Pseudomonas aeruginosa UCBPP-PA14

• Map 1
• T6SS gene clusters 3
• Effectors 6
• Immunity proteins 1
• Recipient susceptibility factors 0
• Regulators 14
• Accessory proteins 0

• NC_008463 (chromosome)

NC_008463 (chromosome)
 

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Experimental investigation has been performed.
Bioinformatics investigation has been performed

T6SS ID	Type	Organism	Replicon (Accession)	Location	Function
T6SS00150	i3	Pseudomonas aeruginosa UCBPP-PA14	chromosome (NC_008463)	82730..121410	anti-eukaryotic; anti-bacterial; effector translocation; virulence
T6SS00152	i1	Pseudomonas aeruginosa UCBPP-PA14	chromosome (NC_008463)	3806993..3840213	anti-eukaryotic; anti-bacterial; virulence
T6SS00151	i4a	Pseudomonas aeruginosa UCBPP-PA14	chromosome (NC_008463)	3011563..3044708	anti-eukaryotic; virulence

Experimental investigation has been performed.
Bioinformatics investigation has been performed

Regulator ID	Locus tag (Gene)	Related T6SS	Regulator type	Regulatory pathway	Organism	Replicon (Accession)	Coordinates (Strand)	NCBI ID	Target (Regulation)
REG0158	PA14_52570 (RsmA)	T6SS00150	protein	RsmA regulatory pathway	Pseudomonas aeruginosa UCBPP-PA14	chromosome (NC_008463)	4660393..4660578 (-)	489176459	RSMF (↑); tssA1 RNA (↑); RSMA (↑)
REG0159	PA14_RS20260/PA1120 (YfiN/TpbB)	T6SS00150	protein	c-di-GMP regulatory pathway	Pseudomonas aeruginosa UCBPP-PA14	chromosome (NC_008463)	4435431..4436738 (-)	489207392	Hcp1 production (↓)
REG0160	PA14_RS15060 (PA2133 phosphodiesterase)	T6SS00150	protein	c-di-GMP regulatory pathway	Pseudomonas aeruginosa UCBPP-PA14	chromosome (NC_008463)	3294000..3294857 (-)	489200657	Hcp1 production (↑)
REG0161	PA14_RS06615 (WspR)	T6SS00150	protein	c-di-GMP regulatory pathway	Pseudomonas aeruginosa UCBPP-PA14	chromosome (NC_008463)	1413158..1414201 (+)	489183089	Hcp1 production (↓)
REG0162	RsmY	T6SS00150	ncRNA	RsmA regulatory pathway	Pseudomonas aeruginosa UCBPP-PA14	chromosome (NC_008463)	596840..596963 (+)		Unknown
REG0163	RsmZ	T6SS00150	ncRNA	RsmA regulatory pathway	Pseudomonas aeruginosa UCBPP-PA14	chromosome (NC_008463)	1500352..1500467 (+)		Unknown
REG0164	PA14_RS05020 (LadS)	T6SS00150	protein	QS regulatory pathway	Pseudomonas aeruginosa UCBPP-PA14	chromosome (NC_008463)	1069280..1071716 (+)	15599169	Unknown
REG0165	PA14_64230 (RetS)	T6SS00150	protein	QS regulatory pathway	Pseudomonas aeruginosa UCBPP-PA14	chromosome (NC_008463)	5722815..5725643 (+)	489202068	Unknown
REG0166	PA14_45960 (lasR)	T6SS00152 ; T6SS00151 ; T6SS00150	protein	QS regulatory pathway	Pseudomonas aeruginosa UCBPP-PA14	chromosome (NC_008463)	4085339..4086058 (-)	489173455	TssA2 (PA14_43050) promotor (↓); HSI-III transcripts (↓); HSI-I transcripts (↑)
REG0167	PA14_51340 (MvfR)	T6SS00152 ; T6SS00151 ; T6SS00150	protein	QS regulatory pathway	Pseudomonas aeruginosa UCBPP-PA14	chromosome (NC_008463)	4562837..4563835 (+)	489176730	Upstream of pqs operon (↓); HSI-III transcripts (↓); HSI-I transcripts (↑)
REG0168	PA14_51380 (pqsE)	T6SS00150 ; T6SS00152	protein	QS regulatory pathway	Pseudomonas aeruginosa UCBPP-PA14	chromosome (NC_008463)	4566077..4566982 (-)	489176725	T6SS Transciption (↓)
REG0169	PA14_22470 (PA3225)	T6SS00150 ; T6SS00152 ; T6SS00151	protein	Global regulator	Pseudomonas aeruginosa UCBPP-PA14	chromosome (NC_008463)	1955624..1956553 (-)	489182081	PA14_00990 (TssA) promotor (↓); TssA1 (PA14_00990) transcript (↑); TssA2 (PA14_43050) transcript (↑); TssB3 (PA14_34070) transcript (↑)
REG0170	PA14_20290 (AmrZ)	T6SS00150 ; T6SS00152 ; T6SS00151	protein	Global regulator	Pseudomonas aeruginosa UCBPP-PA14	chromosome (NC_008463)	1747602..1747928 (-)	489182353	TssA1 (PA14_00990) promotor (↓); TssA2 (PA14_43050) promotor (↑); TssB3 (PA14_34070) promotor (↓)
REG0172	PA14_48150 (QslA)	T6SS00152	protein	QS regulatory pathway	Pseudomonas aeruginosa UCBPP-PA14	chromosome (NC_008463)	4286222..4286536 (+)	489177206	H2-T6SS (PA14_43050) promotor (↑)

Experimental investigation has been performed.
Bioinformatics investigation has been performed

Effector ID	Locus tag (Gene)	Classification	Cognate immunity protein	Related T6SS	Organism	Replicon (Accession)	Coordinates (Strand)	NCBI ID
EFF01038	PA14_01140 (Tas1)	Tas	IMU00310	T6SS00150	Pseudomonas aeruginosa UCBPP-PA14	chromosome (NC_008463)	111195..112577 (-)	116053814
EFF01816	PA14_01200 (Tse7)	Tde	-	T6SS00150	Pseudomonas aeruginosa UCBPP-PA14	chromosome (NC_008463)	118146..119237 (+)	489228633
EFF01817	PA14_03220 (VgrG2b)	Tpe	-	T6SS00151	Pseudomonas aeruginosa UCBPP-PA14	chromosome (NC_008463)	285213..288272 (-)	489228784
EFF00183	PA14_01030 (hcp1)	-	-	T6SS00150	Pseudomonas aeruginosa UCBPP-PA14	chromosome (NC_008463)	101003..101491 (+)	489174134
EFF00186	PA14_03240 (hcp2)	-	-	T6SS00152	Pseudomonas aeruginosa UCBPP-PA14	chromosome (NC_008463)	288454..288972 (-)	116053976
EFF01822	PA14_34030 (hcp3)	-	-	T6SS00151	Pseudomonas aeruginosa UCBPP-PA14	chromosome (NC_008463)	3027086..3027583 (-)	489180008

Experimental investigation has been performed.
Bioinformatics investigation has been performed

Immunity protein ID	Locus tag (Gene)	Related T6SS	Organism	Replicon (Accession)	Coordinates (Strand)	Protein GI	Cognate effector
IMU00310	PA14_01130 (Tis1)	T6SS00150	Pseudomonas aeruginosa UCBPP-PA14	chromosome (NC_008463)	110972..111205 (-)	489174153	EFF01822

Experimental investigation has been performed.
Bioinformatics investigation has been performed

ID	Locus tag (Gene)	Organism	Replicon (Accession)	Coordinates (Strand)	Protein GI	Response to T6SS attack	Known or putative function

Experimental investigation has been performed.
Bioinformatics investigation has been performed

Accessory protein ID	Locus tag (Gene)	Related T6SS	Type	Organism	Replicon (Accession)	Coordinates (Strand)	Protein GI	Related structure protein	Related effector