Detailed information NTG1006549

Bioinformatically predicted

Overview

• Name: luxP
• Type: Regulator
• Locus tag: ABDM36_RS18640
• Genome accession: NZ_CP157385
• Coordinates: 1016407..1017501 (-)
• Length: 364 a.a.
• NCBI ID: WP_000823678.1
• Uniprot ID: Q9KLK6
• Organism: Vibrio cholerae C6706
• Function: autoinducer sensor (predicted from homology) Competence regulation

Genomic Context

Location: 1011407..1022501

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABDM36_RS18620	-	1011747..1012145 (+)	399	WP_000831416.1	YgiW/YdeI family stress tolerance OB fold protein	-
ABDM36_RS18625	-	1012397..1012915 (+)	519	WP_000914961.1	hypothetical protein	-
ABDM36_RS18630	-	1013159..1013824 (+)	666	WP_000268204.1	flagellar brake protein	-
ABDM36_RS18635	luxQ	1013816..1016389 (-)	2574	WP_001026306.1	quorum-sensing autoinducer 2 sensor kinase/phosphatase LuxQ	Regulator
ABDM36_RS18640	luxP	1016407..1017501 (-)	1095	WP_000823678.1	autoinducer 2-binding periplasmic protein LuxP	Regulator
ABDM36_RS18645	traF	1017713..1018873 (-)	1161	WP_001025860.1	conjugal transfer protein TraF	-
ABDM36_RS18650	-	1018975..1019280 (-)	306	WP_000429067.1	GIY-YIG nuclease family protein	-
ABDM36_RS18655	-	1019297..1019947 (-)	651	WP_001025631.1	YceH family protein	-
ABDM36_RS18660	-	1019989..1020186 (-)	198	WP_001246071.1	hypothetical protein	-
ABDM36_RS18665	-	1020374..1020694 (+)	321	WP_001089529.1	DUF496 family protein	-
ABDM36_RS18670	-	1020694..1020843 (+)	150	WP_000611732.1	hypothetical protein	-
ABDM36_RS18675	-	1021107..1021358 (+)	252	WP_001882582.1	YgjV family protein	-

Sequence

Protein

• Length: 364 a.a.
• Molecular weight: 41196.81 Da
• Isoelectric Point: 6.3129

>NTDB_id=1006549 ABDM36_RS18640 WP_000823678.1 1016407..1017501(-) (luxP) [Vibrio cholerae C6706]
MKRKLISPLFLIAALFSSTGQADSLKGYWHYDEFLAEFPEQRPISELFAQTVRDKPSALTVAQEQPVIISVVYPGQQISD
YWVRNIKAFEKRMDALGIRYQINQVFTRPNLDTRQQSVSLMEALKNKSDYLIFTLDTTRHRKFIEHVLHSSETKLILQNI
TTPVKDWQGKQPMMYIGFDHEYGAQLLAQYYQAHAPKKPYSVLYFSEGYISEARGDTFIQDMNAVHHFPLASSYYTKATE
QSGYEATLNIVKNNPEIGFIYACATDVALGAAQALKELNRQDILVNGWGGGSAELEALAKGELDVTVMRMNDDTGVAMAE
AIKWDLEGKSVPLVYSGDFEVVTKQDSAARIAELKARAFRYSDR

Nucleotide

• Length: 1095 bp

>NTDB_id=1006549 ABDM36_RS18640 WP_000823678.1 1016407..1017501(-) (luxP) [Vibrio cholerae C6706]
ATGAAAAGAAAGCTAATATCTCCGCTGTTTCTGATAGCAGCACTCTTCAGCTCAACTGGTCAAGCCGATTCATTAAAAGG
CTATTGGCATTATGATGAATTTCTTGCTGAGTTCCCTGAACAGCGGCCAATTTCCGAGCTTTTTGCTCAAACAGTTCGTG
ATAAACCGAGTGCGTTGACGGTGGCGCAAGAACAACCCGTCATTATTTCGGTGGTCTATCCCGGACAGCAAATTTCTGAC
TATTGGGTTCGCAACATCAAAGCGTTTGAAAAGCGAATGGATGCTTTGGGGATTCGCTATCAAATCAATCAGGTGTTTAC
TCGCCCGAATCTTGATACTCGCCAGCAGAGTGTTTCCTTGATGGAAGCGCTGAAAAATAAGAGCGACTATCTGATTTTTA
CCTTAGATACCACCCGTCACCGCAAATTCATTGAGCATGTGCTGCACTCCTCCGAAACGAAACTGATTTTGCAAAACATC
ACGACGCCAGTCAAAGATTGGCAAGGCAAGCAGCCCATGATGTACATCGGTTTTGATCATGAGTACGGTGCGCAATTATT
GGCGCAATATTACCAAGCACATGCTCCGAAAAAGCCGTACTCAGTACTTTATTTTTCCGAGGGGTATATCAGTGAAGCGC
GGGGAGACACCTTCATTCAAGATATGAACGCGGTGCACCATTTTCCGTTGGCTTCTTCCTATTACACCAAGGCAACCGAA
CAAAGTGGCTATGAAGCGACCCTAAACATCGTCAAGAATAATCCAGAAATTGGCTTTATTTACGCCTGTGCGACGGACGT
CGCTTTGGGAGCTGCGCAGGCACTGAAAGAGCTGAATCGACAAGATATTCTGGTCAATGGTTGGGGAGGCGGTTCGGCAG
AGCTTGAAGCGCTTGCCAAAGGAGAATTGGATGTCACTGTGATGCGTATGAATGACGATACGGGTGTGGCGATGGCTGAA
GCGATTAAATGGGATTTGGAAGGGAAATCCGTACCTTTGGTCTATTCAGGCGATTTTGAAGTGGTCACCAAACAAGATTC
AGCAGCACGTATTGCAGAACTGAAAGCTCGGGCTTTCCGTTATTCGGATCGTTAG

Domains

Predicted by InterproScan.

• Periplasmic binding protein domain (Peripla_BP_4) (69-323)

3D structure

• AlphaFold DB: Q9KLK6

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
luxP	Vibrio cholerae strain A1552	100	100	1