Detailed information NTG1003025

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: EL238_RS08130
• Genome accession: NZ_LR134507
• Coordinates: 1588292..1589323 (-)
• Length: 343 a.a.
• NCBI ID: WP_002851424.1
• Uniprot ID: Q0P7V6
• Organism: Campylobacter jejuni strain NCTC12851
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1583292..1594323

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EL238_RS08075 (NCTC12851_01647)	-	1583461..1583898 (-)	438	WP_002866839.1	DUF411 domain-containing protein	-
EL238_RS08080 (NCTC12851_01648)	-	1584178..1584621 (-)	444	WP_002866838.1	hypothetical protein	-
EL238_RS08110 (NCTC12851_01654)	-	1585279..1586127 (-)	849	WP_002866837.1	DNA ligase	-
EL238_RS08115 (NCTC12851_01655)	cgpA	1586127..1586789 (-)	663	WP_126393861.1	glycoprotein CgpA	-
EL238_RS08120 (NCTC12851_01656)	-	1586779..1586982 (-)	204	WP_002839177.1	hypothetical protein	-
EL238_RS08125 (NCTC12851_01657)	eno	1587048..1588292 (-)	1245	WP_002867528.1	phosphopyruvate hydratase	-
EL238_RS08130 (NCTC12851_01658)	recA	1588292..1589323 (-)	1032	WP_002851424.1	recombinase RecA	Machinery gene
EL238_RS08135 (NCTC12851_01659)	-	1589429..1590289 (+)	861	WP_002866835.1	menaquinone biosynthesis family protein	-
EL238_RS08140 (NCTC12851_01660)	fliQ	1590301..1590570 (+)	270	WP_002851290.1	flagellar biosynthesis protein FliQ	-
EL238_RS08145 (NCTC12851_01661)	murB	1590567..1591343 (+)	777	WP_002866834.1	UDP-N-acetylmuramate dehydrogenase	-
EL238_RS08150 (NCTC12851_01662)	-	1591367..1592137 (-)	771	WP_072238638.1	hypothetical protein	-
EL238_RS08155 (NCTC12851_01663)	cysQ	1592177..1592941 (-)	765	WP_052861474.1	3'(2'),5'-bisphosphate nucleotidase CysQ	-
EL238_RS08160 (NCTC12851_01664)	gltA	1593022..1594290 (-)	1269	WP_002851494.1	citrate synthase	-

Sequence

Protein

• Length: 343 a.a.
• Molecular weight: 37049.27 Da
• Isoelectric Point: 4.9784

>NTDB_id=1003025 EL238_RS08130 WP_002851424.1 1588292..1589323(-) (recA) [Campylobacter jejuni strain NCTC12851]
MDDNKRKSLDAALKSLDKTFGKGTILRLGDKEVEQIDSIGTGSVGLDLALGIGGVPKGRIIEIYGPESSGKTTLTLHIIA
ECQKAGGVCAFIDAEHALDVKYAKNLGVNTDDLYVSQPDFGEQALEIVETIARSGAVDLIVVDSVAALTPKAEIEGDMGD
QHVGLQARLMSQALRKLTGIVHKMNTTVIFINQIRMKIGAMGYGTPETTTGGNALKFYASVRLDVRKVATLKQNEEPIGN
RVKVKVVKNKVAPPFRQAEFDVMFGEGLSREGELIDYGVKLDIVDKSGAWFSYKDKKLGQGRENSKAFLKENPEIADEIT
KAIQNSMGIEGMISGSEDDEGEE

Nucleotide

• Length: 1032 bp

>NTDB_id=1003025 EL238_RS08130 WP_002851424.1 1588292..1589323(-) (recA) [Campylobacter jejuni strain NCTC12851]
ATGGATGATAATAAAAGAAAATCTCTAGACGCTGCCCTAAAAAGTTTAGATAAAACCTTTGGAAAAGGCACTATCTTAAG
ACTAGGGGATAAAGAAGTCGAGCAAATCGATAGCATAGGCACAGGTTCAGTTGGACTTGATCTTGCTTTAGGTATAGGCG
GTGTTCCAAAAGGAAGAATTATAGAAATTTATGGGCCTGAAAGTTCAGGTAAAACCACTCTAACTCTACACATTATCGCA
GAATGCCAAAAAGCAGGTGGAGTTTGTGCTTTTATTGATGCAGAGCACGCTCTTGATGTAAAATATGCTAAAAATTTAGG
TGTAAATACAGATGATTTGTATGTTTCTCAACCTGATTTTGGAGAGCAAGCCTTAGAAATTGTAGAAACTATAGCAAGAA
GTGGTGCAGTAGATCTTATTGTAGTAGATAGCGTTGCAGCACTTACCCCAAAAGCAGAAATTGAAGGCGATATGGGCGAT
CAACATGTAGGACTTCAAGCAAGACTTATGTCTCAAGCTCTAAGAAAACTTACAGGTATAGTTCATAAAATGAATACCAC
AGTAATTTTCATCAACCAAATTCGTATGAAAATCGGTGCTATGGGTTATGGTACTCCTGAAACCACAACAGGTGGAAATG
CATTAAAATTTTATGCTTCTGTGCGTTTAGATGTTAGAAAAGTAGCAACCTTAAAACAAAACGAAGAACCTATAGGAAAC
CGCGTTAAAGTAAAAGTAGTTAAAAATAAAGTTGCTCCTCCATTCAGACAAGCTGAATTTGATGTGATGTTTGGAGAGGG
TTTAAGTCGTGAAGGTGAATTGATCGATTATGGTGTAAAACTTGATATCGTAGATAAAAGTGGTGCGTGGTTTTCTTATA
AAGATAAAAAACTTGGACAAGGTAGAGAAAACTCAAAAGCTTTCTTAAAAGAAAACCCTGAAATTGCAGATGAAATCACA
AAAGCAATTCAAAATTCTATGGGAATAGAAGGTATGATCAGCGGTAGCGAAGATGACGAAGGAGAAGAATAA

Domains

Predicted by InterProScan.

• recA bacterial DNA recombination protein (RecA_N) (7-269)

3D structure

• AlphaFold DB: Q0P7V6

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	100	100	1
recA	Helicobacter pylori 26695	79.268	95.627	0.758
recA	Helicobacter pylori strain NCTC11637	78.963	95.627	0.755
recA	Neisseria gonorrhoeae strain FA1090	65.103	99.417	0.647
recA	Neisseria gonorrhoeae MS11	65.103	99.417	0.647
recA	Staphylococcus aureus strain ATCC 12600	64.897	98.834	0.641
recA	Acinetobacter nosocomialis M2	62.899	100	0.633
recA	Acinetobacter baylyi ADP1	62.974	100	0.63
recA	Acinetobacter baumannii D1279779	61.808	100	0.618
recA	Glaesserella parasuis strain SC1401	65.031	95.044	0.618
recA	Pseudomonas stutzeri DSM 10701	64.832	95.335	0.618
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	63.855	96.793	0.618
recA	Ralstonia pseudosolanacearum GMI1000	63.72	95.627	0.609
recA	Vibrio cholerae O1 biovar El Tor strain E7946	64.506	94.461	0.609
recA	Vibrio cholerae strain A1552	64.506	94.461	0.609
recA	Bacillus subtilis subsp. subtilis str. 168	63.914	95.335	0.609
recA	Streptococcus pneumoniae D39	58.824	99.125	0.583
recA	Streptococcus pneumoniae TIGR4	58.824	99.125	0.583
recA	Streptococcus pneumoniae R36A	58.824	99.125	0.583
recA	Streptococcus pneumoniae Rx1	58.824	99.125	0.583
recA	Streptococcus pneumoniae R6	58.824	99.125	0.583
recA	Streptococcus mitis SK321	57.647	99.125	0.571
recA	Streptococcus mitis NCTC 12261	58.967	95.918	0.566
recA	Streptococcus pyogenes NZ131	58.788	96.21	0.566
recA	Streptococcus thermophilus LMD-9	56.891	99.417	0.566
recA	Streptococcus thermophilus LMG 18311	56.598	99.417	0.563
recA	Latilactobacillus sakei subsp. sakei 23K	59.021	95.335	0.563
recA	Streptococcus mutans UA159	57.704	96.501	0.557
recA	Lactococcus lactis subsp. cremoris KW2	57.447	95.918	0.551
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	59.177	92.128	0.545