Detailed information NTG0099093

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: SP4011_RS01800
• Genome accession: NZ_AP026968
• Coordinates: 329385..330551 (+)
• Length: 388 a.a.
• NCBI ID: WP_050234077.1
• Uniprot ID: -
• Organism: Streptococcus parapneumoniae strain SP4011
• Function: homologous recombination (predicted from homology) Homologous recombination

Related MGE

Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type	MGE coordinates	Gene coordinates	Relative position	Distance (bp)
Genomic island	324036..336529	329385..330551	within	0

Gene organization within MGE regions

Location: 324036..336529

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SP4011_RS01770 (SP4011_03110)	-	324036..324899 (+)	864	WP_338619590.1	helix-turn-helix transcriptional regulator	-
SP4011_RS01775 (SP4011_03120)	comM	325205..325825 (+)	621	WP_338619592.1	hypothetical protein	Regulator
SP4011_RS01780 (SP4011_03130)	tsaE	326015..326458 (+)	444	WP_338619594.1	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE	-
SP4011_RS01785 (SP4011_03140)	-	326448..326966 (+)	519	WP_061425432.1	GNAT family N-acetyltransferase	-
SP4011_RS01790 (SP4011_03150)	brpA	326974..327990 (+)	1017	WP_338619597.1	biofilm formation/cell division transcriptional regulator BrpA	-
SP4011_RS01795 (SP4011_03160)	cinA	328074..329330 (+)	1257	WP_112445114.1	competence/damage-inducible protein A	Machinery gene
SP4011_RS01800 (SP4011_03170)	recA	329385..330551 (+)	1167	WP_050234077.1	recombinase RecA	Machinery gene
SP4011_RS01805 (SP4011_03180)	-	330666..332036 (+)	1371	WP_338619599.1	MATE family efflux transporter	-
SP4011_RS01810 (SP4011_03190)	-	332412..333362 (+)	951	WP_338619601.1	N-acetylmuramoyl-L-alanine amidase family protein	-
SP4011_RS01815 (SP4011_03200)	-	333733..334077 (+)	345	WP_261144334.1	helix-turn-helix domain-containing protein	-
SP4011_RS01820 (SP4011_03210)	-	334090..334836 (+)	747	WP_338620384.1	ImmA/IrrE family metallo-endopeptidase	-
SP4011_RS01825 (SP4011_03220)	-	334829..335251 (+)	423	Protein_327	hypothetical protein	-
SP4011_RS01830 (SP4011_03230)	-	336026..336529 (+)	504	WP_175880460.1	PBECR4 domain-containing protein	-

Sequence

Protein

• Length: 388 a.a.
• Molecular weight: 41800.50 Da
• Isoelectric Point: 4.7733

>NTDB_id=99093 SP4011_RS01800 WP_050234077.1 329385..330551(+) (recA) [Streptococcus parapneumoniae strain SP4011]
MAKKPKKLDEISKKFGAEREKALNDALKLIEKDFGKGSIMRLGERAEQKVQVMSSGSLALDIALGSGGYPKGRIIEIYGP
ESSGKTTVALHAVAQAQKEGGIAAFIDAEHALDPAYAAALGVNIDELLLSQPDSGEQGLEIAGKLIDSGAVDLVVVDSVA
ALVPRAEIDGDIGDSHVGLQARMMSQAMRKLGASINKTKTIAIFINQLREKVGVMFGNPETTPGGRALKFYASVRLDVRG
NTQIKGTGDQKETNVGKETKIKVVKNKVAPPFKEAVVEIMYGEGISKTGELLKIASDLDIIKKAGAWYSYKDEKIGQGSE
NAKKYLAEHPEIFDEIDKQVRSKFGLIDGEEASEQDTENKKDEAVQADSVNEEVTLDLGDELEIEIEE

Nucleotide

• Length: 1167 bp

>NTDB_id=99093 SP4011_RS01800 WP_050234077.1 329385..330551(+) (recA) [Streptococcus parapneumoniae strain SP4011]
ATGGCGAAAAAACCAAAAAAATTAGATGAAATTTCAAAAAAATTTGGGGCAGAACGTGAAAAAGCCTTGAATGACGCTCT
TAAATTGATTGAGAAAGACTTTGGTAAAGGATCAATCATGCGTTTGGGTGAACGTGCCGAGCAAAAGGTGCAAGTGATGA
GTTCAGGTTCTTTGGCTCTTGACATTGCCCTTGGTTCAGGTGGTTATCCTAAGGGACGTATCATTGAAATCTATGGGCCA
GAGTCATCTGGTAAGACAACGGTTGCCCTTCATGCAGTTGCGCAAGCGCAAAAAGAAGGTGGGATTGCAGCCTTTATCGA
TGCGGAGCATGCCCTCGATCCAGCTTATGCTGCGGCTCTTGGTGTTAATATTGACGAATTACTCTTGTCTCAACCAGACT
CAGGAGAACAAGGTCTTGAGATTGCAGGAAAATTGATTGACTCAGGTGCTGTAGATCTTGTCGTGGTTGACTCAGTTGCA
GCCCTTGTCCCTCGTGCGGAAATTGATGGAGATATCGGAGATAGCCACGTTGGTTTGCAGGCTCGTATGATGAGTCAGGC
CATGCGTAAATTGGGTGCCTCTATCAATAAAACCAAAACAATTGCCATCTTTATCAACCAATTGCGTGAAAAAGTTGGGG
TCATGTTTGGAAATCCAGAAACAACTCCTGGTGGACGTGCTTTGAAATTCTATGCTTCAGTCCGTTTGGATGTTCGTGGT
AATACACAAATTAAGGGAACTGGTGACCAAAAAGAAACCAATGTCGGTAAAGAAACTAAGATTAAGGTTGTAAAAAACAA
GGTAGCTCCACCGTTTAAGGAAGCCGTAGTTGAAATTATGTACGGAGAAGGAATTTCTAAGACTGGTGAACTCTTGAAGA
TTGCAAGCGACTTGGATATTATCAAAAAAGCAGGGGCTTGGTATTCTTACAAGGATGAAAAAATTGGGCAAGGTTCTGAG
AATGCTAAGAAATACTTGGCAGAGCACCCAGAAATCTTTGATGAAATTGATAAGCAAGTCCGTTCTAAATTTGGCTTGAT
TGACGGAGAAGAAGCTTCAGAACAAGATACTGAAAACAAAAAAGATGAAGCAGTTCAAGCAGATTCTGTGAATGAAGAAG
TCACACTTGACCTAGGTGATGAACTTGAAATCGAAATTGAAGAATAA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (21-286)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Streptococcus pneumoniae Rx1	97.68	100	0.977
recA	Streptococcus pneumoniae D39	97.68	100	0.977
recA	Streptococcus pneumoniae R6	97.68	100	0.977
recA	Streptococcus pneumoniae TIGR4	97.68	100	0.977
recA	Streptococcus mitis NCTC 12261	95.619	100	0.956
recA	Streptococcus mitis SK321	95.103	100	0.951
recA	Streptococcus mutans UA159	82.597	99.227	0.82
recA	Streptococcus pyogenes NZ131	90.435	88.918	0.804
recA	Lactococcus lactis subsp. cremoris KW2	78.409	90.722	0.711
recA	Latilactobacillus sakei subsp. sakei 23K	66.479	91.495	0.608
recA	Bacillus subtilis subsp. subtilis str. 168	68.788	85.052	0.585
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	64.706	83.247	0.539
recA	Glaesserella parasuis strain SC1401	60.641	88.402	0.536
recA	Vibrio cholerae strain A1552	62.848	83.247	0.523
recA	Vibrio cholerae O1 biovar El Tor strain E7946	62.848	83.247	0.523
recA	Acinetobacter baumannii D1279779	61.963	84.021	0.521
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	60.725	85.309	0.518
recA	Neisseria gonorrhoeae MS11	59.821	86.598	0.518
recA	Neisseria gonorrhoeae strain FA1090	59.821	86.598	0.518
recA	Neisseria gonorrhoeae MS11	59.821	86.598	0.518
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	58.824	87.629	0.515
recA	Acinetobacter baylyi ADP1	61.35	84.021	0.515
recA	Pseudomonas stutzeri DSM 10701	59.509	84.021	0.5
recA	Helicobacter pylori 26695	58.359	84.794	0.495
recA	Helicobacter pylori strain NCTC11637	58.359	84.794	0.495
recA	Ralstonia pseudosolanacearum GMI1000	59.937	81.701	0.49