTTCGGTAACCCGGAAACCACTACTGGTGGTA
ACGCGCTGAAATTCTACGCCTCTGTTCGTCTCGATATCCGTCGTATCGGCGCGGTGAAAGAGGGCGAAAACGTGGTGGGT
AGCGAAACCCGCGTGAAAGTGGTGAAGAACAAAATCGCTGCGCCGTTTAAACAGGCTGAATTCCAGATCCTCTACGGCGA
AGGTATCAACTTCTACGGCGAGCTGGTTGACCTGGGCGTGAAAGAGAAGCTTATCGAGAAAGCAGGCGCGTGGTACAGCT
ACAAAGGTGAGAAGATCGGTCAGGGTAAAGCGAATGCGACTGCCTGGCTGAAAGATAACCCGGAAACCGCGAAAGAGATC
GAGAAGAAAGTACGTGAGTTGCTGCTGAGCAACCCGAACTCAACGCCGGATTTCTCTGTAGATGACAGCGAAGGCGTAGC
AGAAACTAACGAAGATTTTTAA

Domains

Predicted by InterProScan.

• recA bacterial DNA recombination protein (RecA_N) (9-270)

3D structure

• AlphaFold DB: P0A7G7

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Vibrio cholerae strain A1552	84.29	93.768	0.79
recA	Vibrio cholerae O1 biovar El Tor strain E7946	84.29	93.768	0.79
recA	Pseudomonas stutzeri DSM 10701	74.184	95.467	0.708
recA	Acinetobacter baumannii D1279779	74.085	92.918	0.688
recA	Acinetobacter nosocomialis M2	73.78	92.918	0.686
recA	Acinetobacter baylyi ADP1	73.78	92.918	0.686
recA	Glaesserella parasuis strain SC1401	69.452	98.3	0.683
recA	Neisseria gonorrhoeae MS11	69.018	92.351	0.637
recA	Neisseria gonorrhoeae strain FA1090	69.018	92.351	0.637
recA	Ralstonia pseudosolanacearum GMI1000	70.159	89.235	0.626
recA	Streptococcus mitis NCTC 12261	60.286	99.15	0.598
recA	Streptococcus mitis SK321	60.286	99.15	0.598
recA	Helicobacter pylori strain NCTC11637	61.721	95.467	0.589
recA	Streptococcus thermophilus LMG 18311	58.263	100	0.589
recA	Helicobacter pylori 26695	61.424	95.467	0.586
recA	Streptococcus pneumoniae Rx1	63.467	91.501	0.581
recA	Streptococcus pneumoniae R36A	63.467	91.501	0.581
recA	Streptococcus pneumoniae D39	63.467	91.501	0.581
recA	Streptococcus pneumoniae R6	63.467	91.501	0.581
recA	Streptococcus pneumoniae TIGR4	63.467	91.501	0.581
recA	Staphylococcus aureus strain ATCC 12600	62.577	92.351	0.578
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	62.654	91.785	0.575
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	60.661	94.334	0.572
recA	Streptococcus thermophilus LMD-9	62.154	92.068	0.572
recA	Streptococcus pyogenes NZ131	62.154	92.068	0.572
recA	Streptococcus mutans UA159	62.154	92.068	0.572
recA	Bacillus subtilis subsp. subtilis str. 168	62.305	90.935	0.567
recA	Latilactobacillus sakei subsp. sakei 23K	61.538	92.068	0.567
recA	Lactococcus lactis subsp. cremoris KW2	61.61	91.501	0.564
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	61.059	90.935	0.555